prot_L-digitata_M_contig98463.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98463.2.1
Unique Nameprot_L-digitata_M_contig98463.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length56
Homology
[Close]
BLAST of mRNA_L-digitata_M_contig98463.2.1 vs. uniprot
Match: A0A059EEM9_9PROT (Uncharacterized protein n=4 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A059EEM9_9PROT)

HSP 1 Score: 111 bits (277), Expect = 1.030e-28
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 VQLSSTAFSKAKQTLADMFGGVSSAPRQGWNLAARDIRIEYVHTKMGLFWAFIEPL 56
            +QLSS AFSKAKQTLADMFGGVSSAPRQGWNLAARDIRIEYVHTKMGLFWAFIEPL
Sbjct:    1 MQLSSAAFSKAKQTLADMFGGVSSAPRQGWNLAARDIRIEYVHTKMGLFWAFIEPL 56
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98463.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A059EEM9_9PROT1.030e-2896.43Uncharacterized protein n=4 Tax=Hyphomonadaceae Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98463contigL-digitata_M_contig98463:801..968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98463.2.1mRNA_L-digitata_M_contig98463.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98463 801..968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98463.2.1 ID=prot_L-digitata_M_contig98463.2.1|Name=mRNA_L-digitata_M_contig98463.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=56bp
VQLSSTAFSKAKQTLADMFGGVSSAPRQGWNLAARDIRIEYVHTKMGLFW
AFIEPL
back to top