prot_L-digitata_M_contig10250.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10250.2.1
Unique Nameprot_L-digitata_M_contig10250.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length91
Homology
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BLAST of mRNA_L-digitata_M_contig10250.2.1 vs. uniprot
Match: A0A6H5KUE2_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.030e-12
Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 0 
Query:   16 GVSYVKLTAPVSIPLSLDLSRFCTRYTGNPPVDELGQAVESLKALGLPPTP 66
            GVSYVKL +PVS+PL LDL RFC+ YTGN P ++LG+ V+SL  LG+P  P
Sbjct:  985 GVSYVKLASPVSVPLELDLERFCSGYTGNAPAEDLGKQVDSLDGLGIPRVP 1035
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BLAST of mRNA_L-digitata_M_contig10250.2.1 vs. uniprot
Match: D7G2P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P5_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 6.750e-12
Identity = 31/49 (63.27%), Postives = 40/49 (81.63%), Query Frame = 0 
Query:   16 GVSYVKLTAPVSIPLSLDLSRFCTRYTGNPPVDELGQAVESLKALGLPP 64
            GVSYVKL++PVS+PL LDL RFC+ YTGN P ++LG+ V+SL  LG+ P
Sbjct:  886 GVSYVKLSSPVSVPLELDLERFCSGYTGNAPAEDLGKQVDSLDGLGILP 934
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10250.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUE2_9PHAE1.030e-1262.75USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2P5_ECTSI6.750e-1263.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10250contigL-digitata_M_contig10250:1644..2224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10250.2.1mRNA_L-digitata_M_contig10250.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10250 1644..2226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10250.2.1 ID=prot_L-digitata_M_contig10250.2.1|Name=mRNA_L-digitata_M_contig10250.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=91bp
SGGGGTGSGSGSGSSGVSYVKLTAPVSIPLSLDLSRFCTRYTGNPPVDEL
GQAVESLKALGLPPTPAETAPAPGSNSSALAAAVTTARAAA
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