prot_L-digitata_M_contig102258.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig102258.1.1
Unique Nameprot_L-digitata_M_contig102258.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length109
Homology
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Match: A0A6H5KCG4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG4_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 4.840e-21
Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    1 MSRFSMADMGDVSLVLGTSATRDRGKETVTITQGRYTKSLLERYCVASCNSTYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRYDI 97
            M  F M DMG+V  V+G    RD    T+ I+QG Y + +L+RY +   N   TP  G ELS  QP++ LL  E+KQRFQAI GS +YL   TRYD+
Sbjct:  127 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDL 223          
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.740e-20
Identity = 46/97 (47.42%), Postives = 58/97 (59.79%), Query Frame = 0
Query:    1 MSRFSMADMGDVSLVLGTSATRDRGKETVTITQGRYTKSLLERYCVASCNSTYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRYDI 97
            M  F M DMG+V  V+G    RD    T+ I+QG Y + +L+RY +   N   TP  G ELS  QP++ LL  EEKQRFQ I GS +YL   TRYD+
Sbjct:    1 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEEKQRFQTITGSLLYLAQCTRYDL 97          
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Match: A0A6H5L0J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J0_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 7.490e-20
Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    1 MSRFSMADMGDVSLVLGTSATRDRGKETVTITQGRYTKSLLERYCVASCNSTYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRYDI 97
            M  F M DMG+V  V+G    RD    T+ I+QG Y + +L+RY +   N   TP  G ELS  QP++ LL  E+KQRFQAI GS +YL   TRYD+
Sbjct:  683 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDL 779          
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 7.710e-20
Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    1 MSRFSMADMGDVSLVLGTSATRDRGKETVTITQGRYTKSLLERYCVASCNSTYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRYDI 97
            M  F M DMG+V  V+G    RD    T+ I+QG Y + +L+RY +   N   TP  G ELS  QP++ LL  E+KQRFQAI GS +YL   TRYD+
Sbjct: 1217 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDL 1313          
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.010e-19
Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    1 MSRFSMADMGDVSLVLGTSATRDRGKETVTITQGRYTKSLLERYCVASCNSTYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRYDI 97
            M  F M DMG+V  V+G    RD    T+ I+QG Y + +L+RY +   N   TP  G ELS  QP++ LL  E+KQRFQAI GS +YL   TRYD+
Sbjct:  438 MDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDL 534          
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Match: A0A6H5JN29_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN29_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.180e-19
Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    1 MSRFSMADMGDVSLVLGTSATRDRGKETVTITQGRYTKSLLERYCVASCNSTYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRYDI 97
            M  F M DMG+V LV+G    RD    T+ I+QG Y + +L+RY +   N   TP  G ELS  QP++ LL  E+KQRFQ I GS +YL   +RYD+
Sbjct:  231 MDSFDMIDMGEVKLVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQTITGSLLYLAQCSRYDL 327          
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Match: A0A6H5JW03_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW03_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 3.590e-19
Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    1 MSRFSMADMGDVSLVLGTSATRDRGKETVTITQGRYTKSLLERYCVASCNSTYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRYD 96
            M  F M DMG+V  V+G +  RD    T+ I+QG Y + + +RY +   N   TP  G ELS  QP++ LL  E+KQRFQAI GS +YL   TRYD
Sbjct:  127 MDSFEMTDMGEVKRVIGIAVQRDYELGTLAISQGPYARDIQQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYD 222          
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Match: A0A6H5L4B4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4B4_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 3.620e-19
Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    1 MSRFSMADMGDVSLVLGTSATRDRGKETVTITQGRYTKSLLERYCVASCNSTYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRYDI 97
            M  F M +MG+V  V+G    RD    T+ I+QG Y + +L+RY +   N   TP  G ELS  QP++ LL  E+KQRFQAI GS +YL   TRYD+
Sbjct: 1130 MDSFEMTEMGEVMRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDL 1226          
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Match: A0A6H5KH19_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH19_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.270e-16
Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    3 RFSMADMGDVSLVLGTSATRDRGKETVTITQGRYTKSLLERYCVASCNSTYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRYDI 97
            RF MADMG+V  +LG    RD  + T+ I+Q  Y  +LLER+ +   N   TP  G E+S+ QP++ +L   +KQ +Q++ GS +YL   TR+D+
Sbjct:  421 RFEMADMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPRYGAEISMNQPQDQILGPTDKQIYQSMTGSTLYLAQCTRFDL 515          
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Match: A0A6H5L4Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y1_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.300e-16
Identity = 46/104 (44.23%), Postives = 60/104 (57.69%), Query Frame = 0
Query:    1 MSRFSMADMGDVSL-VLGTSATRDRGKETVTITQGRYTKSLLERYCVASCNSTYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRY---DIIHR 100
            M  F M DMG+V   V+G    RD    T+ I+QG Y + +L+RY +   N   TP  G ELS  QP++ LL  E+KQRFQAI GS +YL   T Y   D +H+
Sbjct:  684 MDSFEMTDMGEVKRGVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTGYHLSDAVHQ 787          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102258.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KCG4_9PHAE4.840e-2147.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KC04_9PHAE1.740e-2047.42Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0J0_9PHAE7.490e-2047.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHG5_9PHAE7.710e-2047.42Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5JF46_9PHAE1.010e-1947.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JN29_9PHAE1.180e-1946.39Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JW03_9PHAE3.590e-1946.88Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4B4_9PHAE3.620e-1946.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH19_9PHAE1.270e-1641.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4Y1_9PHAE1.300e-1644.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig102258contigL-digitata_M_contig102258:375..701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig102258.1.1mRNA_L-digitata_M_contig102258.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig102258 296..890 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig102258.1.1 ID=prot_L-digitata_M_contig102258.1.1|Name=mRNA_L-digitata_M_contig102258.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=109bp
MSRFSMADMGDVSLVLGTSATRDRGKETVTITQGRYTKSLLERYCVASCN
STYTPAVGKELSLGQPEEMLLSKEEKQRFQAIIGSAMYLGHATRYDIIHR
QPTGEGDV*
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