prot_L-digitata_M_contig99002.3.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99002.3.1
Unique Nameprot_L-digitata_M_contig99002.3.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length37
Homology
[Close]
BLAST of mRNA_L-digitata_M_contig99002.3.1 vs. uniprot
Match: A0A6N2D2D9_9DELT (FHA domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6N2D2D9_9DELT)

HSP 1 Score: 49.7 bits (117), Expect = 7.710e-6
Identity = 22/34 (64.71%), Postives = 26/34 (76.47%), Query Frame = 0 
Query:    3 WTLRGGKLTLGRDPERCDIPLDDTKASREHAQLV 36
            W+ RG  L LGRDPERCDI LDD + SREHA++ 
Sbjct:  363 WSTRG-VLVLGRDPERCDIVLDDVQISREHARIA 395
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99002.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6N2D2D9_9DELT7.710e-664.71FHA domain-containing protein n=1 Tax=Deltaproteob... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 11..37
e-value: 8.2E-6
score: 26.1
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 10..37
score: 10.1599
IPR000253Forkhead-associated (FHA) domainCDDcd00060FHAcoord: 1..37
e-value: 9.86946E-9
score: 43.9142
NoneNo IPR availableGENE3D2.60.200.20coord: 1..37
e-value: 2.2E-9
score: 39.0
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 2..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99002contigL-digitata_M_contig99002:837..947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99002.3.1mRNA_L-digitata_M_contig99002.3.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99002 837..947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99002.3.1 ID=prot_L-digitata_M_contig99002.3.1|Name=mRNA_L-digitata_M_contig99002.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=37bp
RRWTLRGGKLTLGRDPERCDIPLDDTKASREHAQLVY
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR008984SMAD_FHA_dom_sf