prot_L-digitata_M_contig102555.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig102555.2.1
Unique Nameprot_L-digitata_M_contig102555.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length212
Homology
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A2E7PMH8_9PROT (Precorrin-4 C(11)-methyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PMH8_9PROT)

HSP 1 Score: 318 bits (814), Expect = 2.430e-107
Identity = 164/207 (79.23%), Postives = 177/207 (85.51%), Query Frame = 0
Query:    2 DTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPRADT 208
            DTAPL LD+ IAR+ AAHA   D+ARVHSGDPSLYGAIGEQMRRLD L+IPYEVVPGVPAFAA SAAL RE TLP VSQTVILTRTSVRASDMPAGEEL+ LA + ATLAVHLSINNLA VVRDL PHYG DCPVV+ YRV+WPDE+FIRGTL TIR+ VKG+GITRTALILVG VLAEDL +   F DS+LY ASHHHVLRP   T
Sbjct:   53 DTAPLHLDEIIARIKAAHANSHDIARVHSGDPSLYGAIGEQMRRLDALDIPYEVVPGVPAFAAESAALDRELTLPGVSQTVILTRTSVRASDMPAGEELARLAEARATLAVHLSINNLANVVRDLTPHYGTDCPVVIGYRVSWPDERFIRGTLATIRDLVKGTGITRTALILVGQVLAEDLGNR--FDDSQLYAASHHHVLRPARKT 257          
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A848W597_9PROT (Precorrin-4 C(11)-methyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W597_9PROT)

HSP 1 Score: 305 bits (781), Expect = 2.300e-102
Identity = 151/205 (73.66%), Postives = 177/205 (86.34%), Query Frame = 0
Query:    1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 205
            +DTAP+ LD+ IA MVAA A G DVARVHSGDPS+YGAIGEQMR+L   +I YE+VPGVPAFAAA+AAL RE TLP+++QTVILTRTSVRASDMP GEEL+ LA+SHATLA+HLSINNL  VVR+L P+YG DCPVV+AYRV+WPD+Q ++GTL  IR+KVK  GITRTALILVGP LA DL +AEAFA+S+LY+  HHHVLRPR
Sbjct:   52 LDTAPVTLDEIIAHMVAAEAKGDDVARVHSGDPSIYGAIGEQMRQLVAHDIAYEIVPGVPAFAAAAAALGRELTLPDIAQTVILTRTSVRASDMPPGEELATLAQSHATLAIHLSINNLVPVVRELTPYYGADCPVVIAYRVSWPDQQIVQGTLADIRDKVKPLGITRTALILVGPALATDLDTAEAFANSQLYDPGHHHVLRPR 256          
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: UPI001A01D5DB (Precorrin-4 C(11)-methyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A01D5DB)

HSP 1 Score: 298 bits (764), Expect = 7.200e-100
Identity = 152/205 (74.15%), Postives = 167/205 (81.46%), Query Frame = 0
Query:    1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 205
            VDTAP+ LD+ IA M AAH  G D+ARVHSGDPSLYGAI EQMRRLD LEIPY+V PGVPAFAAA+AAL  E TLP +SQTVILTRT+VR+S MP GE+L  L RS ATLAVHLS+NNLA+VVR+LIPHYG DCPVVVAYRVTWPD+QFI GTL  IREKVK SGITRTALI+VG VLA     A  F +S LY   HHHVLRPR
Sbjct:   52 VDTAPMHLDEIIAEMQAAHEAGNDIARVHSGDPSLYGAIAEQMRRLDALEIPYDVTPGVPAFAAAAAALATELTLPEISQTVILTRTAVRSSSMPEGEDLETLGRSGATLAVHLSVNNLARVVRELIPHYGADCPVVVAYRVTWPDQQFIHGTLSDIREKVKASGITRTALIMVGRVLA-----ASDFDESRLYAPDHHHVLRPR 251          
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A2M7GGU9_9PROT (Precorrin-4 C(11)-methyltransferase n=6 Tax=Rhodospirillales TaxID=204441 RepID=A0A2M7GGU9_9PROT)

HSP 1 Score: 293 bits (749), Expect = 1.370e-97
Identity = 151/205 (73.66%), Postives = 165/205 (80.49%), Query Frame = 0
Query:    1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 205
            +DTAPL LD+ +A M AAHA GQDVARVHSGDPSLYGAI EQMRRLD L I Y+V PGVPAFAAA+AAL RE TLP VSQTVILTRT+VRAS+MP GE+L  L RS ATLAVHLS+NNLAKVVR+L PHYG DCPVVVAYRV+WPD+Q + GTL  IR KVK +G TRTALILVG  L E      AF DS LY A HHHVLRPR
Sbjct:   52 IDTAPLTLDEIVAEMAAAHAAGQDVARVHSGDPSLYGAIAEQMRRLDALGIAYDVTPGVPAFAAAAAALKRELTLPQVSQTVILTRTAVRASEMPEGEDLETLGRSGATLAVHLSVNNLAKVVRELTPHYGADCPVVVAYRVSWPDQQVVEGTLADIRGKVKAAGFTRTALILVGRALGE-----AAFDDSALYAAGHHHVLRPR 251          
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A2D9F6Y6_9PROT (Precorrin-4 C(11)-methyltransferase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F6Y6_9PROT)

HSP 1 Score: 292 bits (747), Expect = 2.960e-97
Identity = 147/205 (71.71%), Postives = 167/205 (81.46%), Query Frame = 0
Query:    1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 205
            +DTAP+ LD+ IA +  AHA G DVARVHSGDPS+YGAI EQMRRLD L IPY++ PGVPAFAAA+AAL +E TLPNVSQTV+LTRTSVRASDMP GE+L  L +S ATLAVHLS+NNLAKVVR+L PHYG+DCPVVVAYR TWPDEQF+ GTL  IR KVK +G TRTALILVG VL +       F DS LY A+HHHVLRP+
Sbjct:   52 LDTAPMNLDEIIAEIETAHAAGHDVARVHSGDPSIYGAIAEQMRRLDTLGIPYDITPGVPAFAAAAAALGKELTLPNVSQTVVLTRTSVRASDMPEGEDLETLGKSGATLAVHLSVNNLAKVVRELTPHYGEDCPVVVAYRATWPDEQFVHGTLADIRAKVKEAGFTRTALILVGRVLGDT-----HFNDSALYAAAHHHVLRPK 251          
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A2E8XQR9_9PROT (Precorrin-4 C(11)-methyltransferase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XQR9_9PROT)

HSP 1 Score: 287 bits (735), Expect = 1.480e-96
Identity = 147/172 (85.47%), Postives = 154/172 (89.53%), Query Frame = 0
Query:   34 SLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 205
            SLYGAIGEQMRRLD L IPYEV+PGVPAFAAASAAL RE TLP VSQTVILTRTSVRASDMPAGEEL ELAR+ ATLA+HLSINNLA V R L PHYG DCPVVVAYRV+WPDEQFIRGT+ TIRE VKGSGITRTALILVGPVLAEDLS AE+F DS+LY  SHHHVLRPR
Sbjct:    1 SLYGAIGEQMRRLDGLGIPYEVIPGVPAFAAASAALARELTLPAVSQTVILTRTSVRASDMPAGEELDELARAGATLAIHLSINNLANVARALTPHYGADCPVVVAYRVSWPDEQFIRGTIGTIRELVKGSGITRTALILVGPVLAEDLSGAESFEDSQLYAPSHHHVLRPR 172          
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A5M6I7D9_9PROT (Precorrin-4 C(11)-methyltransferase n=2 Tax=Roseospira TaxID=86671 RepID=A0A5M6I7D9_9PROT)

HSP 1 Score: 282 bits (722), Expect = 1.810e-93
Identity = 143/206 (69.42%), Postives = 166/206 (80.58%), Query Frame = 0
Query:    1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPRA 206
            +DTAPL LD+ +A + AAHA G DVARVHSGDPSLYGAIGEQ+RRLD L IP+E+VPGVPAFAAA+A L RE TLP+V+QTVILTRTS R+S MP GE+L  L RS ATLA+HLSI+NLA VVRDL PHYG DCPV V YR +WPDE+ + GTL+TIR+ VK +G+TRTALILVG VL        AF+DS LY A HHHVLRPR+
Sbjct:   52 IDTAPLHLDEILADIKAAHAAGHDVARVHSGDPSLYGAIGEQIRRLDPLGIPWEIVPGVPAFAAAAATLGRELTLPDVAQTVILTRTSTRSSAMPPGEDLDTLGRSGATLAIHLSISNLANVVRDLTPHYGADCPVAVIYRASWPDERVLTGTLDTIRDTVKAAGLTRTALILVGRVL----DPTAAFSDSHLYAAGHHHVLRPRS 253          
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A2S6U0N0_9PROT (Precorrin-4 C(11)-methyltransferase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin1 TaxID=2013074 RepID=A0A2S6U0N0_9PROT)

HSP 1 Score: 281 bits (720), Expect = 3.890e-93
Identity = 139/205 (67.80%), Postives = 167/205 (81.46%), Query Frame = 0
Query:    1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 205
            VDTAPL LD+ I  +V AH  G DVARVHSGDP+LYGAIGEQMRRLD L+IPY+V PGVP++AAA+AA+  E TLP ++QTVILTRT+ RAS MP GEEL+ LA+S ATLA+HLSINNLA+V+RDL PHYG  CPVV+AYRV+WPDE+ +RGTL  IR++VK + ITRTAL+LVGPVL      A+ +ADS LY   HHHVLRP+
Sbjct:   52 VDTAPLTLDEIIDEIVHAHGAGLDVARVHSGDPALYGAIGEQMRRLDALDIPYDVTPGVPSYAAAAAAIKSELTLPGIAQTVILTRTATRASAMPPGEELATLAQSGATLAIHLSINNLARVIRDLTPHYGAQCPVVIAYRVSWPDERILRGTLADIRDQVKAAKITRTALVLVGPVL-----DAQTYADSRLYAEDHHHVLRPK 251          
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A7X2FUE3_9PROT (Precorrin-4 C(11)-methyltransferase n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FUE3_9PROT)

HSP 1 Score: 280 bits (716), Expect = 1.630e-92
Identity = 138/208 (66.35%), Postives = 168/208 (80.77%), Query Frame = 0
Query:    1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPRADT 208
            +DTAPL LD+ I+ + AAH  GQDVARVHSGDPS+YGAI EQMRRLD L+IPY++ PGVPAFAAA+A L  E TLP+VSQ V++TRT+VR+S MP G+EL+ LA    TLA+HLSINN+AKVVRDL P YG DCPVV+AYRV WPD+ F++GTL  IR+KVK SG+TRTALI+VG V  +      AF DS+LY+A+HHHVLRP+A T
Sbjct:   52 IDTAPLHLDEIISEIQAAHDRGQDVARVHSGDPSIYGAIAEQMRRLDALDIPYDITPGVPAFAAAAAELKTELTLPDVSQAVLVTRTAVRSSSMPEGQELANLAAGRPTLALHLSINNIAKVVRDLSPIYGADCPVVIAYRVGWPDQLFLKGTLSDIRDKVKESGVTRTALIMVGAVFGD-----AAFTDSKLYDAAHHHVLRPKAQT 254          
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A7Y0E120_9PROT (Precorrin-4 C(11)-methyltransferase n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0E120_9PROT)

HSP 1 Score: 278 bits (712), Expect = 5.590e-92
Identity = 142/206 (68.93%), Postives = 163/206 (79.13%), Query Frame = 0
Query:    1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPRA 206
            +DTAP+ L++ I  +VAAH  GQDVARVHSGDPS+YGA  EQMRRLD L IPY+V PGV A+AAA+A+L +E TL  V QTVILTRT+VRAS MP GE+L  L RS ATLA+HLS+NNLAKVVR+L+PHYG+DCPVVVAYRV WPDE FI GTL  IR KVK SG TRTALILVG VL         F DS+LY+A HHHVLRP+A
Sbjct:   52 LDTAPMNLEEIIDEIVAAHEKGQDVARVHSGDPSIYGATAEQMRRLDALGIPYDVTPGVSAYAAAAASLKKELTLAGVGQTVILTRTAVRASGMPEGEDLETLGRSKATLAIHLSVNNLAKVVRELVPHYGEDCPVVVAYRVGWPDEDFIHGTLGDIRPKVKASGYTRTALILVGRVL-----DPHGFDDSKLYDAGHHHVLRPKA 252          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7PMH8_9PROT2.430e-10779.23Precorrin-4 C(11)-methyltransferase n=1 Tax=Rhodos... [more]
A0A848W597_9PROT2.300e-10273.66Precorrin-4 C(11)-methyltransferase n=1 Tax=Alphap... [more]
UPI001A01D5DB7.200e-10074.15Precorrin-4 C(11)-methyltransferase n=1 Tax=Proteo... [more]
A0A2M7GGU9_9PROT1.370e-9773.66Precorrin-4 C(11)-methyltransferase n=6 Tax=Rhodos... [more]
A0A2D9F6Y6_9PROT2.960e-9771.71Precorrin-4 C(11)-methyltransferase n=2 Tax=Rhodos... [more]
A0A2E8XQR9_9PROT1.480e-9685.47Precorrin-4 C(11)-methyltransferase (Fragment) n=1... [more]
A0A5M6I7D9_9PROT1.810e-9369.42Precorrin-4 C(11)-methyltransferase n=2 Tax=Roseos... [more]
A0A2S6U0N0_9PROT3.890e-9367.80Precorrin-4 C(11)-methyltransferase n=1 Tax=Alphap... [more]
A0A7X2FUE3_9PROT1.630e-9266.35Precorrin-4 C(11)-methyltransferase n=1 Tax=Alphap... [more]
A0A7Y0E120_9PROT5.590e-9268.93Precorrin-4 C(11)-methyltransferase n=1 Tax=Pacifi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000878Tetrapyrrole methylasePFAMPF00590TP_methylasecoord: 12..157
e-value: 1.4E-27
score: 97.0
IPR014776Tetrapyrrole methylase, subdomain 2GENE3D3.30.950.10coord: 60..182
e-value: 8.1E-31
score: 108.6
IPR014777Tetrapyrrole methylase, subdomain 1GENE3D3.40.1010.10coord: 2..59
e-value: 9.5E-11
score: 44.5
NoneNo IPR availablePANTHERPTHR45790:SF4COBALT-PRECORRIN-4 C(11)-METHYLTRANSFERASEcoord: 1..205
NoneNo IPR availablePANTHERPTHR45790SIROHEME SYNTHASE-RELATEDcoord: 1..205
IPR006362Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferaseCDDcd11641Precorrin-4_C11-MTcoord: 1..179
e-value: 1.86844E-88
score: 258.093
IPR035996Tetrapyrrole methylase superfamilySUPERFAMILY53790Tetrapyrrole methylasecoord: 3..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig102555contigL-digitata_M_contig102555:276..911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig102555.2.1mRNA_L-digitata_M_contig102555.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig102555 276..911 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig102555.2.1 ID=prot_L-digitata_M_contig102555.2.1|Name=mRNA_L-digitata_M_contig102555.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=212bp
VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLE
IPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEEL
SELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFI
RGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHH
VLRPRADTEGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0008784pyrrol_Mease
IPR0147764pyrrole_Mease_sub2
IPR0147774pyrrole_Mease_sub1
IPR006362Cbl_synth_CobM/CibF
IPR0359964pyrrol_Methylase_sf