prot_L-digitata_M_contig101987.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig101987.2.1
Unique Nameprot_L-digitata_M_contig101987.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length106
Homology
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Match: A0A2E8XSL4_9PROT (Long-chain fatty acid--CoA ligase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XSL4_9PROT)

HSP 1 Score: 196 bits (497), Expect = 6.140e-58
Identity = 93/105 (88.57%), Postives = 97/105 (92.38%), Query Frame = 0
Query:    1 MQGYWNAPELTAETLLDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKENDRKADLA 105
            MQGYWNAPELTAETL DGW HTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEG LVFEPE++QAMV+GDKRPHLVAVLVPD+ FI  WA ENDR ADLA
Sbjct:  426 MQGYWNAPELTAETLRDGWVHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGALVFEPEINQAMVHGDKRPHLVAVLVPDDDFIRKWAAENDRAADLA 530          
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Match: A0A2E7I5D2_9PROT (Long-chain fatty acid--CoA ligase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E7I5D2_9PROT)

HSP 1 Score: 185 bits (469), Expect = 1.770e-53
Identity = 85/105 (80.95%), Postives = 93/105 (88.57%), Query Frame = 0
Query:    1 MQGYWNAPELTAETLLDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKENDRKADLA 105
            MQGYWNAP+LTAETL +GW HTGDIGV D DGYIKITDRKKDIIVNSGGDN+SPQRVEG LVFEPE++QAMVYGDKRPHLVA+LVPD+ F  SW  +NDR  DLA
Sbjct:  426 MQGYWNAPDLTAETLREGWIHTGDIGVRDADGYIKITDRKKDIIVNSGGDNISPQRVEGALVFEPEINQAMVYGDKRPHLVALLVPDDEFFRSWTNDNDRDVDLA 530          
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Match: A0A848W506_9PROT (AMP-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W506_9PROT)

HSP 1 Score: 174 bits (442), Expect = 2.330e-53
Identity = 81/104 (77.88%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    1 MQGYWNAPELTAETLLDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKENDRKADL 104
            MQGYWNAP+L+AE L DGW HTGDI  LD DGYIKITDRKKDIIVNSGGDNVSPQRVE  L F PE++QAMVYGDKRPHLVAVLVPDE F++ W KEN    DL
Sbjct:   31 MQGYWNAPDLSAEALKDGWVHTGDIAELDADGYIKITDRKKDIIVNSGGDNVSPQRVENALTFAPEIAQAMVYGDKRPHLVAVLVPDEEFVAKWTKENGHDRDL 134          
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Match: A0A2E7PK40_9PROT (Long-chain fatty acid--CoA ligase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PK40_9PROT)

HSP 1 Score: 183 bits (464), Expect = 9.700e-53
Identity = 86/105 (81.90%), Postives = 94/105 (89.52%), Query Frame = 0
Query:    1 MQGYWNAPELTAETLLDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKENDRKADLA 105
            MQGYWNAP+LTA+TL DGW HTGDIG+LD DGYIKITDRKKDIIVNSGGDNVSPQRVEG LVFEPE++QAMVYGDKRPHLVAVLVPD  F+ SW+  NDR A+ A
Sbjct:  428 MQGYWNAPDLTAKTLQDGWVHTGDIGLLDADGYIKITDRKKDIIVNSGGDNVSPQRVEGALVFEPEINQAMVYGDKRPHLVAVLVPDAEFVRSWSGVNDRDANPA 532          
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Match: UPI001A0A6BE0 (AMP-binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A0A6BE0)

HSP 1 Score: 165 bits (418), Expect = 2.260e-49
Identity = 73/105 (69.52%), Postives = 89/105 (84.76%), Query Frame = 0
Query:    1 MQGYWNAPELTAETLLDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKENDRKADLA 105
            M GYWN P +TAET++DGW HTGDIGV D+DG + ITDRKKDIIVNSGGDN+SPQRVEG+L  EPE+ QAMVYGD+RPHLVA +VPD+ F+S+W K+ +  A+LA
Sbjct:   63 MNGYWNNPRVTAETIVDGWLHTGDIGVFDDDGCLVITDRKKDIIVNSGGDNISPQRVEGMLTVEPEIGQAMVYGDRRPHLVAPIVPDQDFVSAWGKDREGAANLA 167          
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Match: A0A2D8PTM2_9PROT (Long-chain fatty acid--CoA ligase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PTM2_9PROT)

HSP 1 Score: 167 bits (422), Expect = 9.200e-47
Identity = 73/104 (70.19%), Postives = 87/104 (83.65%), Query Frame = 0
Query:    1 MQGYWNAPELTAETLLDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKENDRKADL 104
            MQGYWN P+ TAET+ DGW HTGDIG  DEDG++ ITDRKKDIIVNSGGDN+SPQR+EG L  +PE++QAMVYGDK+PHLVA++VPD  F+S W KEN   A+L
Sbjct:  414 MQGYWNMPDATAETISDGWLHTGDIGKFDEDGFLMITDRKKDIIVNSGGDNISPQRIEGFLTLQPEIAQAMVYGDKKPHLVALIVPDPDFVSDWKKENGSDANL 517          
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Match: A0A2E4XN73_9PROT (Long-chain fatty acid--CoA ligase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XN73_9PROT)

HSP 1 Score: 167 bits (422), Expect = 1.040e-46
Identity = 75/98 (76.53%), Postives = 85/98 (86.73%), Query Frame = 0
Query:    1 MQGYWNAPELTAETLLDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKEN 98
            MQGYWN PE TAET+ DGW HTGDIG +DEDGYI+ITDRKKDIIVNSGGDNV+PQRVEG+L  EPE++QAMVYGDKRPHLVA++VPD  F + W K N
Sbjct:  423 MQGYWNNPEATAETIRDGWLHTGDIGEIDEDGYIRITDRKKDIIVNSGGDNVAPQRVEGMLTIEPEIAQAMVYGDKRPHLVALIVPDTDFANDWVKAN 520          
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Match: A0A0F2S5N8_9PROT (AMP-dependent synthetase n=1 Tax=Rhodospirillaceae bacterium BRH_c57 TaxID=1629718 RepID=A0A0F2S5N8_9PROT)

HSP 1 Score: 164 bits (416), Expect = 6.410e-46
Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 0
Query:    1 MQGYWNAPELTAETL-LDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKENDRKADLA 105
            M+GYWN PE TA+ +  DGW HTGDIG LD+DG+++ITDRKKDIIVNSGGDNVSPQRVEG L  EPE+ Q MVYGDKRPHLVA++VPD  F+++WA+ +DR+ DLA
Sbjct:  408 MRGYWNNPEATAQVIDADGWLHTGDIGALDDDGFLRITDRKKDIIVNSGGDNVSPQRVEGFLCLEPEIGQVMVYGDKRPHLVALVVPDADFVTAWARTHDREPDLA 513          
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Match: A0A2S6TFI8_9PROT (Long-chain-fatty-acid--CoA ligase FadD15 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin2 TaxID=2013075 RepID=A0A2S6TFI8_9PROT)

HSP 1 Score: 164 bits (416), Expect = 7.520e-46
Identity = 75/105 (71.43%), Postives = 87/105 (82.86%), Query Frame = 0
Query:    1 MQGYWNAPELTAETLLDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKENDRKADLA 105
            MQGYWN P+ TAET+  GW HTGDIG +DEDGYI+ITDRKKDIIVNSGGDNVSPQRVEG L  EPE++QAMV+GDKRPHLVA++VPDE F   WAK +  + D +
Sbjct:  423 MQGYWNNPDATAETIKGGWLHTGDIGKIDEDGYIQITDRKKDIIVNSGGDNVSPQRVEGFLTVEPEIAQAMVHGDKRPHLVAIIVPDEEFAVGWAKSHGVEYDFS 527          
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Match: A0A2E4NAU1_9PROT (Long-chain fatty acid--CoA ligase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4NAU1_9PROT)

HSP 1 Score: 164 bits (415), Expect = 1.030e-45
Identity = 74/104 (71.15%), Postives = 85/104 (81.73%), Query Frame = 0
Query:    1 MQGYWNAPELTAETLLDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGDNVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKENDRKADL 104
            M+GYWN P  T ET+ DGW HTGDIGVLDEDG+I+ITDRKKDIIVNSGGDN+SP RVEG+L  EPE+ QAMV GD+RPHLV ++VP + F   WAKEND  ADL
Sbjct:  422 MEGYWNLPNETGETIRDGWLHTGDIGVLDEDGFIQITDRKKDIIVNSGGDNISPARVEGMLTAEPEIEQAMVQGDRRPHLVGLIVPSQDFADRWAKENDTSADL 525          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101987.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8XSL4_9PROT6.140e-5888.57Long-chain fatty acid--CoA ligase (Fragment) n=1 T... [more]
A0A2E7I5D2_9PROT1.770e-5380.95Long-chain fatty acid--CoA ligase n=1 Tax=Alphapro... [more]
A0A848W506_9PROT2.330e-5377.88AMP-binding protein n=1 Tax=Alphaproteobacteria ba... [more]
A0A2E7PK40_9PROT9.700e-5381.90Long-chain fatty acid--CoA ligase n=1 Tax=Rhodospi... [more]
UPI001A0A6BE02.260e-4969.52AMP-binding protein n=1 Tax=Proteobacteria bacteri... [more]
A0A2D8PTM2_9PROT9.200e-4770.19Long-chain fatty acid--CoA ligase n=1 Tax=Rhodospi... [more]
A0A2E4XN73_9PROT1.040e-4676.53Long-chain fatty acid--CoA ligase n=1 Tax=Rhodospi... [more]
A0A0F2S5N8_9PROT6.410e-4669.81AMP-dependent synthetase n=1 Tax=Rhodospirillaceae... [more]
A0A2S6TFI8_9PROT7.520e-4671.43Long-chain-fatty-acid--CoA ligase FadD15 n=1 Tax=A... [more]
A0A2E4NAU1_9PROT1.030e-4571.15Long-chain fatty acid--CoA ligase n=2 Tax=Rhodospi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 1..45
e-value: 6.1E-17
score: 61.3
IPR042099ANL, N-terminal domainGENE3D3.40.50.12780coord: 1..42
e-value: 3.7E-16
score: 60.8
NoneNo IPR availablePANTHERPTHR43272LONG-CHAIN-FATTY-ACID--COA LIGASEcoord: 1..101
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 1..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101987contigL-digitata_M_contig101987:523..840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101987.2.1mRNA_L-digitata_M_contig101987.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig101987 304..918 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig101987.2.1 ID=prot_L-digitata_M_contig101987.2.1|Name=mRNA_L-digitata_M_contig101987.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=106bp
MQGYWNAPELTAETLLDGWGHTGDIGVLDEDGYIKITDRKKDIIVNSGGD
NVSPQRVEGILVFEPELSQAMVYGDKRPHLVAVLVPDEAFISSWAKENDR
KADLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
IPR042099ANL_N_sf