prot_L-digitata_M_contig102215.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-digitata_M_contig102215.2.1
Unique Name	prot_L-digitata_M_contig102215.2.1
Type	polypeptide
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length	109

Homology

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BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Match: A0A7V6YBC9_9PROT (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7V6YBC9_9PROT)

HSP 1 Score: 170 bits (430), Expect = 2.280e-51
Identity = 84/106 (79.25%), Postives = 91/106 (85.85%), Query Frame = 0

Query:    1 PLGTQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKLPLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTLEWPALDQD 106
            PLG  VPGL +ATLS+GANVVSG  Y  I ADMVDMETYA+KRA D F+LPLVALRGISDG  ELRHIDDWT+YLH+ID KLA AVDLLEAAIANGTLEWP+LD D
Sbjct:  113 PLGPLVPGLRRATLSTGANVVSGEQYRAIAADMVDMETYAIKRATDHFRLPLVALRGISDGDEELRHIDDWTRYLHIIDHKLAGAVDLLEAAIANGTLEWPSLDPD 218

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BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Match: A0A0Q7DVE5_9HYPH (5'-methylthioadenosine nucleosidase n=5 Tax=Hyphomicrobiales TaxID=356 RepID=A0A0Q7DVE5_9HYPH)

HSP 1 Score: 154 bits (390), Expect = 2.020e-45
Identity = 78/99 (78.79%), Postives = 86/99 (86.87%), Query Frame = 0

Query:    1 PLGTQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKLPLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTLE 99
            PLG  VPG+AKATLS+GANVVSG AY  I ADMVDMETYAV RAC RFK+PL+ALRGISDG  EL H+DDWT+YLHV+DEKLA AVDLLEAAIA+G LE
Sbjct:  113 PLGPFVPGIAKATLSTGANVVSGAAYQGIGADMVDMETYAVLRACQRFKVPLIALRGISDGNEELGHLDDWTRYLHVVDEKLAHAVDLLEAAIASGALE 211

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BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Match: UPI0006D762F2 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Devosia sp. A16 TaxID=1736675 RepID=UPI0006D762F2)

HSP 1 Score: 150 bits (378), Expect = 1.330e-43
Identity = 75/99 (75.76%), Postives = 85/99 (85.86%), Query Frame = 0

Query:    1 PLGTQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKLPLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTLE 99
            PLG  VP +AKATLS+GANVVSG AY  I+ADMVDMETYAV RAC RF LPL+ALRGISDG  EL H+DDWT+YLH++DEKLA AVDLLEAA++ GTLE
Sbjct:  113 PLGPFVPDIAKATLSTGANVVSGKAYDRINADMVDMETYAVLRACQRFGLPLIALRGISDGDEELGHLDDWTRYLHIVDEKLAHAVDLLEAALSAGTLE 211

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BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Match: UPI001BB053A9 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Devosia sp. BSSL-BM10 TaxID=2829817 RepID=UPI001BB053A9)

HSP 1 Score: 144 bits (364), Expect = 1.170e-41
Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 0

Query:    1 PLGTQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKLPLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTL 98
            PL  ++ GL  ATLS+GAN+VSG AYV +DADMVDMETYAV RAC  F +PLVALRGISDGA EL H+DDWTQYLH+IDEKLAAAVDL+E  +A G +
Sbjct:  100 PLSPRIAGLDGATLSTGANIVSGAAYVGVDADMVDMETYAVLRACQAFGVPLVALRGISDGAAELAHVDDWTQYLHIIDEKLAAAVDLIEVEMATGRI 197

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BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Match: UPI001CD099AE (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Devosia sp. CJK-A8-3 TaxID=2866214 RepID=UPI001CD099AE)

HSP 1 Score: 143 bits (360), Expect = 4.860e-41
Identity = 71/98 (72.45%), Postives = 82/98 (83.67%), Query Frame = 0

Query:    1 PLGTQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKLPLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTL 98
            PL   VPG+AKA LS+GA++VSG AY  IDADMVDMETYAV RAC  F +PL+ALRGISDGA EL H+ DWTQYLHVIDE+LAAAVD +EAA++ GTL
Sbjct:  100 PLPLSVPGIAKARLSTGADIVSGAAYDAIDADMVDMETYAVLRACQVFDVPLIALRGISDGAQELSHVTDWTQYLHVIDERLAAAVDQIEAAVSAGTL 197

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BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Match: UPI001F0576B3 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Devosia sp. JXJ CY 41 TaxID=2917991 RepID=UPI001F0576B3)

HSP 1 Score: 140 bits (354), Expect = 3.720e-40
Identity = 70/95 (73.68%), Postives = 79/95 (83.16%), Query Frame = 0

Query:    4 TQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKLPLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTL 98
            T + GL  ATLS+GAN+VSG AY  I ADMVDMETYAV RAC  F +PL+ALRGISDGA EL H+DDWTQYLH+IDEKLAAAVDL+EAA+A G L
Sbjct:  102 TTIAGLPTATLSTGANIVSGRAYDGIAADMVDMETYAVLRACQAFGVPLLALRGISDGASELGHVDDWTQYLHIIDEKLAAAVDLVEAAVAEGRL 196

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BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Match: UPI0010BFA147 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Rhizobium sp. FY34 TaxID=2562309 RepID=UPI0010BFA147)

HSP 1 Score: 140 bits (354), Expect = 5.860e-40
Identity = 69/98 (70.41%), Postives = 78/98 (79.59%), Query Frame = 0

Query:    1 PLGTQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKLPLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTL 98
            PL   +PGL  A LS+G N+VSG AY  IDADMVDMET+AV RAC RF +PL+ALRGISDG  ELRH+DDWTQYLHVIDEKLA AVDLL  A+ +G L
Sbjct:  113 PLPHGIPGLQSARLSTGGNIVSGQAYDGIDADMVDMETFAVLRACQRFAVPLIALRGISDGKAELRHVDDWTQYLHVIDEKLAQAVDLLSQALKSGDL 210

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BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Match: UPI001F3E2C39 (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Devosia sp. SL43 TaxID=2806348 RepID=UPI001F3E2C39)

HSP 1 Score: 140 bits (352), Expect = 7.690e-40
Identity = 70/98 (71.43%), Postives = 80/98 (81.63%), Query Frame = 0

Query:    1 PLGTQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKLPLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTL 98
            PL   +PGLA ATLS+GAN+VSG AY  I+ADMVDMETYAV RAC  F +PL+ALRGISDGA EL H+ DWTQYLH+IDEKLAAAVDL+EA +  G L
Sbjct:  100 PLRPLLPGLAGATLSTGANIVSGPAYDDIEADMVDMETYAVLRACQAFGVPLLALRGISDGAAELGHVSDWTQYLHIIDEKLAAAVDLVEAEVKAGRL 197

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BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Match: A0A1X7NQY7_9HYPH (Adenosylhomocysteine nucleosidase n=1 Tax=Mesorhizobium australicum TaxID=536018 RepID=A0A1X7NQY7_9HYPH)

HSP 1 Score: 140 bits (353), Expect = 9.280e-40
Identity = 71/98 (72.45%), Postives = 81/98 (82.65%), Query Frame = 0

Query:    1 PLGTQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKLPLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTL 98
            PL  ++PG+A ATLS+GAN+VSG AY  I ADMVDMET+AV RAC RF +PLVALRGISDGA +LRH+ DWT+YLHVIDEKLAAAVD L  AIA G L
Sbjct:  113 PLPLRIPGIAGATLSTGANIVSGAAYDGIGADMVDMETFAVLRACHRFGVPLVALRGISDGAADLRHVGDWTEYLHVIDEKLAAAVDRLAEAIAAGLL 210

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BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Match: A0A1L3SV85_9HYPH (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Aquibium oceanicum TaxID=1670800 RepID=A0A1L3SV85_9HYPH)

HSP 1 Score: 140 bits (352), Expect = 1.240e-39
Identity = 67/98 (68.37%), Postives = 81/98 (82.65%), Query Frame = 0

Query:    1 PLGTQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKLPLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTL 98
            PL  ++PG+ +ATLS+GANVVSG AY  I ADMVDMET+AV RAC +F +PL+ALRGISDGA ELRH+ DWT+YLHVIDE +A AVD LEAA+A G +
Sbjct:  116 PLPLRIPGIREATLSTGANVVSGPAYDAIQADMVDMETFAVLRACQKFDVPLIALRGISDGAAELRHVGDWTEYLHVIDENMAQAVDRLEAALAEGRI 213

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig102215.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7V6YBC9_9PROT	2.280e-51	79.25	5'-methylthioadenosine/S-adenosylhomocysteine nucl...	[more]
A0A0Q7DVE5_9HYPH	2.020e-45	78.79	5'-methylthioadenosine nucleosidase n=5 Tax=Hyphom...	[more]
UPI0006D762F2	1.330e-43	75.76	5'-methylthioadenosine/S-adenosylhomocysteine nucl...	[more]
UPI001BB053A9	1.170e-41	71.43	5'-methylthioadenosine/S-adenosylhomocysteine nucl...	[more]
UPI001CD099AE	4.860e-41	72.45	5'-methylthioadenosine/S-adenosylhomocysteine nucl...	[more]
UPI001F0576B3	3.720e-40	73.68	5'-methylthioadenosine/S-adenosylhomocysteine nucl...	[more]
UPI0010BFA147	5.860e-40	70.41	5'-methylthioadenosine/S-adenosylhomocysteine nucl...	[more]
UPI001F3E2C39	7.690e-40	71.43	5'-methylthioadenosine/S-adenosylhomocysteine nucl...	[more]
A0A1X7NQY7_9HYPH	9.280e-40	72.45	Adenosylhomocysteine nucleosidase n=1 Tax=Mesorhiz...	[more]
A0A1L3SV85_9HYPH	1.240e-39	68.37	5'-methylthioadenosine/S-adenosylhomocysteine nucl...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035994	Nucleoside phosphorylase superfamily	GENE3D	3.40.50.1580	Nucleoside phosphorylase domain	coord: 1..100 e-value: 7.4E-24 score: 86.0
IPR035994	Nucleoside phosphorylase superfamily	SUPERFAMILY	53167	Purine and uridine phosphorylases	coord: 7..86
IPR000845	Nucleoside phosphorylase domain	PFAM	PF01048	PNP_UDP_1	coord: 29..91 e-value: 1.6E-6 score: 27.6

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig102215	contig	L-digitata_M_contig102215:589..915 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig102215.2.1	mRNA_L-digitata_M_contig102215.2.1	Laminaria digitata LdigPH10_18mv male	mRNA	L-digitata_M_contig102215 589..915 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-digitata_M_contig102215.2.1 ID=prot_L-digitata_M_contig102215.2.1|Name=mRNA_L-digitata_M_contig102215.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=109bp
PLGTQVPGLAKATLSSGANVVSGNAYVPIDADMVDMETYAVKRACDRFKL
PLVALRGISDGAVELRHIDDWTQYLHVIDEKLAAAVDLLEAAIANGTLEW
PALDQDRP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035994	Nucleoside_phosphorylase_sf
IPR000845	Nucleoside_phosphorylase_d