prot_L-digitata_M_contig1019.4.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig1019.4.1
Unique Nameprot_L-digitata_M_contig1019.4.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length387
Homology
BLAST of mRNA_L-digitata_M_contig1019.4.1 vs. uniprot
Match: D7FMX2_ECTSI (Myosin heavy chain, class XI n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX2_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 2.710e-131
Identity = 209/388 (53.87%), Postives = 264/388 (68.04%), Query Frame = 0
Query:    1 VSLIPGGSANIRSALDRLSAALRTHPYSRDIEEVIYLLAIGQSALPADDQTVESANGSLQYLEYLKEGYAPAQEGPPTVTSYPCWDLIEAPVNRDAQL--LSPGGGSALSGTERGGHAGGLCVEGLPVWALQFQLGTLAFRVGESARAMAAMEGAFLSYETWLPRSSEEHTGDCPDEDGIRRAWYQGLPMWSAWVKHPRPWLDLGDIAYRQGVGSFHVAGEAYKAALQRAGDTFSPDKKQAAIMFRMVKCCSRCGDKAGAVAGLERLLYEYNFWDERYRSARSAAAALRLVRDSEDAIVQKIRTTTMRHLQGVCWRYWLIHHDFANQDKAAAKIQGLARGMKARGVVKVIVRDRQARERLEQLVENMGASCVKKRCLRRLAKQIVVNR 386
            +  + G  A+IRSAL RL+  LR HPYS+ IEEVIY LA+  +A P   Q+  +A G+L+YL+YL++ YAP++EG PT   YP WD  E  V RD++   + PG      G        GL V GLP WALQFQ+G LA R+G S R M  ME AF SYE WLPRS  +     PD D IRR+WY GLP W+AWV+HPR WLDLGDIAYRQGVG FHVA EAY+ AL+RAG+ F PD++++ I +R+ KCCSRCGD AGAV+G+E LLY +NFW ERYR+   A  A R  RD  +AIV    +  +R+ Q VCW++W  HHD    DKAAA+IQ L RG KAR VV+ I+  R++R+ LEQLVENM   C+ +R LRRL+KQ++V R
Sbjct:   50 LDFVVGDPASIRSALARLAEILRDHPYSQHIEEVIYFLAV-PAAFPQTKQSTATATGALEYLDYLRDSYAPSREGAPTAMMYPRWDAPEQEV-RDSERDGIVPGDAERWQGK-------GLQVHGLPAWALQFQIGLLASRLGNSTRGMETMENAFTSYEAWLPRSRGQFNDGAPDVDAIRRSWYNGLPHWTAWVQHPRTWLDLGDIAYRQGVGCFHVAAEAYRGALKRAGNLFPPDQQES-IAYRIAKCCSRCGDLAGAVSGIEELLYTHNFWSERYRACARAVIA-RSARDFREAIVLAHASKLIRNFQVVCWKHWKQHHDMVRLDKAAAQIQALLRGTKARAVVRFILAARKSRDLLEQLVENMHDKCIARRVLRRLSKQVMVGR 426          
BLAST of mRNA_L-digitata_M_contig1019.4.1 vs. uniprot
Match: A0A6H5KW86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW86_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 4.590e-77
Identity = 169/415 (40.72%), Postives = 215/415 (51.81%), Query Frame = 0
Query:    1 VSLIPGGSANIRSALDRLSAALRTHPYSRDIEEVIYLLAIGQSALPADDQTVESANGSLQYLEYLKEGYAPAQEGPPTVTSYPCWDLIEAPV-NRDAQLLSPGGGSALSGTERGGHAGGLCVEGLPVWALQFQLGTLAFRVGESARAMAAMEGAFLSYETWLPRSSEEHTGDC---------------------PDEDGIRRAWYQGLPMWSAWVKHPRPWLDLGDIAYRQGVGSFHVAGEAYKAALQRAGDTFSPDKKQAAIMFRMVKCCSRCGDKAGAVAGLERLLYEYNFWDERYRSARSAAAALRLVRDSEDAIVQKIRTTTMRHLQGVCWRYWLIHHDFANQDKAAAKIQGLARGMKARGVVKVIVRDRQAR-------ERLEQLVENMGASCVKKRCLRRLAKQIVVNR 386
            +  + G  A+IRS L RL+  LR HPYS+ IEEVIY LAI  +A P  +Q+  +A  +L+YL+YL++ Y P++EG PT   YP WD  E  V + +   + PG      G E       L V GLP WALQFQ+G LA R+G+S R M  ME AF SYE WLPR  + +T D                      PD D +RR+WY GLP W+AWV+HP         A R    S H+A E+                    I FR+ KCCSRCGD AGA++G+E LLY  NFW ERYR+   A  A R  RD ++AIV                         A+  K     Q L RG KAR VV+ I+  RQ+R       + LEQLVENM   C+ +R LRRL+KQ+ V R
Sbjct:   29 LDFVVGDPASIRSGLARLAEVLRDHPYSQHIEEVIYFLAI-PAAFPQTEQSTATAMRALEYLDYLRDSYTPSREGAPTAMMYPRWDTPEQEVCDSERDGMVPGDAERWQGRE-------LQVHGLPAWALQFQMGLLASRLGDSTRGMETMENAFTSYEAWLPRC-DRYTADMGSSSLRISLCAWSRVQFNDGTPDVDAVRRSWYHGLPHWTAWVQHPS--------AVRS---SRHLAQES--------------------IAFRIAKCCSRCGDLAGAISGIEELLYTRNFWSERYRACARAVIA-RSARDFQEAIV------------------------LAHASKLIRSFQALLRGTKARAVVRFILAARQSRGDQVYGTDLLEQLVENMHDKCLARRVLRRLSKQVTVGR 378          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig1019.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMX2_ECTSI2.710e-13153.87Myosin heavy chain, class XI n=1 Tax=Ectocarpus si... [more]
A0A6H5KW86_9PHAE4.590e-7740.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 325..354
score: 8.3338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig1019contigL-digitata_M_contig1019:10049..23567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig1019.4.1mRNA_L-digitata_M_contig1019.4.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig1019 10049..23567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig1019.4.1 ID=prot_L-digitata_M_contig1019.4.1|Name=mRNA_L-digitata_M_contig1019.4.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=387bp
VSLIPGGSANIRSALDRLSAALRTHPYSRDIEEVIYLLAIGQSALPADDQ
TVESANGSLQYLEYLKEGYAPAQEGPPTVTSYPCWDLIEAPVNRDAQLLS
PGGGSALSGTERGGHAGGLCVEGLPVWALQFQLGTLAFRVGESARAMAAM
EGAFLSYETWLPRSSEEHTGDCPDEDGIRRAWYQGLPMWSAWVKHPRPWL
DLGDIAYRQGVGSFHVAGEAYKAALQRAGDTFSPDKKQAAIMFRMVKCCS
RCGDKAGAVAGLERLLYEYNFWDERYRSARSAAAALRLVRDSEDAIVQKI
RTTTMRHLQGVCWRYWLIHHDFANQDKAAAKIQGLARGMKARGVVKVIVR
DRQARERLEQLVENMGASCVKKRCLRRLAKQIVVNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS