prot_L-digitata_M_contig10222.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10222.1.1
Unique Nameprot_L-digitata_M_contig10222.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length126
Homology
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BLAST of mRNA_L-digitata_M_contig10222.1.1 vs. uniprot
Match: A0A6H5LB76_9PHAE (PKD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LB76_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.220e-51
Identity = 91/129 (70.54%), Postives = 104/129 (80.62%), Query Frame = 0 
Query:    1 MAPSRPTSS---LRPWARLGAFAGLVLALQRPPACAALEILESVVDRDGDVLIVEDILEGFGRVPVSVDFSAVSDHMFIGFKAGAVRIYPDGGGTEMAAVYDTCVDMEDDVYDNNDLGLLNFRLHPDWP 126
            M  S PT++   L PWA   A AGL L  +  P+CA LE+LE+VVDRDGDVL+VEDILEGFGRVPVSV FS  + HMFIGFKAG VRIYPDGG T +AA+YD CVDMED+VY+NNDLGLLNF+LHPDWP
Sbjct:    1 MTLSSPTTTGLRLPPWACCLALAGLSLLTRNIPSCAGLEVLETVVDRDGDVLVVEDILEGFGRVPVSVAFSPTTTHMFIGFKAGGVRIYPDGGDTLVAAIYDDCVDMEDEVYENNDLGLLNFQLHPDWP 129
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10222.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LB76_9PHAE1.220e-5170.54PKD domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10222contigL-digitata_M_contig10222:1076..6458 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10222.1.1mRNA_L-digitata_M_contig10222.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10222 1070..6458 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10222.1.1 ID=prot_L-digitata_M_contig10222.1.1|Name=mRNA_L-digitata_M_contig10222.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=126bp
MAPSRPTSSLRPWARLGAFAGLVLALQRPPACAALEILESVVDRDGDVLI
VEDILEGFGRVPVSVDFSAVSDHMFIGFKAGAVRIYPDGGGTEMAAVYDT
CVDMEDDVYDNNDLGLLNFRLHPDWP
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