prot_L-digitata_M_contig98582.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98582.2.1
Unique Nameprot_L-digitata_M_contig98582.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length103
Homology
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 7.480e-28
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVANCVPAPKPLVAKCYGTRPADV----------TIACSSGVQQGDAMGPAIFCPELRPGLKRFR 101
            QFGVAV GGVE V + A+ +H+TG+W+V+TDCSNAFNT KRTA++ + A  VP     +A+CY   PA            TI C SGVQQGD MGP +FC  L P + + R
Sbjct:  113 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLR 223          
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.870e-26
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVANCVPAPKPLVAKCYGTRPADV----------TIACSSGVQQGDAMGPAIFCPELRPGLKRFR 101
            QFGVAV GGVE V + A+ +H+TG+W+V+TDCSNAFNT KRTA++ + A  VP     +A+CY   PA            TI C SGVQQGD MGP +FC  L P + + R
Sbjct:  112 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLR 222          
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 3.330e-26
Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = 0
Query:    1 QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVANCVPAPKPLVAKCYGTRPADV----------TIACSSGVQQGDAMGPAIFCPELRPGLKRFR 101
            QFGVAV GGVE V + A+ +H+TG+W+V+TDCSNAFNT KRTA++ + A  VP     +A+CY   PA            TI C  GVQQGD MGP +FC  L P + + R
Sbjct:  203 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLR 313          
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.660e-26
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVANCVPAPKPLVAKCYGTRPADV----------TIACSSGVQQGDAMGPAIFCPELRPGLKRFR 101
            QFGVAV GGVE V + A+ +H+TG+W+V+TDCSNAFNT KRTA++ + A  VP     +A+CY   PA            TI C SGVQQGD MGP +FC  L P + + R
Sbjct:  488 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLKLR 598          
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.670e-26
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVANCVPAPKPLVAKCYGTRPADV----------TIACSSGVQQGDAMGPAIFCPELRPGLKRFR 101
            QFGVAV GGVE V + A+ +H+TG+W+V+TDCSNAFNT KRTA++ + A  VP     +A+CY   PA            TI C SGVQQGD MGP +FC  L P + + R
Sbjct:  502 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLR 612          
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.730e-26
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVANCVPAPKPLVAKCYGTRPADV----------TIACSSGVQQGDAMGPAIFCPELRPGLKRFR 101
            QFGVAV GGVE V + A+ +H+TG+W+V+TDCSNAFNT KRTA++ + A  VP     +A+CY   PA            TI C SGVQQGD MGP +FC  L P + + R
Sbjct:  481 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLR 591          
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Match: A0A6H5KAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK8_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 6.760e-26
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVANCVPAPKPLVAKCYGTRPADV----------TIACSSGVQQGDAMGPAIFCPELRPGLKRFR 101
            QFGVAV GGVE V + A+ +H+TG+W+V+TDCSNAFNT KRTA++ + A  VP     +A+CY   PA            TI C SGVQQGD MGP +FC  L P + + R
Sbjct:  431 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKNVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLR 541          
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 9.240e-26
Identity = 55/111 (49.55%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVANCVPAPKPLVAKCYGTRPADV----------TIACSSGVQQGDAMGPAIFCPELRPGLKRFR 101
            QFGVAV GGVE V + A+ +H+TG+W+V+TDCSNAFNT KRTA++ + +  VP     +A+CY   PA            TI C SGVQQGD MGP +FC  L P + + R
Sbjct:  480 QFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLR 590          
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.700e-25
Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = 0
Query:    1 QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVANCVPAPKPLVAKCYGTRPADV----------TIACSSGVQQGDAMGPAIFCPELRPGLKRFR 101
            QFG AV GGVE V + A+ +H+TG+W+V+TDCSNAFNT KRTA++ + A  VP     +A+CY   PA            TI C SGVQQGD MGP +FC  L P + + R
Sbjct:   28 QFGAAVVGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLR 138          
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 2.760e-25
Identity = 54/111 (48.65%), Postives = 70/111 (63.06%), Query Frame = 0
Query:    1 QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVANCVPAPKPLVAKCYGTRPADV----------TIACSSGVQQGDAMGPAIFCPELRPGLKRFR 101
            QFGVAV GGVE V + A+ +H+TG+W+V+TDCS+AFNT KRT ++ + A  VP     +A+CY   PA            TI C SGVQQGD MGP +FC  L P + + R
Sbjct:  105 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLR 215          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98582.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Y4_9PHAE7.480e-2850.45Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE1.870e-2650.45Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KR59_9PHAE3.330e-2649.55Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KA96_9PHAE3.660e-2650.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI32_9PHAE3.670e-2650.45Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE3.730e-2650.45Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KAK8_9PHAE6.760e-2650.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKQ2_9PHAE9.240e-2649.55Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE1.700e-2549.55Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0V7_9PHAE2.760e-2548.65Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98582contigL-digitata_M_contig98582:566..903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98582.2.1mRNA_L-digitata_M_contig98582.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98582 566..903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98582.2.1 ID=prot_L-digitata_M_contig98582.2.1|Name=mRNA_L-digitata_M_contig98582.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=103bp
QFGVAVPGGVEHVGLRARTLHETGNWLVRTDCSNAFNTVKRTAVLKEVAN
CVPAPKPLVAKCYGTRPADVTIACSSGVQQGDAMGPAIFCPELRPGLKRF
RQE
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