prot_L-digitata_M_contig98470.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98470.2.1
Unique Nameprot_L-digitata_M_contig98470.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length220
Homology
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Match: A0A2D7FLL1_9PROT (Lon protease n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FLL1_9PROT)

HSP 1 Score: 376 bits (965), Expect = 4.700e-123
Identity = 199/220 (90.45%), Postives = 212/220 (96.36%), Query Frame = 0
Query:    1 MSDTAKTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIMRYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPEVLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFMESEIGVLQVEKRIRNRVKRQM 220
            MS TAK+AIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVM+DDKQILLVAQ+NAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKI+RYTEND+FFQAEAELL+ VV++ KD+EALSRSVVTQFEQYIKLNKKIP EVLVSLNQIEDP KLSDTIASHLA+KI+EKQELLE V+A DRLERA SFMESEIGVLQVEK+IRNRVKRQM
Sbjct:    1 MSGTAKSAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMEDDKQILLVAQRNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKILRYTENDNFFQAEAELLESVVEEDKDVEALSRSVVTQFEQYIKLNKKIPAEVLVSLNQIEDPAKLSDTIASHLAVKIAEKQELLELVAAGDRLERAYSFMESEIGVLQVEKKIRNRVKRQM 220          
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Match: A0A2S6QCF5_9PROT (Lon protease n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6QCF5_9PROT)

HSP 1 Score: 352 bits (904), Expect = 5.740e-114
Identity = 186/220 (84.55%), Postives = 204/220 (92.73%), Query Frame = 0
Query:    1 MSDTAKTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIMRYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPEVLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFMESEIGVLQVEKRIRNRVKRQM 220
            MSDTAK  IFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQK+AGQDDPA+++IY++GTIGTVLQLLKLPDGTVKVLVEGSQRAK++RYT+  +FFQAEAEL+ +  D  KD+EAL RSV++QFEQYIKLNKKIPPEVLVSLNQ+ED  KLSDTIASHLALKISEKQELLE VS A+RLERA S MESEIGVLQVEKRIR+RVKRQM
Sbjct:    1 MSDTAKKTIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKDAGQDDPAIDEIYDVGTIGTVLQLLKLPDGTVKVLVEGSQRAKVVRYTDKAEFFQAEAELIVETADKDKDIEALCRSVISQFEQYIKLNKKIPPEVLVSLNQMEDESKLSDTIASHLALKISEKQELLELVSPAERLERAYSSMESEIGVLQVEKRIRSRVKRQM 220          
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Match: A0A2D8G4E6_9PROT (Lon protease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G4E6_9PROT)

HSP 1 Score: 347 bits (889), Expect = 9.790e-112
Identity = 184/220 (83.64%), Postives = 199/220 (90.45%), Query Frame = 0
Query:    1 MSDTAKTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIMRYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPEVLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFMESEIGVLQVEKRIRNRVKRQM 220
            MSDTAK + FPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPA EDIY +GTIGTVLQL KLPDGTVKVLVEGS+RAKI+RYT  +DFFQAEAE +++V   G D+EALSRSV++QFE YIKLNKKIPPEVLVSLNQIED  KLSDTIASHLA KI+EKQELLE  S A RLE+A +FMESEIGVLQVEKRIR+RVKRQM
Sbjct:    1 MSDTAKVSTFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAAEDIYXVGTIGTVLQLXKLPDGTVKVLVEGSKRAKILRYTSKEDFFQAEAEEVEEVXXXGTDIEALSRSVISQFENYIKLNKKIPPEVLVSLNQIEDVSKLSDTIASHLAXKIAEKQELLELTSPAQRLEKANTFMESEIGVLQVEKRIRSRVKRQM 220          
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Match: A0A6N7FF28_9PROT (Endopeptidase La (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FF28_9PROT)

HSP 1 Score: 323 bits (829), Expect = 5.030e-110
Identity = 167/220 (75.91%), Postives = 193/220 (87.73%), Query Frame = 0
Query:    1 MSDTAKTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIMRYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPEVLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFMESEIGVLQVEKRIRNRVKRQM 220
            MS+ ++  ++PVLPLRDIVVFPHMIVPLFVGR+KSV+ALEDVM+DDKQILLVAQKNA  D+P   DI+ +GT+GTVLQLLKLPDGTVKVLVEGS RA+I+ +TEND FF+A A  ++D  +D K+ EAL+RSV+ QFEQYIKLNKKIPPEVLVSLNQIEDP KL+DT+ASHLALKISEKQELLE  +  +RLERA  FMESEIGVLQVEKRIRNRVKRQM
Sbjct:    1 MSEQSQGVVYPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMKDDKQILLVAQKNASDDEPTAADIHSVGTVGTVLQLLKLPDGTVKVLVEGSHRARILDFTENDRFFEATARNMEDAGEDPKEFEALARSVIAQFEQYIKLNKKIPPEVLVSLNQIEDPSKLADTVASHLALKISEKQELLELPTVGERLERAYGFMESEIGVLQVEKRIRNRVKRQM 220          
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Match: A0A1N7IL06_9PROT (Lon protease n=2 Tax=Insolitispirillum peregrinum TaxID=80876 RepID=A0A1N7IL06_9PROT)

HSP 1 Score: 330 bits (846), Expect = 2.290e-105
Identity = 170/217 (78.34%), Postives = 194/217 (89.40%), Query Frame = 0
Query:    4 TAKTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIMRYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPEVLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFMESEIGVLQVEKRIRNRVKRQM 220
            T +T  FPVLPLRDIVVFPHMIVPLFVGRDKSV+ALEDVM DDKQILLVAQKNA QDDP  +DIY +GT+ TVLQLLKLPDGTVKVLVEG +RAKI RYT+ ++FF+AEAELLDD  DD ++LEAL+RSV++QFEQY+KLNKKIPPEVLVS+NQIEDP KL+DTIASHL+LKI+EKQELLE  + ++RLER    MESEIGVLQVEK+IRNRVKRQM
Sbjct:    2 TGRTQTFPVLPLRDIVVFPHMIVPLFVGRDKSVRALEDVMADDKQILLVAQKNAAQDDPGPDDIYAVGTVSTVLQLLKLPDGTVKVLVEGGERAKIARYTDREEFFEAEAELLDDQSDDSQELEALARSVISQFEQYLKLNKKIPPEVLVSINQIEDPAKLADTIASHLSLKIAEKQELLESATISERLERVYGHMESEIGVLQVEKKIRNRVKRQM 218          
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Match: A0A352GNQ5_9PROT (Endopeptidase La (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A352GNQ5_9PROT)

HSP 1 Score: 319 bits (817), Expect = 4.210e-105
Identity = 168/215 (78.14%), Postives = 187/215 (86.98%), Query Frame = 0
Query:    6 KTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIMRYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPEVLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFMESEIGVLQVEKRIRNRVKRQM 220
            K+  FPVLPLRDIVVFPHMIVPLFVGRDKSV+ALEDVMQDDKQILLVAQKNA QDDP  +DIY +GT+ TVLQLLKLPDGTVKVLVEG QRAK+  + +N  FF+ EAEL+ D   D  +LEALSRSV+ QFEQYIKLNKKIPPEVLVS+NQI++  KL+DT+ASHLALKISEKQELLE  SAA+RLER  S MESEIGVLQVEK+IRNRVKRQM
Sbjct:    2 KSQQFPVLPLRDIVVFPHMIVPLFVGRDKSVRALEDVMQDDKQILLVAQKNAAQDDPTADDIYTVGTVSTVLQLLKLPDGTVKVLVEGVQRAKVTEFVDNPSFFEVEAELIPDEEGDENELEALSRSVIGQFEQYIKLNKKIPPEVLVSINQIDEANKLADTVASHLALKISEKQELLEIESAAERLERVYSHMESEIGVLQVEKKIRNRVKRQM 216          
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Match: A4U0B9_9PROT (Lon protease n=4 Tax=Magnetospirillum TaxID=13134 RepID=A4U0B9_9PROT)

HSP 1 Score: 328 bits (841), Expect = 1.290e-104
Identity = 170/220 (77.27%), Postives = 197/220 (89.55%), Query Frame = 0
Query:    1 MSDTAKTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIMRYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPEVLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFMESEIGVLQVEKRIRNRVKRQM 220
            MS+ A+  +FPVLPLRDIVVFPHMIVPLFVGRDKSV+ALEDVM++DKQILLVAQKNA QDDP   DIY++GT+ TVLQLLKLPDGTVKVLVEG +RA+I  +T+N+ FFQA AE++DD V +G++LEALSRSVV QFEQYIKLNKKIPPEVLVS+NQIEDP KL+DT+ASHL+LKISEKQELLE  + A+RLER  S+ME EIGVLQVEK+IRNRVKRQM
Sbjct:    1 MSEIARGDVFPVLPLRDIVVFPHMIVPLFVGRDKSVRALEDVMREDKQILLVAQKNAAQDDPTTADIYDVGTVSTVLQLLKLPDGTVKVLVEGGRRARITGFTDNESFFQATAEMIDDGVLEGQELEALSRSVVGQFEQYIKLNKKIPPEVLVSVNQIEDPAKLADTVASHLSLKISEKQELLELGTTAERLERVYSYMEGEIGVLQVEKKIRNRVKRQM 220          
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Match: A0A522WCS4_9PROT (Endopeptidase La (Fragment) n=1 Tax=Magnetospirillum sp. TaxID=31872 RepID=A0A522WCS4_9PROT)

HSP 1 Score: 315 bits (806), Expect = 1.910e-104
Identity = 165/220 (75.00%), Postives = 192/220 (87.27%), Query Frame = 0
Query:    1 MSDTAKTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIMRYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPEVLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFMESEIGVLQVEKRIRNRVKRQM 220
            M +  +  IFPVLPLRDIVVFPHMIVPLFVGRDKSV+ALEDVM++DKQILLVAQKNA QDDP  +DIY +GT+ TVLQLLKLPDGTVKVLVEG +RA+I  +T+ND FFQA A+++D+   D ++LEALSRSVV+QFEQYIKLNKKIPPEVLVS+NQIED  KL+DT+ASHLALKI+EKQELLE    ++RLER  S+ME EIGVLQVEK+IRNRVKRQM
Sbjct:    1 MVENPRGDIFPVLPLRDIVVFPHMIVPLFVGRDKSVRALEDVMREDKQILLVAQKNAAQDDPTTDDIYTVGTVSTVLQLLKLPDGTVKVLVEGGKRARIRGFTDNDSFFQAYADVVDEREGDLQELEALSRSVVSQFEQYIKLNKKIPPEVLVSINQIEDAAKLADTVASHLALKIAEKQELLEVEVISERLERVYSYMEGEIGVLQVEKKIRNRVKRQM 220          
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Match: A0A2S6TLJ4_9PROT (Lon protease (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha3_Bin3 TaxID=2013069 RepID=A0A2S6TLJ4_9PROT)

HSP 1 Score: 319 bits (818), Expect = 4.470e-104
Identity = 168/217 (77.42%), Postives = 192/217 (88.48%), Query Frame = 0
Query:    4 TAKTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIMRYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPEVLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFMESEIGVLQVEKRIRNRVKRQM 220
            T +  ++PVLPLRDIVVFPHMIVPLFVGRDKSV+ALEDVM+DDK+ILLVAQKNA QDDP+  DIY++GT+ TVLQLLKLPDGTVKVLVEG QRAKI  Y +N+DFF AE EL+++     ++LEAL+RSVV+QFEQYIKLNKKIPPEVLVSLNQIEDPGKL+DT+ASHLALK+SEKQELLE    ADRLER  S ME+EIGVLQVEK+IRNRVKRQM
Sbjct:    2 TYQVDMYPVLPLRDIVVFPHMIVPLFVGRDKSVRALEDVMKDDKKILLVAQKNAAQDDPSANDIYKVGTVSTVLQLLKLPDGTVKVLVEGVQRAKITSYADNEDFFLAEGELINEDESLTEELEALNRSVVSQFEQYIKLNKKIPPEVLVSLNQIEDPGKLADTVASHLALKVSEKQELLETELVADRLERVYSHMEAEIGVLQVEKKIRNRVKRQM 218          
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Match: A0A7C7PHA7_9PROT (Endopeptidase La (Fragment) n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7PHA7_9PROT)

HSP 1 Score: 313 bits (803), Expect = 6.200e-104
Identity = 164/220 (74.55%), Postives = 190/220 (86.36%), Query Frame = 0
Query:    1 MSDTAKTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQILLVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIMRYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPEVLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFMESEIGVLQVEKRIRNRVKRQM 220
            M + A+  +FPVLPLRDIVVFPHMIVPLFVGRDKSV+ALEDVM+DDKQILLV QKNA QDDP   DIY +GTIGTVLQLLKLPDGTVKVLVEG QRA+I +Y + +DFFQA AE++ D   D ++L+AL+R+VV+QFEQYIKLNKKIPPEVLVS+NQI+D  KL+DT+ASHLALKI EKQELLE  + +DRLE+  +FME EIGVLQVEKRIRN VKRQM
Sbjct:    1 MLELARGNLFPVLPLRDIVVFPHMIVPLFVGRDKSVRALEDVMKDDKQILLVTQKNAAQDDPTPPDIYSVGTIGTVLQLLKLPDGTVKVLVEGGQRARITKYADTEDFFQAHAEIVQDDDGDDRELDALARTVVSQFEQYIKLNKKIPPEVLVSINQIDDFSKLADTVASHLALKIPEKQELLESETVSDRLEKVYAFMEGEIGVLQVEKRIRNCVKRQM 220          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98470.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7FLL1_9PROT4.700e-12390.45Lon protease n=1 Tax=Rhodospirillaceae bacterium T... [more]
A0A2S6QCF5_9PROT5.740e-11484.55Lon protease n=2 Tax=Alphaproteobacteria TaxID=282... [more]
A0A2D8G4E6_9PROT9.790e-11283.64Lon protease n=1 Tax=Alphaproteobacteria bacterium... [more]
A0A6N7FF28_9PROT5.030e-11075.91Endopeptidase La (Fragment) n=2 Tax=Alphaproteobac... [more]
A0A1N7IL06_9PROT2.290e-10578.34Lon protease n=2 Tax=Insolitispirillum peregrinum ... [more]
A0A352GNQ5_9PROT4.210e-10578.14Endopeptidase La (Fragment) n=1 Tax=Rhodospirillac... [more]
A4U0B9_9PROT1.290e-10477.27Lon protease n=4 Tax=Magnetospirillum TaxID=13134 ... [more]
A0A522WCS4_9PROT1.910e-10475.00Endopeptidase La (Fragment) n=1 Tax=Magnetospirill... [more]
A0A2S6TLJ4_9PROT4.470e-10477.42Lon protease (Fragment) n=1 Tax=Alphaproteobacteri... [more]
A0A7C7PHA7_9PROT6.200e-10474.55Endopeptidase La (Fragment) n=1 Tax=Kiloniellaceae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003111Lon protease, N-terminal domainSMARTSM00464lon_5coord: 9..201
e-value: 1.8E-83
score: 293.3
IPR003111Lon protease, N-terminal domainPFAMPF02190LON_substr_bdgcoord: 11..200
e-value: 7.1E-44
score: 150.1
IPR003111Lon protease, N-terminal domainPROSITEPS51787LON_Ncoord: 10..201
score: 55.175785
IPR046336Lon protease, N-terminal domain superfamilyGENE3D2.30.130.40coord: 1..117
e-value: 4.9E-41
score: 141.2
NoneNo IPR availableGENE3D1.20.58.1480coord: 123..209
e-value: 1.2E-31
score: 111.0
NoneNo IPR availablePANTHERPTHR10046:SF56LON PROTEASEcoord: 6..220
IPR027065Lon proteasePANTHERPTHR10046ATP DEPENDENT LON PROTEASE FAMILY MEMBERcoord: 6..220
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 10..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98470contigL-digitata_M_contig98470:309..968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98470.2.1mRNA_L-digitata_M_contig98470.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98470 309..968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98470.2.1 ID=prot_L-digitata_M_contig98470.2.1|Name=mRNA_L-digitata_M_contig98470.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=220bp
MSDTAKTAIFPVLPLRDIVVFPHMIVPLFVGRDKSVKALEDVMQDDKQIL
LVAQKNAGQDDPAVEDIYEMGTIGTVLQLLKLPDGTVKVLVEGSQRAKIM
RYTENDDFFQAEAELLDDVVDDGKDLEALSRSVVTQFEQYIKLNKKIPPE
VLVSLNQIEDPGKLSDTIASHLALKISEKQELLEFVSAADRLERACSFME
SEIGVLQVEKRIRNRVKRQM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003111Lon_prtase_N
IPR046336Lon_prtase_N_sf
IPR027065Lon_Prtase
IPR015947PUA-like_sf