prot_L-digitata_M_contig101936.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig101936.1.1
Unique Nameprot_L-digitata_M_contig101936.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length76
Homology
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Match: D8LEU4_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU4_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 1.110e-35
Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 0
Query:    1 DGDEVVLRRTIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDEVVLRR IG+KKDEFFLN KRVTKQEVSSLLESAGFSK+NPYYIVQQGKVS LTLMKDAERLNLLKEVAGTKV
Sbjct:   93 DGDEVVLRRNIGMKKDEFFLNLKRVTKQEVSSLLESAGFSKANPYYIVQQGKVSALTLMKDAERLNLLKEVAGTKV 168          
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Match: A0A836CH46_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH46_9STRA)

HSP 1 Score: 135 bits (339), Expect = 3.840e-35
Identity = 70/76 (92.11%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    1 DGDEVVLRRTIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDEVVLRRTIGLKKDEFFLNRKRVTK +VSSLLESAGFSKSNPYYIVQQGKVS LT+M D ERLNLLKEVAGTKV
Sbjct:   93 DGDEVVLRRTIGLKKDEFFLNRKRVTKADVSSLLESAGFSKSNPYYIVQQGKVSALTMMHDTERLNLLKEVAGTKV 168          
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Match: A0A7S1U8S3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8S3_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.380e-34
Identity = 67/76 (88.16%), Postives = 72/76 (94.74%), Query Frame = 0
Query:    1 DGDEVVLRRTIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDE+VLRRT+GLKKDEFFLNR+RVTK EV SLLESAGFSKSNPYYIVQQGKV+ L LMKD+ERLNLLKEVAGTKV
Sbjct:   93 DGDEIVLRRTVGLKKDEFFLNRRRVTKGEVGSLLESAGFSKSNPYYIVQQGKVNALCLMKDSERLNLLKEVAGTKV 168          
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Match: A0A7S2F438_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F438_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.300e-34
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 0
Query:    1 DGDEVVLRRTIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDEVVLRRTIGLKKDEFFLNRKRVTK EVSSLLESAGFSKSNPYYIVQQGKV+ L LMKD ERL LLKEV GT+V
Sbjct:  113 DGDEVVLRRTIGLKKDEFFLNRKRVTKSEVSSLLESAGFSKSNPYYIVQQGKVNALCLMKDQERLQLLKEVGGTRV 188          
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Match: A0A6H5KK26_9PHAE (SMC_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK26_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 7.370e-34
Identity = 71/93 (76.34%), Postives = 73/93 (78.49%), Query Frame = 0
Query:    1 DGDEVVLRRTIGLKKDEFFLNRKRVTKQEV-----------------SSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDEVVLRR IG+KKDEFFLN KRVTKQEV                 SSLLESAGFSK+NPYYIVQQGKVS LTLMKDAERLNLLKEVAGTKV
Sbjct:   93 DGDEVVLRRNIGMKKDEFFLNLKRVTKQEVGGKEEEFDRGVIGALKVSSLLESAGFSKANPYYIVQQGKVSALTLMKDAERLNLLKEVAGTKV 185          
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Match: W7T3Q8_9STRA (Structural maintenance of chromosomes protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3Q8_9STRA)

HSP 1 Score: 131 bits (329), Expect = 8.580e-34
Identity = 67/76 (88.16%), Postives = 74/76 (97.37%), Query Frame = 0
Query:    1 DGDEVVLRRTIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            +GDEVVLRRTIG+KKDEFFLNRKRVTKQEVSSLLESAGFS+SNPYYIVQQGKV+ LTLM+D +RL+LLKEVAGTKV
Sbjct:   93 EGDEVVLRRTIGVKKDEFFLNRKRVTKQEVSSLLESAGFSRSNPYYIVQQGKVNMLTLMRDDQRLDLLKEVAGTKV 168          
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Match: A0A7R9U6Y3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Y3_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.500e-33
Identity = 65/76 (85.53%), Postives = 70/76 (92.11%), Query Frame = 0
Query:    1 DGDEVVLRRTIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            DGDE+VLRRT+GLKKDEFFLNR+RV K EV SLLESAGFSKSNPYYIV+QGKV+ L LMKD ERLNLLKEVAGTKV
Sbjct:   93 DGDEIVLRRTVGLKKDEFFLNRRRVRKGEVESLLESAGFSKSNPYYIVEQGKVNALCLMKDTERLNLLKEVAGTKV 168          
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Match: A0A397B2P4_9STRA (SMC_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B2P4_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.450e-31
Identity = 60/76 (78.95%), Postives = 69/76 (90.79%), Query Frame = 0
Query:    1 DGDEVVLRRTIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            D ++VVLRRTIG+KKDEFFLNRK +TKQ+V+ LLESAGFS+SNPYYIVQQGKV+ L LMKD ERL LLK+VAGTKV
Sbjct:   93 DTEDVVLRRTIGVKKDEFFLNRKHITKQDVNHLLESAGFSRSNPYYIVQQGKVNALALMKDKERLELLKDVAGTKV 168          
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Match: A0A7S1UX63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UX63_9STRA)

HSP 1 Score: 116 bits (290), Expect = 7.300e-31
Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 DGDEVVLRRTIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            + DEVVLRRT+G KKDEFFL RKR TK EV SLLE AGFSKSNPYYIVQQGKV+ L +M D+ERLNLLKEVAGT V
Sbjct:   70 NSDEVVLRRTVGHKKDEFFLQRKRATKSEVLSLLEGAGFSKSNPYYIVQQGKVNALCVMNDSERLNLLKEVAGTTV 145          
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Match: A0A7S1CD09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD09_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.410e-30
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 0
Query:    1 DGDEVVLRRTIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQGKVSTLTLMKDAERLNLLKEVAGTKV 76
            D +EVVLRRTIGLKKDE+F+NRKR+ K +V +LLESAGFS+SNPYYIVQQGKV+ L  MKD ERL LLKEVAGT V
Sbjct:   28 DHEEVVLRRTIGLKKDEYFMNRKRIRKSDVVNLLESAGFSRSNPYYIVQQGKVAALCTMKDRERLQLLKEVAGTTV 103          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101936.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEU4_ECTSI1.110e-3593.42Structural maintenance of chromosomes protein n=1 ... [more]
A0A836CH46_9STRA3.840e-3592.11Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S1U8S3_9STRA3.380e-3488.16Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2F438_9STRA5.300e-3489.47Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A6H5KK26_9PHAE7.370e-3476.34SMC_N domain-containing protein n=1 Tax=Ectocarpus... [more]
W7T3Q8_9STRA8.580e-3488.16Structural maintenance of chromosomes protein n=2 ... [more]
A0A7R9U6Y3_9STRA7.500e-3385.53Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A397B2P4_9STRA1.450e-3178.95SMC_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S1UX63_9STRA7.300e-3178.95Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S1CD09_9STRA1.410e-3076.32Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..76
e-value: 9.8E-13
score: 50.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..75
NoneNo IPR availablePANTHERPTHR43977STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3coord: 1..76
NoneNo IPR availablePANTHERPTHR43977:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3coord: 1..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101936contigL-digitata_M_contig101936:691..918 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101936.1.1mRNA_L-digitata_M_contig101936.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig101936 691..918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig101936.1.1 ID=prot_L-digitata_M_contig101936.1.1|Name=mRNA_L-digitata_M_contig101936.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=76bp
DGDEVVLRRTIGLKKDEFFLNRKRVTKQEVSSLLESAGFSKSNPYYIVQQ
GKVSTLTLMKDAERLNLLKEVAGTKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase