prot_L-digitata_M_contig102182.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig102182.1.1
Unique Nameprot_L-digitata_M_contig102182.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length106
Homology
BLAST of mRNA_L-digitata_M_contig102182.1.1 vs. uniprot
Match: A0A6H5L089_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L089_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 5.390e-11
Identity = 33/100 (33.00%), Postives = 55/100 (55.00%), Query Frame = 0
Query:    7 AWKCLAERMPNTDLLDRVFAAQSPSGAWKMLRGWFLPKSIATQVKWSDVFDALQMEKGEEPMIFFSRVDKIVGILGSLGVQKSVGDVNRKLVRVLTHNYE 106
            AW  L E    +D+ + +FA      AW  +R W LP + A Q       + ++M  GE P +FF+RVD IV  + ++G++KS   + + +VR L+ +Y+
Sbjct:  447 AWGYLVESTSGSDIEETLFACSCVPEAWTAIREWSLPTTDAEQRLLERQLETVEMSPGENPKLFFARVDGIVNTMRAVGIEKSERQIVQTIVRQLSSDYD 546          
BLAST of mRNA_L-digitata_M_contig102182.1.1 vs. uniprot
Match: A0A6H5KIP6_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP6_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.350e-10
Identity = 31/100 (31.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:    7 AWKCLAERMPNTDLLDRVFAAQSPSGAWKMLRGWFLPKSIATQVKWSDVFDALQMEKGEEPMIFFSRVDKIVGILGSLGVQKSVGDVNRKLVRVLTHNYE 106
            AW  + E    TD+ +R+ A      AW ++  W LP   A +       + ++M  GE+P +FF+RVD ++ I+ ++G++KS   +   +VR L H Y+
Sbjct:  129 AWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYD 228          
BLAST of mRNA_L-digitata_M_contig102182.1.1 vs. uniprot
Match: A0A6H5JNE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE4_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.360e-10
Identity = 31/100 (31.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:    7 AWKCLAERMPNTDLLDRVFAAQSPSGAWKMLRGWFLPKSIATQVKWSDVFDALQMEKGEEPMIFFSRVDKIVGILGSLGVQKSVGDVNRKLVRVLTHNYE 106
            AW  + E    TD+ +R+ A      AW ++  W LP   A +       + ++M  GE+P +FF+RVD ++ I+ ++G++KS   +   +VR L H Y+
Sbjct:  184 AWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYD 283          
BLAST of mRNA_L-digitata_M_contig102182.1.1 vs. uniprot
Match: A0A6H5L4A7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A7_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.370e-10
Identity = 31/100 (31.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:    7 AWKCLAERMPNTDLLDRVFAAQSPSGAWKMLRGWFLPKSIATQVKWSDVFDALQMEKGEEPMIFFSRVDKIVGILGSLGVQKSVGDVNRKLVRVLTHNYE 106
            AW  + E    TD+ +R+ A      AW ++  W LP   A +       + ++M  GE+P +FF+RVD ++ I+ ++G++KS   +   +VR L H Y+
Sbjct:  129 AWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYD 228          
BLAST of mRNA_L-digitata_M_contig102182.1.1 vs. uniprot
Match: A0A6H5KYI1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI1_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.380e-10
Identity = 31/100 (31.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:    7 AWKCLAERMPNTDLLDRVFAAQSPSGAWKMLRGWFLPKSIATQVKWSDVFDALQMEKGEEPMIFFSRVDKIVGILGSLGVQKSVGDVNRKLVRVLTHNYE 106
            AW  + E    TD+ +R+ A      AW ++  W LP   A +       + ++M  GE+P +FF+RVD ++ I+ ++G++KS   +   +VR L H Y+
Sbjct:  129 AWGYMLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYD 228          
BLAST of mRNA_L-digitata_M_contig102182.1.1 vs. uniprot
Match: A0A6H5JQJ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ2_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 3.460e-10
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   11 LAERMPNTDLLDRVFAAQSPSGAWKMLRGWFLPKSIATQVKWSDVFDALQMEKGEEPMIFFSRVDKIVGILGSLGVQKSVGDVNRKLVRVLTHNYE 106
            + E    TD+ +R+ A      AW ++  W LP   A +       + ++M  GE+P +FF+RVD ++ I+ ++G++KS   +   +VR L H Y+
Sbjct:    1 MLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHKYD 96          
BLAST of mRNA_L-digitata_M_contig102182.1.1 vs. uniprot
Match: A0A6H5K4K8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4K8_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.540e-9
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   11 LAERMPNTDLLDRVFAAQSPSGAWKMLRGWFLPKSIATQVKWSDVFDALQMEKGEEPMIFFSRVDKIVGILGSLGVQKSVGDVNRKLVRVLTHNYE 106
            + E    TD+ +R+ A      AW ++  W LP   A +       + ++M  GE+P +FF+RVD ++ I+ ++G++KS   +   +VR L H Y+
Sbjct:    1 MLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYD 96          
BLAST of mRNA_L-digitata_M_contig102182.1.1 vs. uniprot
Match: A0A6H5JQ49_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ49_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 3.890e-9
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   11 LAERMPNTDLLDRVFAAQSPSGAWKMLRGWFLPKSIATQVKWSDVFDALQMEKGEEPMIFFSRVDKIVGILGSLGVQKSVGDVNRKLVRVLTHNYE 106
            + E    TD+ +R+ A      AW ++  W LP   A +       + ++M  GE+P +FF+RVD ++ I+ ++G++KS   +   +VR L H Y+
Sbjct:    1 MLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYD 96          
BLAST of mRNA_L-digitata_M_contig102182.1.1 vs. uniprot
Match: A0A6H5JS28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS28_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 4.010e-9
Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   11 LAERMPNTDLLDRVFAAQSPSGAWKMLRGWFLPKSIATQVKWSDVFDALQMEKGEEPMIFFSRVDKIVGILGSLGVQKSVGDVNRKLVRVLTHNYE 106
            + E    TD+ +R+ A      AW ++  W LP   A +       + ++M  GE+P +FF+RVD ++ I+ ++G++KS   +   +VR L H Y+
Sbjct:    1 MLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYD 96          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102182.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5L089_9PHAE5.390e-1133.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KIP6_9PHAE1.350e-1031.00CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JNE4_9PHAE1.360e-1031.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4A7_9PHAE1.370e-1031.00CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KYI1_9PHAE1.380e-1031.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQJ2_9PHAE3.460e-1030.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K4K8_9PHAE1.540e-930.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQ49_9PHAE3.890e-930.21Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS28_9PHAE4.010e-930.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 2..106
e-value: 3.4E-8
score: 33.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig102182contigL-digitata_M_contig102182:481..798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig102182.1.1mRNA_L-digitata_M_contig102182.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig102182 481..798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig102182.1.1 ID=prot_L-digitata_M_contig102182.1.1|Name=mRNA_L-digitata_M_contig102182.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=106bp
IKKSRIAWKCLAERMPNTDLLDRVFAAQSPSGAWKMLRGWFLPKSIATQV
KWSDVFDALQMEKGEEPMIFFSRVDKIVGILGSLGVQKSVGDVNRKLVRV
LTHNYE
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