prot_L-digitata_M_contig98604.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98604.1.1
Unique Nameprot_L-digitata_M_contig98604.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length127
Homology
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Match: A0A222E5L9_9RHOB (Uracil-DNA glycosylase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E5L9_9RHOB)

HSP 1 Score: 263 bits (673), Expect = 6.240e-88
Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 0
Query:    1 MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQVLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTPERP 127
            MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAG HAKLGWS LTEQVLAALS+QPRAFLLWGAHAQGFAKHI GPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTPERP
Sbjct:   96 MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGAHAKLGWSSLTEQVLAALSNQPRAFLLWGAHAQGFAKHIAGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTPERP 222          
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Match: A0A238L0G9_9RHOB (Uracil-DNA glycosylase n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238L0G9_9RHOB)

HSP 1 Score: 236 bits (601), Expect = 5.300e-77
Identity = 109/125 (87.20%), Postives = 116/125 (92.80%), Query Frame = 0
Query:    1 MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQVLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTPE 125
            MQ+DLGA PP+GDLRFWA QGVLLLNTALTVEAG+AGVHA LGWSRLTEQVLAALSD+PRAF+LWG HAQGFA HI+GP HLIL S HPSPLSARRGFFGSRPFSR+NDWLKD GQTPINWTTPE
Sbjct:   94 MQDDLGARPPDGDLRFWATQGVLLLNTALTVEAGRAGVHANLGWSRLTEQVLAALSDRPRAFVLWGNHAQGFAPHISGPGHLILNSAHPSPLSARRGFFGSRPFSRVNDWLKDKGQTPINWTTPE 218          
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Match: A0A0B3SAR8_9RHOB (Uracil-DNA glycosylase n=10 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A0B3SAR8_9RHOB)

HSP 1 Score: 232 bits (592), Expect = 1.240e-75
Identity = 107/127 (84.25%), Postives = 115/127 (90.55%), Query Frame = 0
Query:    1 MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQVLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTPERP 127
            M +DLGA P  GDL FWA+QGVLLLNTALTVEAGKAG HAKLGW+RLTEQVLAALSD+PRAFLLWG HAQGFA+HITG DHL+L+S HPSPLSARRGFFGSRPFSRINDWL D GQTPINWTTP+ P
Sbjct:   96 MTDDLGACPDTGDLHFWADQGVLLLNTALTVEAGKAGAHAKLGWARLTEQVLAALSDRPRAFLLWGGHAQGFARHITGGDHLVLSSAHPSPLSARRGFFGSRPFSRINDWLMDKGQTPINWTTPKGP 222          
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Match: A0A0W7WQE5_9RHOB (Uracil-DNA glycosylase n=1 Tax=Ponticoccus marisrubri TaxID=1685382 RepID=A0A0W7WQE5_9RHOB)

HSP 1 Score: 223 bits (567), Expect = 7.380e-72
Identity = 103/124 (83.06%), Postives = 110/124 (88.71%), Query Frame = 0
Query:    1 MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQVLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTP 124
            M EDLGA PP+GDLRFWA QGVLLLNTALTV AG+AG HA+LGWSRLTE+VLA LSD+PRAFLLWG HAQGFA+HITG DHL+L S HPSPLSARRGFFGSRPFSRINDWLK  G TPINWT P
Sbjct:   94 MTEDLGACPPDGDLRFWAPQGVLLLNTALTVPAGRAGGHARLGWSRLTEEVLATLSDRPRAFLLWGNHAQGFARHITGADHLVLRSAHPSPLSARRGFFGSRPFSRINDWLKARGDTPINWTVP 217          
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Match: UPI000EF50915 (uracil-DNA glycosylase n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF50915)

HSP 1 Score: 219 bits (559), Expect = 1.210e-70
Identity = 101/127 (79.53%), Postives = 108/127 (85.04%), Query Frame = 0
Query:    1 MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQVLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTPERP 127
            +Q+DLGA PP+GDL FWA QGVLLLNTALTV  G+AG HAKLGWS LTEQVL  L D PRAF+LWG HAQGFAKH+T PDHLIL S HPSPLSAR+GFFGSRPFSRINDWLK  G TPINWTTPE P
Sbjct:   94 LQDDLGACPPDGDLHFWANQGVLLLNTALTVLPGQAGAHAKLGWSTLTEQVLTKLDDSPRAFVLWGNHAQGFAKHLTHPDHLILRSAHPSPLSARKGFFGSRPFSRINDWLKARGDTPINWTTPEAP 220          
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Match: A0A2U8HFS6_9RHOB (Uracil-DNA glycosylase n=7 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A2U8HFS6_9RHOB)

HSP 1 Score: 218 bits (556), Expect = 3.150e-70
Identity = 100/124 (80.65%), Postives = 108/124 (87.10%), Query Frame = 0
Query:    1 MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQVLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTP 124
            +QE+ GA+PPNGDLRFWA QGVLLLNTAL+V AG AG HAKLGWS LT QVL ALSDQPRAF+LWG HAQ FA +I G DHLILTS HPSPLSARRGFFGSRPFSR+NDWLK  G+TPINWTTP
Sbjct:   91 LQEEFGAVPPNGDLRFWARQGVLLLNTALSVPAGNAGAHAKLGWSTLTAQVLEALSDQPRAFILWGGHAQKFAPYIRGEDHLILTSAHPSPLSARRGFFGSRPFSRVNDWLKARGETPINWTTP 214          
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Match: A0A1B1PKK5_9RHOB (Uracil-DNA glycosylase n=2 Tax=unclassified Salipiger TaxID=2640570 RepID=A0A1B1PKK5_9RHOB)

HSP 1 Score: 218 bits (554), Expect = 5.760e-70
Identity = 100/124 (80.65%), Postives = 107/124 (86.29%), Query Frame = 0
Query:    1 MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQVLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTP 124
            +QE+ GA+PPNGDLRFWA QGVLLLNTAL+V AG AG HAKLGWS LT QVL ALSD+PRAF+LWG HAQ FAKHI G DHLIL S HPSPLSARRGFFGSRPFSR+NDWLK  G TPINWTTP
Sbjct:   91 LQEEFGAVPPNGDLRFWARQGVLLLNTALSVPAGNAGAHAKLGWSGLTAQVLDALSDKPRAFILWGGHAQKFAKHIHGDDHLILASAHPSPLSARRGFFGSRPFSRVNDWLKARGDTPINWTTP 214          
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Match: UPI001C95F55B (uracil-DNA glycosylase n=3 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C95F55B)

HSP 1 Score: 217 bits (552), Expect = 1.450e-69
Identity = 102/118 (86.44%), Postives = 105/118 (88.98%), Query Frame = 0
Query:    5 LGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQVLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWT 122
            LG  P NGDLR WA QGVLLLNTALTVEAGKAG HA+LGWS+LTEQVLA LSD PRAFLLWG HAQGFA+HITG  HLILTS HPSPLSARRGFFGSRPFSRINDWLKD GQTPINWT
Sbjct:   99 LGGAPENGDLRPWASQGVLLLNTALTVEAGKAGAHARLGWSKLTEQVLATLSDHPRAFLLWGNHAQGFARHITGDGHLILTSAHPSPLSARRGFFGSRPFSRINDWLKDRGQTPINWT 216          
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Match: Q0FPZ4_SALBH (Uracil-DNA glycosylase n=6 Tax=Roseobacteraceae TaxID=2854170 RepID=Q0FPZ4_SALBH)

HSP 1 Score: 216 bits (549), Expect = 3.770e-69
Identity = 100/127 (78.74%), Postives = 106/127 (83.46%), Query Frame = 0
Query:    1 MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQVLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTPERP 127
            ++ + GA PP  DLRFWA QGVLLLNTALTV AG AG HAKLGWSRLTEQVL  LS+ PRAF+LWG HAQGFAKHITG DHLIL S HPSPLSARRGFFGSRPFSR+NDWL   G TPINWTTPE P
Sbjct:   91 LEAEFGACPPTADLRFWAAQGVLLLNTALTVPAGSAGAHAKLGWSRLTEQVLETLSETPRAFILWGNHAQGFAKHITGGDHLILRSAHPSPLSARRGFFGSRPFSRVNDWLIARGDTPINWTTPEAP 217          
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Match: A0A0P1GQK5_9RHOB (Uracil-DNA glycosylase n=2 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1GQK5_9RHOB)

HSP 1 Score: 215 bits (548), Expect = 6.090e-69
Identity = 100/124 (80.65%), Postives = 106/124 (85.48%), Query Frame = 0
Query:    1 MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQVLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFGSRPFSRINDWLKDGGQTPINWTTP 124
            +  + GA+PPNGDL FWAEQGVLLLNTALTV  G+AGVHAKLGW+ LT QVLA LS  PRAFLLWG HAQGFAKHITG +HLILTS HPSPLSARRGFFGSRPFSRIN WLK  G TPINWTTP
Sbjct:   98 LDAEFGAVPPNGDLHFWAEQGVLLLNTALTVLPGQAGVHAKLGWAELTRQVLADLSQSPRAFLLWGNHAQGFAKHITGDNHLILTSAHPSPLSARRGFFGSRPFSRINAWLKANGDTPINWTTP 221          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98604.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E5L9_9RHOB6.240e-8896.85Uracil-DNA glycosylase n=3 Tax=Roseobacteraceae Ta... [more]
A0A238L0G9_9RHOB5.300e-7787.20Uracil-DNA glycosylase n=1 Tax=Maliponia aquimaris... [more]
A0A0B3SAR8_9RHOB1.240e-7584.25Uracil-DNA glycosylase n=10 Tax=Roseobacteraceae T... [more]
A0A0W7WQE5_9RHOB7.380e-7283.06Uracil-DNA glycosylase n=1 Tax=Ponticoccus marisru... [more]
UPI000EF509151.210e-7079.53uracil-DNA glycosylase n=1 Tax=Tropicibacter sp. L... [more]
A0A2U8HFS6_9RHOB3.150e-7080.65Uracil-DNA glycosylase n=7 Tax=Roseobacteraceae Ta... [more]
A0A1B1PKK5_9RHOB5.760e-7080.65Uracil-DNA glycosylase n=2 Tax=unclassified Salipi... [more]
UPI001C95F55B1.450e-6986.44uracil-DNA glycosylase n=3 Tax=Rhodobacterales Tax... [more]
Q0FPZ4_SALBH3.770e-6978.74Uracil-DNA glycosylase n=6 Tax=Roseobacteraceae Ta... [more]
A0A0P1GQK5_9RHOB6.090e-6980.65Uracil-DNA glycosylase n=2 Tax=Tropicibacter napht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 1..126
e-value: 4.4E-46
score: 159.4
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 5..123
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 16..111
e-value: 1.8E-13
score: 50.7
IPR002043Uracil-DNA glycosylase family 1PANTHERPTHR11264URACIL-DNA GLYCOSYLASEcoord: 7..122
IPR002043Uracil-DNA glycosylase family 1CDDcd10027UDG-F1-likecoord: 1..121
e-value: 5.7218E-71
score: 209.228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98604contigL-digitata_M_contig98604:1..381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98604.1.1mRNA_L-digitata_M_contig98604.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98604 1..941 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98604.1.1 ID=prot_L-digitata_M_contig98604.1.1|Name=mRNA_L-digitata_M_contig98604.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=127bp
MQEDLGAIPPNGDLRFWAEQGVLLLNTALTVEAGKAGVHAKLGWSRLTEQ
VLAALSDQPRAFLLWGAHAQGFAKHITGPDHLILTSPHPSPLSARRGFFG
SRPFSRINDWLKDGGQTPINWTTPERP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036895Uracil-DNA_glycosylase-like_sf
IPR005122Uracil-DNA_glycosylase-like
IPR002043UDG_fam1