prot_L-digitata_M_contig102063.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig102063.1.1
Unique Nameprot_L-digitata_M_contig102063.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length127
Homology
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Match: A0A520NRF9_9PROT (Gentisate 1,2-dioxygenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NRF9_9PROT)

HSP 1 Score: 253 bits (646), Expect = 1.150e-81
Identity = 118/126 (93.65%), Postives = 121/126 (96.03%), Query Frame = 0
Query:    1 MTTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDESVYELTIQDQPLNIFMESLLWQESLKEPWSVLGANSGFETNAAELLEAGE 126
            MTTRFNGTTPNFFATMTVRPP IVD+PHRH+SSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDE VYELTIQDQPLNIFMESLLWQE LK+PWSVLGANSGFETNA EL EAGE
Sbjct:  257 MTTRFNGTTPNFFATMTVRPPKIVDKPHRHVSSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDEPVYELTIQDQPLNIFMESLLWQEDLKQPWSVLGANSGFETNAEELREAGE 382          
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Match: A0A2S6Q5D9_9PROT (5-nitrosalicylic acid 1,2-dioxygenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6Q5D9_9PROT)

HSP 1 Score: 251 bits (640), Expect = 9.300e-81
Identity = 115/126 (91.27%), Postives = 121/126 (96.03%), Query Frame = 0
Query:    1 MTTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDESVYELTIQDQPLNIFMESLLWQESLKEPWSVLGANSGFETNAAELLEAGE 126
            MTTRFNGTTPNFFATMTVRPP IVD+PHRH+SSA+NYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWG+HNHASYDESVYELT+QDQPLNIFMESLLWQE LK PWSVLGANSGFETNA EL +AGE
Sbjct:  257 MTTRFNGTTPNFFATMTVRPPKIVDRPHRHVSSAINYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGIHNHASYDESVYELTVQDQPLNIFMESLLWQEELKHPWSVLGANSGFETNAEELRQAGE 382          
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Match: A0A537TUL6_9PROT (Cupin domain-containing protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TUL6_9PROT)

HSP 1 Score: 211 bits (537), Expect = 2.130e-65
Identity = 95/124 (76.61%), Postives = 110/124 (88.71%), Query Frame = 0
Query:    1 MTTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDESVYELTIQDQPLNIFMESLLWQESLKEPWSVLGANSGFETNAAELLEA 124
            MT R NG TP+FFAT+T+RPP IVD+PHRH S+A+NYYFHG GRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDE VYELT+QDQPLNI+MESLLWQE LK P ++LG+ +GF+TN A++  A
Sbjct:  243 MTGRTNGCTPSFFATITIRPPKIVDRPHRHTSAAINYYFHGRGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDEPVYELTVQDQPLNIYMESLLWQEDLKHPAALLGSEAGFDTNRAQIAAA 366          
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Match: UPI00159CC179 (AraC family ligand binding domain-containing protein n=1 Tax=Sphingobium sp. 15-1 TaxID=2729616 RepID=UPI00159CC179)

HSP 1 Score: 211 bits (536), Expect = 2.770e-65
Identity = 100/119 (84.03%), Postives = 107/119 (89.92%), Query Frame = 0
Query:    1 MTTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDESVYELTIQDQPLNIFMESLLWQESLKEPWSVLGANSGFETNAA 119
            MT R NGTTPNFFATMTVRPP IVD+PHRH S+A+NYYF G+GRSTVEGKVYEWKAGDLMLSAPGW VHNHAS+DE VYELTIQDQPLNI MESLLWQESLKEP ++LGA  GFETN A
Sbjct:  242 MTGRTNGTTPNFFATMTVRPPKIVDRPHRHSSAAVNYYFSGSGRSTVEGKVYEWKAGDLMLSAPGWSVHNHASFDEPVYELTIQDQPLNIAMESLLWQESLKEPPALLGAEEGFETNRA 360          
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Match: A0A0M4CVW5_SPHS1 (Gentisate 1,2-dioxygenase n=1 Tax=Sphingopyxis sp. (strain 113P3) TaxID=292913 RepID=A0A0M4CVW5_SPHS1)

HSP 1 Score: 209 bits (532), Expect = 1.110e-64
Identity = 99/119 (83.19%), Postives = 106/119 (89.08%), Query Frame = 0
Query:    1 MTTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDESVYELTIQDQPLNIFMESLLWQESLKEPWSVLGANSGFETNAA 119
            MT R NGTTPNFFATMTVRPP IVD+PHRH S+A+NYYF G+GRSTVEGK YEWKAGDLMLSAPGW VHNHASYDE+VYELTIQDQPLNI MESLLWQESLKEP ++LGA  GF TN A
Sbjct:  242 MTGRTNGTTPNFFATMTVRPPKIVDRPHRHSSAAVNYYFTGSGRSTVEGKTYEWKAGDLMLSAPGWAVHNHASYDEAVYELTIQDQPLNIAMESLLWQESLKEPPALLGAEEGFRTNRA 360          
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Match: A0A2E8YRU8_9PROT (Cupin_2 domain-containing protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A2E8YRU8_9PROT)

HSP 1 Score: 200 bits (508), Expect = 7.700e-64
Identity = 91/122 (74.59%), Postives = 107/122 (87.70%), Query Frame = 0
Query:    1 MTTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYD-ESVYELTIQDQPLNIFMESLLWQESLKEPWSVLGANSGFETNAAEL 121
            MT R NGTTPNFFAT+T+RPP IVD+PHRH+S+AMNY F G GRSTVEGKVYEW++GDL+L+APGWGVHNHAS   + +YELTIQDQPLNI MESLLWQE LK+PWSVLG  +GF+TN A++
Sbjct:   29 MTGRTNGTTPNFFATITIRPPGIVDKPHRHVSAAMNYIFQGEGRSTVEGKVYEWQSGDLLLTAPGWGVHNHASTGTDPIYELTIQDQPLNIVMESLLWQEDLKKPWSVLGTETGFDTNRAKI 150          
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Match: UPI001F585A87 (cupin domain-containing protein n=1 Tax=Sphingobium sp. Sx8-8 TaxID=2933617 RepID=UPI001F585A87)

HSP 1 Score: 206 bits (525), Expect = 1.260e-63
Identity = 98/119 (82.35%), Postives = 105/119 (88.24%), Query Frame = 0
Query:    1 MTTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDESVYELTIQDQPLNIFMESLLWQESLKEPWSVLGANSGFETNAA 119
            MT R NGTTPNFFATMTVRPP IVD+PHRH S+A+NYYF G+GRSTV+GK YEWKAGDLMLSAPGW VHNHASYDE VYELTIQDQPLNI MESLLWQESLKEP ++LGA  GF TN A
Sbjct:  242 MTGRTNGTTPNFFATMTVRPPKIVDRPHRHSSAAVNYYFSGSGRSTVDGKTYEWKAGDLMLSAPGWSVHNHASYDEPVYELTIQDQPLNIAMESLLWQESLKEPPALLGAEEGFLTNRA 360          
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Match: A0A0Q8Q8X4_9SPHN (Gentisate 1,2-dioxygenase n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A0Q8Q8X4_9SPHN)

HSP 1 Score: 206 bits (523), Expect = 2.520e-63
Identity = 97/119 (81.51%), Postives = 105/119 (88.24%), Query Frame = 0
Query:    1 MTTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDESVYELTIQDQPLNIFMESLLWQESLKEPWSVLGANSGFETNAA 119
            MT R NGTTPNFFAT+T+RPP IVD+PHRH S+A+NYYF G+GRSTVEGK YEWKAGDLMLSAPGW VHNHASYDE VYELTIQDQPLNI MESLLWQESLKEP ++LGA  GF TN A
Sbjct:  242 MTGRTNGTTPNFFATITMRPPKIVDRPHRHSSAAVNYYFSGSGRSTVEGKTYEWKAGDLMLSAPGWSVHNHASYDEPVYELTIQDQPLNIAMESLLWQESLKEPPALLGAEEGFATNRA 360          
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Match: G6EJC7_9SPHN (Gentisate 1 2-dioxygenase-like protein n=1 Tax=Novosphingobium pentaromativorans US6-1 TaxID=1088721 RepID=G6EJC7_9SPHN)

HSP 1 Score: 205 bits (522), Expect = 3.460e-63
Identity = 96/120 (80.00%), Postives = 105/120 (87.50%), Query Frame = 0
Query:    2 TTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDESVYELTIQDQPLNIFMESLLWQESLKEPWSVLGANSGFETNAAEL 121
            T R NGTTPNFFATMT+RPP IVD+PHRH S+A+NYYF G+GRSTVEGKVYEWKAGDLMLSAPGW VHNHAS+DE VYELTIQDQPLNI MESLLWQESLKEP ++LG   GF TN  E+
Sbjct:  242 TGRTNGTTPNFFATMTLRPPKIVDRPHRHSSAAINYYFSGSGRSTVEGKVYEWKAGDLMLSAPGWAVHNHASFDEPVYELTIQDQPLNIVMESLLWQESLKEPPALLGVQQGFATNRVEV 361          
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Match: A0A397P623_9SPHN (Gentisate 1,2-dioxygenase n=3 Tax=Sphingomonadales TaxID=204457 RepID=A0A397P623_9SPHN)

HSP 1 Score: 204 bits (520), Expect = 7.510e-63
Identity = 96/117 (82.05%), Postives = 103/117 (88.03%), Query Frame = 0
Query:    1 MTTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGKVYEWKAGDLMLSAPGWGVHNHASYDESVYELTIQDQPLNIFMESLLWQESLKEPWSVLGANSGFETN 117
            MT R NGTTP+FFATMTVRPP IVD+PHRH S+A+NYYF G GRSTVEGK YEWKAGDLMLSAPGW +HNHASYDE VYELTIQDQPLNI MESLLWQESLKEP ++LGA  GF TN
Sbjct:  244 MTGRTNGTTPSFFATMTVRPPKIVDRPHRHSSAAVNYYFSGAGRSTVEGKTYEWKAGDLMLSAPGWSIHNHASYDEPVYELTIQDQPLNIAMESLLWQESLKEPPALLGAEEGFATN 360          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102063.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A520NRF9_9PROT1.150e-8193.65Gentisate 1,2-dioxygenase n=1 Tax=Rhodospirillacea... [more]
A0A2S6Q5D9_9PROT9.300e-8191.275-nitrosalicylic acid 1,2-dioxygenase n=3 Tax=Alph... [more]
A0A537TUL6_9PROT2.130e-6576.61Cupin domain-containing protein n=4 Tax=Alphaprote... [more]
UPI00159CC1792.770e-6584.03AraC family ligand binding domain-containing prote... [more]
A0A0M4CVW5_SPHS11.110e-6483.19Gentisate 1,2-dioxygenase n=1 Tax=Sphingopyxis sp.... [more]
A0A2E8YRU8_9PROT7.700e-6474.59Cupin_2 domain-containing protein n=1 Tax=Rhodospi... [more]
UPI001F585A871.260e-6382.35cupin domain-containing protein n=1 Tax=Sphingobiu... [more]
A0A0Q8Q8X4_9SPHN2.520e-6381.51Gentisate 1,2-dioxygenase n=2 Tax=Sphingomonadacea... [more]
G6EJC7_9SPHN3.460e-6380.00Gentisate 1 2-dioxygenase-like protein n=1 Tax=Nov... [more]
A0A397P623_9SPHN7.510e-6382.05Gentisate 1,2-dioxygenase n=3 Tax=Sphingomonadales... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 1..119
e-value: 3.1E-18
score: 67.7
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 8..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig102063contigL-digitata_M_contig102063:122..502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig102063.1.1mRNA_L-digitata_M_contig102063.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig102063 5..502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig102063.1.1 ID=prot_L-digitata_M_contig102063.1.1|Name=mRNA_L-digitata_M_contig102063.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=127bp
MTTRFNGTTPNFFATMTVRPPNIVDQPHRHISSAMNYYFHGTGRSTVEGK
VYEWKAGDLMLSAPGWGVHNHASYDESVYELTIQDQPLNIFMESLLWQES
LKEPWSVLGANSGFETNAAELLEAGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf