prot_L-digitata_M_contig98184.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig98184.1.1
Unique Nameprot_L-digitata_M_contig98184.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length57
Homology
[Close]
BLAST of mRNA_L-digitata_M_contig98184.1.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.300e-23
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0 
Query:    1 LAGLELARQAYLFQLFSDTLDSLVMKSRAEGAYDEGICEIKGRVLTFEGDPE 52
            L GL+LARQ YLFQLFSDTLDSLVMKSRAEGAYDEGICEIKGRVLTFEGDPE
Sbjct:  225 LLGLQLARQTYLFQLFSDTLDSLVMKSRAEGAYDEGICEIKGRVLTFEGDPE 276
[Close]
BLAST of mRNA_L-digitata_M_contig98184.1.1 vs. uniprot
Match: D8LL28_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL28_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 2.910e-6
Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0 
Query:    1 LAGLELARQAYLFQLFSDTLDSLVMKSRA 29
            L GLELARQ YLFQLFSDTLDSLVMKSR+
Sbjct:  832 LLGLELARQTYLFQLFSDTLDSLVMKSRS 860
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98184.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWU5_9PHAE1.300e-2394.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL28_ECTSI2.910e-689.66Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98184contigL-digitata_M_contig98184:752..922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98184.1.1mRNA_L-digitata_M_contig98184.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig98184 752..922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig98184.1.1 ID=prot_L-digitata_M_contig98184.1.1|Name=mRNA_L-digitata_M_contig98184.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=57bp
LAGLELARQAYLFQLFSDTLDSLVMKSRAEGAYDEGICEIKGRVLTFEGD
PEVGLL*
back to top