prot_L-digitata_M_contig98553.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98553.1.1
Unique Nameprot_L-digitata_M_contig98553.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length224
Homology
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Match: UPI0019035863 (iron ABC transporter permease n=1 Tax=Thiohalocapsa halophila TaxID=69359 RepID=UPI0019035863)

HSP 1 Score: 327 bits (838), Expect = 1.910e-106
Identity = 157/219 (71.69%), Postives = 187/219 (85.39%), Query Frame = 0
Query:    6 HRKAPIVYISIGIAALIIVPIIGVIWNVFQPGQGNWPHLASTVLPDYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVPAFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTSVLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVTGIALSLMETLADFGTVAHFGIPTF 224
             R+  + YIS+ +AAL  VP++GV+ NVF+ GQGNWPHL STVLPDY++NSL LM+GVG GV + GT  AWLVVM RFPGRR FEW L+LPLA+PA+VVAYAYTD LQ +GPVQTLLRDLTG   +DY+FPNIRS GGAI++F++VL PYVYLLAR AFL+QS+CALEV RTLGRTP  +F  +ALP+ARPAIVTG+AL+LMETLADFGTVAHFG+PTF
Sbjct:   19 RRRFSMAYISVAVAALFSVPLLGVVLNVFREGQGNWPHLVSTVLPDYVMNSLALMLGVGAGVVIGGTGTAWLVVMCRFPGRRLFEWMLVLPLAIPAYVVAYAYTDLLQHAGPVQTLLRDLTGLGPRDYWFPNIRSTGGAILVFSAVLYPYVYLLARTAFLQQSVCALEVGRTLGRTPWGAFTSIALPLARPAIVTGMALALMETLADFGTVAHFGVPTF 237          
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Match: UPI000731F5C6 (iron ABC transporter permease n=1 Tax=Thiohalocapsa sp. ML1 TaxID=1431688 RepID=UPI000731F5C6)

HSP 1 Score: 327 bits (837), Expect = 2.770e-106
Identity = 156/221 (70.59%), Postives = 188/221 (85.07%), Query Frame = 0
Query:    4 RLHRKAPIVYISIGIAALIIVPIIGVIWNVFQPGQGNWPHLASTVLPDYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVPAFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTSVLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVTGIALSLMETLADFGTVAHFGIPTF 224
            R   + P+  +S+ +AAL  VP++GV++N+F+ GQGNW HL STVLPDY+LNSL LM+G G+GV + GT  AWLVVM RFPGRR FEW L+LPLA+PA+VVAYAYTD LQ +GPVQTLLRDLTGW  +DY+FPNIRS+GGA+V+F++VL PYVYLLAR AFL+QSICALEV RTLGRTP   F  +ALP+ARPAIVTG+AL+LMETLADFGTVAHFG+PTF
Sbjct:   13 RRRPRLPLAALSVVVAALFSVPVLGVLFNMFREGQGNWAHLVSTVLPDYVLNSLVLMLGAGVGVVIGGTGTAWLVVMCRFPGRRLFEWMLVLPLAIPAYVVAYAYTDLLQHAGPVQTLLRDLTGWGPRDYWFPNIRSVGGAVVVFSAVLYPYVYLLARTAFLQQSICALEVGRTLGRTPWGGFWSIALPLARPAIVTGMALALMETLADFGTVAHFGVPTF 233          
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Match: UPI000E5C728E (iron ABC transporter permease n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5C728E)

HSP 1 Score: 291 bits (746), Expect = 1.010e-92
Identity = 148/222 (66.67%), Postives = 175/222 (78.83%), Query Frame = 0
Query:    3 PRLHRKAPIVYISIGIAALIIVPIIGVIWNVFQPGQGNWPHLASTVLPDYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVPAFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTSVLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVTGIALSLMETLADFGTVAHFGIPTF 224
            PRL     +   ++ +A L+ +P++GV  ++FQ   G W HLA TVLPD+I+N+L L V VG GV LVG A AWLV M RFPGRR FEWALILPLA PA+V+AYAYTDFLQ  GPVQTLLR+LTGW  +DY+FP IRS+ GA ++FT VL PYVYLLAR AFL QS+CALEVSRTLGR+   SF  VA+P+ARPAIVTG AL+LMETLADFGTVAHFG+PTF
Sbjct:   29 PRLKSGTWLTATAVAVAGLLALPVLGVFASLFQRSDGAWQHLAETVLPDFIVNTLYLTVLVGGGVLLVGVATAWLVTMCRFPGRRLFEWALILPLAFPAYVIAYAYTDFLQHPGPVQTLLRELTGWGPRDYWFPQIRSIEGAGLMFTLVLYPYVYLLARTAFLNQSVCALEVSRTLGRSAWSSFRHVAMPLARPAIVTGTALALMETLADFGTVAHFGVPTF 250          
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Match: UPI001F0E7BBD (iron ABC transporter permease n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI001F0E7BBD)

HSP 1 Score: 290 bits (742), Expect = 1.680e-92
Identity = 136/212 (64.15%), Postives = 174/212 (82.08%), Query Frame = 0
Query:   13 YISIGIAALIIVPIIGVIWNVFQPGQGNWPHLASTVLPDYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVPAFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTSVLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVTGIALSLMETLADFGTVAHFGIPTF 224
            ++S+ +A L ++PIIGV+ ++ QP    W HLASTVLP Y++N+  L++GVGLGV ++GT  AWLV M RFPGRRFFEWALILPLAVPA+V+AYAYTDFLQ +G VQTLLRD+TG S+++Y+FP +RS+GGA+ +   VL PY Y+L+R AFL+QS+CAL+VSRTLG  P RSF  +ALP+ARPAIV G AL+LMETLADFGTV+ FG+P F
Sbjct:    3 WLSVAVAGLFLIPIIGVLMSLAQPSSATWTHLASTVLPRYLVNTAVLVLGVGLGVPIIGTGTAWLVTMCRFPGRRFFEWALILPLAVPAYVIAYAYTDFLQPAGSVQTLLRDMTGLSYREYWFPEVRSLGGAVAMLVLVLYPYAYMLSRTAFLDQSVCALDVSRTLGCGPWRSFFRIALPLARPAIVAGTALALMETLADFGTVSFFGVPNF 214          
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Match: UPI001D043CF1 (iron ABC transporter permease n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001D043CF1)

HSP 1 Score: 288 bits (736), Expect = 1.930e-91
Identity = 137/216 (63.43%), Postives = 175/216 (81.02%), Query Frame = 0
Query:    9 APIVYISIGIAALIIVPIIGVIWNVFQPGQGNWPHLASTVLPDYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVPAFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTSVLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVTGIALSLMETLADFGTVAHFGIPTF 224
            AP+ ++SI +A L +VP++ V++++ Q G G W HLASTVLP Y+ N+  L+ GVG+GV L+G   AWLV M RFPGRR FEWALILPLAVPA+V+AYAYTDFLQ +GPVQTLLRDLTG S+++Y+FP +RS+GGA+ + T VL PY Y+L+R AFL+QS+CAL+VSRTLG  P  +F  VALP+ARPAI+ G AL+LMETLADFGTV+ FG+P F
Sbjct:    6 APLTWLSIAVAGLFLVPVVSVLFSLTQSGDGTWSHLASTVLPRYLFNTAVLVGGVGIGVPLLGAGTAWLVTMCRFPGRRVFEWALILPLAVPAYVMAYAYTDFLQPAGPVQTLLRDLTGLSYREYWFPEVRSLGGAVAMLTLVLYPYAYMLSRAAFLDQSVCALDVSRTLGCGPWATFFRVALPLARPAIIAGTALALMETLADFGTVSFFGVPNF 221          
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Match: UPI001FB27112 (iron ABC transporter permease n=1 Tax=Orrella sp. f23 TaxID=2782176 RepID=UPI001FB27112)

HSP 1 Score: 286 bits (733), Expect = 4.900e-91
Identity = 139/219 (63.47%), Postives = 171/219 (78.08%), Query Frame = 0
Query:    6 HRKAPIVYISIGIAALIIVPIIGVIWNVFQPGQGNWPHLASTVLPDYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVPAFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTSVLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVTGIALSLMETLADFGTVAHFGIPTF 224
            +R +   +++I I   + +P+I ++ +VFQ GQGNWPHL  TVLP Y++NSL L   VGLGVGL+G   AWLVVM +FPGRR FEWALILPLA+PA+VVAYAYTD LQ SGPVQ   R++TG  F +Y+FP IRS+GGAI +F  VL PYVYLLAR AFLEQS+  LE SR LG+TPL +F  +ALP+ARPAIV G++L+LMETLADFGTV HFG+ TF
Sbjct:    5 YRPSAAAWLAILIGLTLSLPLISIVLSVFQQGQGNWPHLVETVLPRYVVNSLYLTAAVGLGVGLIGVGCAWLVVMCQFPGRRLFEWALILPLAMPAYVVAYAYTDVLQSSGPVQVWWREMTGLRFGEYWFPQIRSLGGAITVFIFVLYPYVYLLARTAFLEQSVATLEASRMLGKTPLGAFQKIALPLARPAIVVGVSLALMETLADFGTVFHFGVQTF 223          
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Match: UPI00037A8C55 (iron ABC transporter permease n=1 Tax=Amorphus coralli TaxID=340680 RepID=UPI00037A8C55)

HSP 1 Score: 276 bits (706), Expect = 7.540e-87
Identity = 136/220 (61.82%), Postives = 170/220 (77.27%), Query Frame = 0
Query:    6 HRKAP-IVYISIGIAALIIVPIIGVIWNVFQPGQGNWPHLASTVLPDYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVPAFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTSVLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVTGIALSLMETLADFGTVAHFGIPTF 224
             RKA  + ++++ ++ +++ PII V+   F  G G W HLA+TVLP Y++N++ L+V V +GV ++GT  AWLV M RFPG+R  EWALILP A PA+V+AYAYTDFLQ  GPVQT LR LTGW  +DY+FP IRS+ GA V+FT VL PYVYLLAR AFL+QS C LEV+RTLGRTP  +F  VALPMARPAI  G++L+LMETLADFGTVAHFG+ TF
Sbjct:   22 RRKAGWLAWVALSVSLVLLSPIIAVVAAAFGAGSGTWAHLAATVLPLYVINTVVLVVAVTVGVFVIGTGTAWLVTMCRFPGKRVLEWALILPFAAPAYVIAYAYTDFLQHPGPVQTWLRALTGWGPRDYWFPEIRSLEGAAVVFTLVLYPYVYLLARAAFLQQSACTLEVARTLGRTPWTAFFRVALPMARPAIAVGVSLALMETLADFGTVAHFGVQTF 241          
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Match: A0A843RKD3_9PROT (ABC transporter permease subunit n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A843RKD3_9PROT)

HSP 1 Score: 273 bits (697), Expect = 7.990e-86
Identity = 130/201 (64.68%), Postives = 162/201 (80.60%), Query Frame = 0
Query:   24 VPIIGVIWNVFQPGQGNWPHLASTVLPDYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVPAFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTSVLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVTGIALSLMETLADFGTVAHFGIPTF 224
            +P+  V++++ Q G G W HLASTVLP Y+ N+  L+ GVG+GV ++G   AWLV M RFPGRR FEWALILPLAVPA+V+AYAYTDFLQ +GPVQTLLRDLTG +++DY+FP IRS+GGA+ +   VL PY Y+L+R AFL+QS+CAL+VSRTLG  P  SF  VALP+ARPAI+ G AL+LMETLADFGTV+ FG+P F
Sbjct:    1 MPVFSVLFSLTQSGGGTWSHLASTVLPGYLFNTAVLVAGVGIGVPVIGAGCAWLVTMCRFPGRRVFEWALILPLAVPAYVMAYAYTDFLQPAGPVQTLLRDLTGLAYRDYWFPEIRSLGGAVAMLVLVLYPYAYMLSRAAFLDQSVCALDVSRTLGCGPWSSFFRVALPLARPAIIAGTALALMETLADFGTVSFFGVPNF 201          
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Match: A0A3M0XTI3_9PROT (Iron ABC transporter permease (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0XTI3_9PROT)

HSP 1 Score: 270 bits (691), Expect = 8.710e-86
Identity = 141/223 (63.23%), Postives = 170/223 (76.23%), Query Frame = 0
Query:    7 RKAPIVYISIGIAALII-----VPIIGVIWNVFQPGQGNWPHLASTVLPDYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVPAFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTSVLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVTGIALSLMETLADFGTVAHFGIPTF 224
            R+ PI   ++G AALII     +P+I V+ NVF P QG W HLA TVLP Y+ N++ L VGVG GV  +G + AWLV M RFPGR  FEWALILPLAVPA+V+AY YTD LQ +GPVQ+LLR++TGW  ++Y+FP IRS+GGAI +   VL PYVYLL+R AFLEQS+CALEVSRTLG  P  SF  VALP+ARP+IV G AL+LMET+ADFGTVA F + TF
Sbjct:   28 RRRPIG--ALGWAALIIALLFSIPVISVLANVFVPSQGTWQHLAETVLPRYVANTVWLAVGVGAGVLTIGISTAWLVTMCRFPGRWIFEWALILPLAVPAYVMAYTYTDLLQFTGPVQSLLREITGWGPREYWFPPIRSLGGAIAMLAFVLYPYVYLLSRAAFLEQSVCALEVSRTLGCGPWASFFRVALPLARPSIVAGTALALMETIADFGTVAFFNVQTF 248          
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Match: A0A7V7KG44_9GAMM (Iron ABC transporter permease n=3 Tax=Halomonas TaxID=2745 RepID=A0A7V7KG44_9GAMM)

HSP 1 Score: 274 bits (701), Expect = 1.150e-85
Identity = 135/219 (61.64%), Postives = 166/219 (75.80%), Query Frame = 0
Query:    6 HRKAPIVYISIGIAALIIVPIIGVIWNVFQPGQGNWPHLASTVLPDYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVPAFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTSVLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVTGIALSLMETLADFGTVAHFGIPTF 224
            HR +P   + + IA  + +P+I ++ +VF P QG W HLASTVL  Y+ N+  L V VGLG  ++GT  AWLVVM RFPGRR FEWAL+LPLAVP +V+AYAYTDFLQ +GP+Q+ LR+L GWS  DYYFPNIRS+GGA  + T VL PYVYLLAR AFLEQS+C L+V RTLGR P R F+ VA+P+ARPAIV G++L LMETL +FG V  FG+ TF
Sbjct:   62 HRLSPWSLLVLAIALFVALPVIAILAHVFMPTQGIWQHLASTVLSRYLSNTFLLAVTVGLGTMVIGTGTAWLVVMCRFPGRRLFEWALLLPLAVPTYVIAYAYTDFLQFAGPLQSWLRELFGWSHGDYYFPNIRSLGGAATLMTLVLYPYVYLLARAAFLEQSVCVLDVGRTLGRGPWRLFVSVAVPLARPAIVGGVSLVLMETLNEFGAVQFFGVDTF 280          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98553.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00190358631.910e-10671.69iron ABC transporter permease n=1 Tax=Thiohalocaps... [more]
UPI000731F5C62.770e-10670.59iron ABC transporter permease n=1 Tax=Thiohalocaps... [more]
UPI000E5C728E1.010e-9266.67iron ABC transporter permease n=1 Tax=Algihabitans... [more]
UPI001F0E7BBD1.680e-9264.15iron ABC transporter permease n=1 Tax=Pelagibius l... [more]
UPI001D043CF11.930e-9163.43iron ABC transporter permease n=1 Tax=Pelagibius s... [more]
UPI001FB271124.900e-9163.47iron ABC transporter permease n=1 Tax=Orrella sp. ... [more]
UPI00037A8C557.540e-8761.82iron ABC transporter permease n=1 Tax=Amorphus cor... [more]
A0A843RKD3_9PROT7.990e-8664.68ABC transporter permease subunit n=1 Tax=Kiloniell... [more]
A0A3M0XTI3_9PROT8.710e-8663.23Iron ABC transporter permease (Fragment) n=1 Tax=A... [more]
A0A7V7KG44_9GAMM1.150e-8561.64Iron ABC transporter permease n=3 Tax=Halomonas Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000515ABC transporter type 1, transmembrane domain MetI-likePFAMPF00528BPD_transp_1coord: 70..217
e-value: 7.3E-10
score: 38.9
IPR000515ABC transporter type 1, transmembrane domain MetI-likePROSITEPS50928ABC_TM1coord: 53..224
score: 18.291225
IPR000515ABC transporter type 1, transmembrane domain MetI-likeCDDcd06261TM_PBP2coord: 53..217
e-value: 9.45343E-8
score: 48.4289
IPR035906MetI-like superfamilyGENE3D1.10.3720.10coord: 10..224
e-value: 1.2E-31
score: 112.0
IPR035906MetI-like superfamilySUPERFAMILY161098MetI-likecoord: 6..220
NoneNo IPR availablePANTHERPTHR30183:SF2IRON UTILIZATION PROTEINcoord: 13..224
NoneNo IPR availablePANTHERPTHR30183MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODBcoord: 13..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98553contigL-digitata_M_contig98553:297..968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98553.1.1mRNA_L-digitata_M_contig98553.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98553 294..968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98553.1.1 ID=prot_L-digitata_M_contig98553.1.1|Name=mRNA_L-digitata_M_contig98553.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=224bp
MTPRLHRKAPIVYISIGIAALIIVPIIGVIWNVFQPGQGNWPHLASTVLP
DYILNSLTLMVGVGLGVGLVGTALAWLVVMYRFPGRRFFEWALILPLAVP
AFVVAYAYTDFLQGSGPVQTLLRDLTGWSFQDYYFPNIRSMGGAIVIFTS
VLIPYVYLLARNAFLEQSICALEVSRTLGRTPLRSFLDVALPMARPAIVT
GIALSLMETLADFGTVAHFGIPTF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000515MetI-like
IPR035906MetI-like_sf