mRNA_L-digitata_M_contig102555.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A2E7PMH8_9PROT (Precorrin-4 C(11)-methyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PMH8_9PROT) HSP 1 Score: 318 bits (814), Expect = 2.430e-107 Identity = 164/207 (79.23%), Postives = 177/207 (85.51%), Query Frame = 1
Query: 4 DTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPRADT 624
DTAPL LD+ IAR+ AAHA D+ARVHSGDPSLYGAIGEQMRRLD L+IPYEVVPGVPAFAA SAAL RE TLP VSQTVILTRTSVRASDMPAGEEL+ LA + ATLAVHLSINNLA VVRDL PHYG DCPVV+ YRV+WPDE+FIRGTL TIR+ VKG+GITRTALILVG VLAEDL + F DS+LY ASHHHVLRP T
Sbjct: 53 DTAPLHLDEIIARIKAAHANSHDIARVHSGDPSLYGAIGEQMRRLDALDIPYEVVPGVPAFAAESAALDRELTLPGVSQTVILTRTSVRASDMPAGEELARLAEARATLAVHLSINNLANVVRDLTPHYGTDCPVVIGYRVSWPDERFIRGTLATIRDLVKGTGITRTALILVGQVLAEDLGNR--FDDSQLYAASHHHVLRPARKT 257
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A848W597_9PROT (Precorrin-4 C(11)-methyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W597_9PROT) HSP 1 Score: 305 bits (781), Expect = 2.300e-102 Identity = 151/205 (73.66%), Postives = 177/205 (86.34%), Query Frame = 1
Query: 1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 615
+DTAP+ LD+ IA MVAA A G DVARVHSGDPS+YGAIGEQMR+L +I YE+VPGVPAFAAA+AAL RE TLP+++QTVILTRTSVRASDMP GEEL+ LA+SHATLA+HLSINNL VVR+L P+YG DCPVV+AYRV+WPD+Q ++GTL IR+KVK GITRTALILVGP LA DL +AEAFA+S+LY+ HHHVLRPR
Sbjct: 52 LDTAPVTLDEIIAHMVAAEAKGDDVARVHSGDPSIYGAIGEQMRQLVAHDIAYEIVPGVPAFAAAAAALGRELTLPDIAQTVILTRTSVRASDMPPGEELATLAQSHATLAIHLSINNLVPVVRELTPYYGADCPVVIAYRVSWPDQQIVQGTLADIRDKVKPLGITRTALILVGPALATDLDTAEAFANSQLYDPGHHHVLRPR 256
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: UPI001A01D5DB (Precorrin-4 C(11)-methyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A01D5DB) HSP 1 Score: 298 bits (764), Expect = 7.200e-100 Identity = 152/205 (74.15%), Postives = 167/205 (81.46%), Query Frame = 1
Query: 1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 615
VDTAP+ LD+ IA M AAH G D+ARVHSGDPSLYGAI EQMRRLD LEIPY+V PGVPAFAAA+AAL E TLP +SQTVILTRT+VR+S MP GE+L L RS ATLAVHLS+NNLA+VVR+LIPHYG DCPVVVAYRVTWPD+QFI GTL IREKVK SGITRTALI+VG VLA A F +S LY HHHVLRPR
Sbjct: 52 VDTAPMHLDEIIAEMQAAHEAGNDIARVHSGDPSLYGAIAEQMRRLDALEIPYDVTPGVPAFAAAAAALATELTLPEISQTVILTRTAVRSSSMPEGEDLETLGRSGATLAVHLSVNNLARVVRELIPHYGADCPVVVAYRVTWPDQQFIHGTLSDIREKVKASGITRTALIMVGRVLA-----ASDFDESRLYAPDHHHVLRPR 251
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A2M7GGU9_9PROT (Precorrin-4 C(11)-methyltransferase n=6 Tax=Rhodospirillales TaxID=204441 RepID=A0A2M7GGU9_9PROT) HSP 1 Score: 293 bits (749), Expect = 1.370e-97 Identity = 151/205 (73.66%), Postives = 165/205 (80.49%), Query Frame = 1
Query: 1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 615
+DTAPL LD+ +A M AAHA GQDVARVHSGDPSLYGAI EQMRRLD L I Y+V PGVPAFAAA+AAL RE TLP VSQTVILTRT+VRAS+MP GE+L L RS ATLAVHLS+NNLAKVVR+L PHYG DCPVVVAYRV+WPD+Q + GTL IR KVK +G TRTALILVG L E AF DS LY A HHHVLRPR
Sbjct: 52 IDTAPLTLDEIVAEMAAAHAAGQDVARVHSGDPSLYGAIAEQMRRLDALGIAYDVTPGVPAFAAAAAALKRELTLPQVSQTVILTRTAVRASEMPEGEDLETLGRSGATLAVHLSVNNLAKVVRELTPHYGADCPVVVAYRVSWPDQQVVEGTLADIRGKVKAAGFTRTALILVGRALGE-----AAFDDSALYAAGHHHVLRPR 251
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A2D9F6Y6_9PROT (Precorrin-4 C(11)-methyltransferase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F6Y6_9PROT) HSP 1 Score: 292 bits (747), Expect = 2.960e-97 Identity = 147/205 (71.71%), Postives = 167/205 (81.46%), Query Frame = 1
Query: 1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 615
+DTAP+ LD+ IA + AHA G DVARVHSGDPS+YGAI EQMRRLD L IPY++ PGVPAFAAA+AAL +E TLPNVSQTV+LTRTSVRASDMP GE+L L +S ATLAVHLS+NNLAKVVR+L PHYG+DCPVVVAYR TWPDEQF+ GTL IR KVK +G TRTALILVG VL + F DS LY A+HHHVLRP+
Sbjct: 52 LDTAPMNLDEIIAEIETAHAAGHDVARVHSGDPSIYGAIAEQMRRLDTLGIPYDITPGVPAFAAAAAALGKELTLPNVSQTVVLTRTSVRASDMPEGEDLETLGKSGATLAVHLSVNNLAKVVRELTPHYGEDCPVVVAYRATWPDEQFVHGTLADIRAKVKEAGFTRTALILVGRVLGDT-----HFNDSALYAAAHHHVLRPK 251
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A2E8XQR9_9PROT (Precorrin-4 C(11)-methyltransferase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XQR9_9PROT) HSP 1 Score: 287 bits (735), Expect = 1.480e-96 Identity = 147/172 (85.47%), Postives = 154/172 (89.53%), Query Frame = 1
Query: 100 SLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 615
SLYGAIGEQMRRLD L IPYEV+PGVPAFAAASAAL RE TLP VSQTVILTRTSVRASDMPAGEEL ELAR+ ATLA+HLSINNLA V R L PHYG DCPVVVAYRV+WPDEQFIRGT+ TIRE VKGSGITRTALILVGPVLAEDLS AE+F DS+LY SHHHVLRPR
Sbjct: 1 SLYGAIGEQMRRLDGLGIPYEVIPGVPAFAAASAALARELTLPAVSQTVILTRTSVRASDMPAGEELDELARAGATLAIHLSINNLANVARALTPHYGADCPVVVAYRVSWPDEQFIRGTIGTIRELVKGSGITRTALILVGPVLAEDLSGAESFEDSQLYAPSHHHVLRPR 172
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A5M6I7D9_9PROT (Precorrin-4 C(11)-methyltransferase n=2 Tax=Roseospira TaxID=86671 RepID=A0A5M6I7D9_9PROT) HSP 1 Score: 282 bits (722), Expect = 1.810e-93 Identity = 143/206 (69.42%), Postives = 166/206 (80.58%), Query Frame = 1
Query: 1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPRA 618
+DTAPL LD+ +A + AAHA G DVARVHSGDPSLYGAIGEQ+RRLD L IP+E+VPGVPAFAAA+A L RE TLP+V+QTVILTRTS R+S MP GE+L L RS ATLA+HLSI+NLA VVRDL PHYG DCPV V YR +WPDE+ + GTL+TIR+ VK +G+TRTALILVG VL AF+DS LY A HHHVLRPR+
Sbjct: 52 IDTAPLHLDEILADIKAAHAAGHDVARVHSGDPSLYGAIGEQIRRLDPLGIPWEIVPGVPAFAAAAATLGRELTLPDVAQTVILTRTSTRSSAMPPGEDLDTLGRSGATLAIHLSISNLANVVRDLTPHYGADCPVAVIYRASWPDERVLTGTLDTIRDTVKAAGLTRTALILVGRVL----DPTAAFSDSHLYAAGHHHVLRPRS 253
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A2S6U0N0_9PROT (Precorrin-4 C(11)-methyltransferase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin1 TaxID=2013074 RepID=A0A2S6U0N0_9PROT) HSP 1 Score: 281 bits (720), Expect = 3.890e-93 Identity = 139/205 (67.80%), Postives = 167/205 (81.46%), Query Frame = 1
Query: 1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPR 615
VDTAPL LD+ I +V AH G DVARVHSGDP+LYGAIGEQMRRLD L+IPY+V PGVP++AAA+AA+ E TLP ++QTVILTRT+ RAS MP GEEL+ LA+S ATLA+HLSINNLA+V+RDL PHYG CPVV+AYRV+WPDE+ +RGTL IR++VK + ITRTAL+LVGPVL A+ +ADS LY HHHVLRP+
Sbjct: 52 VDTAPLTLDEIIDEIVHAHGAGLDVARVHSGDPALYGAIGEQMRRLDALDIPYDVTPGVPSYAAAAAAIKSELTLPGIAQTVILTRTATRASAMPPGEELATLAQSGATLAIHLSINNLARVIRDLTPHYGAQCPVVIAYRVSWPDERILRGTLADIRDQVKAAKITRTALVLVGPVL-----DAQTYADSRLYAEDHHHVLRPK 251
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A7X2FUE3_9PROT (Precorrin-4 C(11)-methyltransferase n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FUE3_9PROT) HSP 1 Score: 280 bits (716), Expect = 1.630e-92 Identity = 138/208 (66.35%), Postives = 168/208 (80.77%), Query Frame = 1
Query: 1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPRADT 624
+DTAPL LD+ I+ + AAH GQDVARVHSGDPS+YGAI EQMRRLD L+IPY++ PGVPAFAAA+A L E TLP+VSQ V++TRT+VR+S MP G+EL+ LA TLA+HLSINN+AKVVRDL P YG DCPVV+AYRV WPD+ F++GTL IR+KVK SG+TRTALI+VG V + AF DS+LY+A+HHHVLRP+A T
Sbjct: 52 IDTAPLHLDEIISEIQAAHDRGQDVARVHSGDPSIYGAIAEQMRRLDALDIPYDITPGVPAFAAAAAELKTELTLPDVSQAVLVTRTAVRSSSMPEGQELANLAAGRPTLALHLSINNIAKVVRDLSPIYGADCPVVIAYRVGWPDQLFLKGTLSDIRDKVKESGVTRTALIMVGAVFGD-----AAFTDSKLYDAAHHHVLRPKAQT 254
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Match: A0A7Y0E120_9PROT (Precorrin-4 C(11)-methyltransferase n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0E120_9PROT) HSP 1 Score: 278 bits (712), Expect = 5.590e-92 Identity = 142/206 (68.93%), Postives = 163/206 (79.13%), Query Frame = 1
Query: 1 VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEIPYEVVPGVPAFAAASAALCREFTLPNVSQTVILTRTSVRASDMPAGEELSELARSHATLAVHLSINNLAKVVRDLIPHYGKDCPVVVAYRVTWPDEQFIRGTLETIREKVKGSGITRTALILVGPVLAEDLSSAEAFADSELYNASHHHVLRPRA 618
+DTAP+ L++ I +VAAH GQDVARVHSGDPS+YGA EQMRRLD L IPY+V PGV A+AAA+A+L +E TL V QTVILTRT+VRAS MP GE+L L RS ATLA+HLS+NNLAKVVR+L+PHYG+DCPVVVAYRV WPDE FI GTL IR KVK SG TRTALILVG VL F DS+LY+A HHHVLRP+A
Sbjct: 52 LDTAPMNLEEIIDEIVAAHEKGQDVARVHSGDPSIYGATAEQMRRLDALGIPYDVTPGVSAYAAAAASLKKELTLAGVGQTVILTRTAVRASGMPEGEDLETLGRSKATLAIHLSVNNLAKVVRELVPHYGEDCPVVVAYRVGWPDEDFIHGTLGDIRPKVKASGYTRTALILVGRVL-----DPHGFDDSKLYDAGHHHVLRPKA 252 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102555.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102555.2.1 >prot_L-digitata_M_contig102555.2.1 ID=prot_L-digitata_M_contig102555.2.1|Name=mRNA_L-digitata_M_contig102555.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=212bp VDTAPLQLDQSIARMVAAHALGQDVARVHSGDPSLYGAIGEQMRRLDVLEback to top mRNA from alignment at L-digitata_M_contig102555:276..911- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102555.2.1 ID=mRNA_L-digitata_M_contig102555.2.1|Name=mRNA_L-digitata_M_contig102555.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=636bp|location=Sequence derived from alignment at L-digitata_M_contig102555:276..911- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102555:276..911- >mRNA_L-digitata_M_contig102555.2.1 ID=mRNA_L-digitata_M_contig102555.2.1|Name=mRNA_L-digitata_M_contig102555.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=636bp|location=Sequence derived from alignment at L-digitata_M_contig102555:276..911- (Laminaria digitata LdigPH10_18mv male)back to top |