prot_L-digitata_M_contig9759.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9759.2.1
Unique Nameprot_L-digitata_M_contig9759.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length77
Homology
BLAST of mRNA_L-digitata_M_contig9759.2.1 vs. uniprot
Match: A0A6H5KW40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW40_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 6.270e-8
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    2 EKRNERPNVGGVSLRSWSGAPSRKGCVVNGQITKASNK 39
            +KR E PNVGGVS R  +GAPSRKG VVNGQ+T ASNK
Sbjct:  158 QKREELPNVGGVSSRGRNGAPSRKGRVVNGQMTTASNK 195          
BLAST of mRNA_L-digitata_M_contig9759.2.1 vs. uniprot
Match: A0A6H5K1U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1U0_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.510e-7
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    2 EKRNERPNVGGVSLRSWSGAPSRKGCVVNGQITKASNK 39
            +KR E PNVGGVS R  +GAPSRKG VVNGQ+T ASNK
Sbjct:  413 QKRTELPNVGGVSSRGRNGAPSRKGRVVNGQMTTASNK 450          
BLAST of mRNA_L-digitata_M_contig9759.2.1 vs. uniprot
Match: A0A6H5KW01_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW01_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.520e-7
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    2 EKRNERPNVGGVSLRSWSGAPSRKGCVVNGQITKASNK 39
            +KR E PNVGGVS R  +GAPSRKG VVNGQ+T ASNK
Sbjct:  497 QKRKELPNVGGVSSRGRNGAPSRKGRVVNGQMTTASNK 534          
BLAST of mRNA_L-digitata_M_contig9759.2.1 vs. uniprot
Match: A0A6H5KD64_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD64_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 3.960e-7
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    2 EKRNERPNVGGVSLRSWSGAPSRKGCVVNGQITKASNK 39
            +KR E PNVGGVS R  +G+PSRKG VVNGQ+T ASNK
Sbjct:  743 QKRKELPNVGGVSSRGRNGSPSRKGRVVNGQMTTASNK 780          
BLAST of mRNA_L-digitata_M_contig9759.2.1 vs. uniprot
Match: A0A6H5JJ48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ48_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 4.360e-7
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    2 EKRNERPNVGGVSLRSWSGAPSRKGCVVNGQITKASNK 39
            +KR E PNVGGVS R  +GAPSRKG VV+GQ+T ASNK
Sbjct:  185 QKRKELPNVGGVSSRGRNGAPSRKGRVVDGQMTTASNK 222          
BLAST of mRNA_L-digitata_M_contig9759.2.1 vs. uniprot
Match: A0A6H5KRD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD6_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.320e-6
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    2 EKRNERPNVGGVSLRSWSGAPSRKGCVVNGQITKASNK 39
            +KR E PNVGGVS    +GAPS KG VVNGQ+TKASNK
Sbjct:  334 QKRKELPNVGGVSSSGRNGAPSPKGRVVNGQMTKASNK 371          
BLAST of mRNA_L-digitata_M_contig9759.2.1 vs. uniprot
Match: A0A6H5KH74_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH74_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.820e-6
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    2 EKRNERPNVGGVSLRSWSGAPSRKGCVVNGQITKASNK 39
            +KR E PNVGGVS R  +GA SRKG VVNGQ+T ASNK
Sbjct:  355 QKRKELPNVGGVSSRGRNGASSRKGRVVNGQMTTASNK 392          
BLAST of mRNA_L-digitata_M_contig9759.2.1 vs. uniprot
Match: A0A6H5KVQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVQ8_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.610e-6
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    2 EKRNERPNVGGVSLRSWSGAPSRKGCVVNGQITKASNK 39
            +KR E PNVGGVS R  +GAPSRKG VVN Q+T ASNK
Sbjct:  991 QKRKELPNVGGVSSRGRNGAPSRKGRVVNVQMTTASNK 1028          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9759.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KW40_9PHAE6.270e-873.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1U0_9PHAE1.510e-773.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW01_9PHAE1.520e-773.68Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KD64_9PHAE3.960e-771.05Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JJ48_9PHAE4.360e-771.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRD6_9PHAE1.320e-671.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH74_9PHAE1.820e-671.05Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KVQ8_9PHAE2.610e-671.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9759contigL-digitata_M_contig9759:5591..5821 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9759.2.1mRNA_L-digitata_M_contig9759.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9759 5442..5973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9759.2.1 ID=prot_L-digitata_M_contig9759.2.1|Name=mRNA_L-digitata_M_contig9759.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=77bp
MEKRNERPNVGGVSLRSWSGAPSRKGCVVNGQITKASNKRVRPTLLPCHT
PGGGRGRIRSMDLILLGHITSDLVFH*
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