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Homology
BLAST of mRNA_L-digitata_M_contig1019.4.1 vs. uniprot
Match: D7FMX2_ECTSI (Myosin heavy chain, class XI n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX2_ECTSI) HSP 1 Score: 405 bits (1041), Expect = 2.710e-131 Identity = 209/388 (53.87%), Postives = 264/388 (68.04%), Query Frame = 1
Query: 1 VSLIPGGSANIRSALDRLSAALRTHPYSRDIEEVIYLLAIGQSALPADDQTVESANGSLQYLEYLKEGYAPAQEGPPTVTSYPCWDLIEAPVNRDAQL--LSPGGGSALSGTERGGHAGGLCVEGLPVWALQFQLGTLAFRVGESARAMAAMEGAFLSYETWLPRSSEEHTGDCPDEDGIRRAWYQGLPMWSAWVKHPRPWLDLGDIAYRQGVGSFHVAGEAYKAALQRAGDTFSPDKKQAAIMFRMVKCCSRCGDKAGAVAGLERLLYEYNFWDERYRSARSAAAALRLVRDSEDAIVQKIRTTTMRHLQGVCWRYWLIHHDFANQDKAAAKIQGLARGMKARGVVKVIVRDRQARERLEQLVENMGASCVKKRCLRRLAKQIVVNR 1158
+ + G A+IRSAL RL+ LR HPYS+ IEEVIY LA+ +A P Q+ +A G+L+YL+YL++ YAP++EG PT YP WD E V RD++ + PG G GL V GLP WALQFQ+G LA R+G S R M ME AF SYE WLPRS + PD D IRR+WY GLP W+AWV+HPR WLDLGDIAYRQGVG FHVA EAY+ AL+RAG+ F PD++++ I +R+ KCCSRCGD AGAV+G+E LLY +NFW ERYR+ A A R RD +AIV + +R+ Q VCW++W HHD DKAAA+IQ L RG KAR VV+ I+ R++R+ LEQLVENM C+ +R LRRL+KQ++V R
Sbjct: 50 LDFVVGDPASIRSALARLAEILRDHPYSQHIEEVIYFLAV-PAAFPQTKQSTATATGALEYLDYLRDSYAPSREGAPTAMMYPRWDAPEQEV-RDSERDGIVPGDAERWQGK-------GLQVHGLPAWALQFQIGLLASRLGNSTRGMETMENAFTSYEAWLPRSRGQFNDGAPDVDAIRRSWYNGLPHWTAWVQHPRTWLDLGDIAYRQGVGCFHVAAEAYRGALKRAGNLFPPDQQES-IAYRIAKCCSRCGDLAGAVSGIEELLYTHNFWSERYRACARAVIA-RSARDFREAIVLAHASKLIRNFQVVCWKHWKQHHDMVRLDKAAAQIQALLRGTKARAVVRFILAARKSRDLLEQLVENMHDKCIARRVLRRLSKQVMVGR 426
BLAST of mRNA_L-digitata_M_contig1019.4.1 vs. uniprot
Match: A0A6H5KW86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW86_9PHAE) HSP 1 Score: 262 bits (670), Expect = 4.590e-77 Identity = 169/415 (40.72%), Postives = 215/415 (51.81%), Query Frame = 1
Query: 1 VSLIPGGSANIRSALDRLSAALRTHPYSRDIEEVIYLLAIGQSALPADDQTVESANGSLQYLEYLKEGYAPAQEGPPTVTSYPCWDLIEAPV-NRDAQLLSPGGGSALSGTERGGHAGGLCVEGLPVWALQFQLGTLAFRVGESARAMAAMEGAFLSYETWLPRSSEEHTGDC---------------------PDEDGIRRAWYQGLPMWSAWVKHPRPWLDLGDIAYRQGVGSFHVAGEAYKAALQRAGDTFSPDKKQAAIMFRMVKCCSRCGDKAGAVAGLERLLYEYNFWDERYRSARSAAAALRLVRDSEDAIVQKIRTTTMRHLQGVCWRYWLIHHDFANQDKAAAKIQGLARGMKARGVVKVIVRDRQAR-------ERLEQLVENMGASCVKKRCLRRLAKQIVVNR 1158
+ + G A+IRS L RL+ LR HPYS+ IEEVIY LAI +A P +Q+ +A +L+YL+YL++ Y P++EG PT YP WD E V + + + PG G E L V GLP WALQFQ+G LA R+G+S R M ME AF SYE WLPR + +T D PD D +RR+WY GLP W+AWV+HP A R S H+A E+ I FR+ KCCSRCGD AGA++G+E LLY NFW ERYR+ A A R RD ++AIV A+ K Q L RG KAR VV+ I+ RQ+R + LEQLVENM C+ +R LRRL+KQ+ V R
Sbjct: 29 LDFVVGDPASIRSGLARLAEVLRDHPYSQHIEEVIYFLAI-PAAFPQTEQSTATAMRALEYLDYLRDSYTPSREGAPTAMMYPRWDTPEQEVCDSERDGMVPGDAERWQGRE-------LQVHGLPAWALQFQMGLLASRLGDSTRGMETMENAFTSYEAWLPRC-DRYTADMGSSSLRISLCAWSRVQFNDGTPDVDAVRRSWYHGLPHWTAWVQHPS--------AVRS---SRHLAQES--------------------IAFRIAKCCSRCGDLAGAISGIEELLYTRNFWSERYRACARAVIA-RSARDFQEAIV------------------------LAHASKLIRSFQALLRGTKARAVVRFILAARQSRGDQVYGTDLLEQLVENMHDKCLARRVLRRLSKQVTVGR 378
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 1161 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Cds size | 1161 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682406624.1346254-CDS-L-digitata_M_contig1019:10048..10536 | 1682406624.1346254-CDS-L-digitata_M_contig1019:10048..10536 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1019 10049..10536 + |
| 1682406624.1425793-CDS-L-digitata_M_contig1019:12290..12392 | 1682406624.1425793-CDS-L-digitata_M_contig1019:12290..12392 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1019 12291..12392 + |
| 1682406624.1500924-CDS-L-digitata_M_contig1019:13408..13529 | 1682406624.1500924-CDS-L-digitata_M_contig1019:13408..13529 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1019 13409..13529 + |
| 1682406624.1574566-CDS-L-digitata_M_contig1019:15351..15474 | 1682406624.1574566-CDS-L-digitata_M_contig1019:15351..15474 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1019 15352..15474 + |
| 1682406624.1646411-CDS-L-digitata_M_contig1019:19786..19879 | 1682406624.1646411-CDS-L-digitata_M_contig1019:19786..19879 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1019 19787..19879 + |
| 1682406624.1756682-CDS-L-digitata_M_contig1019:21054..21126 | 1682406624.1756682-CDS-L-digitata_M_contig1019:21054..21126 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1019 21055..21126 + |
| 1682406624.1833413-CDS-L-digitata_M_contig1019:22902..22969 | 1682406624.1833413-CDS-L-digitata_M_contig1019:22902..22969 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1019 22903..22969 + |
| 1682406624.1909719-CDS-L-digitata_M_contig1019:23472..23567 | 1682406624.1909719-CDS-L-digitata_M_contig1019:23472..23567 | Laminaria digitata LdigPH10_18mv male | CDS | L-digitata_M_contig1019 23473..23567 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig1019.4.1 >prot_L-digitata_M_contig1019.4.1 ID=prot_L-digitata_M_contig1019.4.1|Name=mRNA_L-digitata_M_contig1019.4.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=387bp
VSLIPGGSANIRSALDRLSAALRTHPYSRDIEEVIYLLAIGQSALPADDQ
TVESANGSLQYLEYLKEGYAPAQEGPPTVTSYPCWDLIEAPVNRDAQLLS
PGGGSALSGTERGGHAGGLCVEGLPVWALQFQLGTLAFRVGESARAMAAM
EGAFLSYETWLPRSSEEHTGDCPDEDGIRRAWYQGLPMWSAWVKHPRPWL
DLGDIAYRQGVGSFHVAGEAYKAALQRAGDTFSPDKKQAAIMFRMVKCCS
RCGDKAGAVAGLERLLYEYNFWDERYRSARSAAAALRLVRDSEDAIVQKI
RTTTMRHLQGVCWRYWLIHHDFANQDKAAAKIQGLARGMKARGVVKVIVR
DRQARERLEQLVENMGASCVKKRCLRRLAKQIVVNR* back to topmRNA from alignment at L-digitata_M_contig1019:10049..23567+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-digitata_M_contig1019.4.1 ID=mRNA_L-digitata_M_contig1019.4.1|Name=mRNA_L-digitata_M_contig1019.4.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=13519bp|location=Sequence derived from alignment at L-digitata_M_contig1019:10049..23567+ (Laminaria digitata LdigPH10_18mv male)
GTCTCGCTTATTCCAGGTGGCTCCGCTAACATCCGATCAGCACTAGACCG
GCTTTCGGCAGCACTACGAACGCACCCCTACAGCCGCGACATCGAAGAGG
TTATTTACCTTTTGGCGATTGGACAGTCCGCGTTACCGGCGGACGATCAA
ACCGTTGAAAGCGCCAACGGATCTCTCCAATACCTAGAATATCTCAAAGA
AGGCTATGCCCCAGCTCAAGAAGGGCCACCCACGGTAACATCGTACCCAT
GTTGGGACTTGATCGAGGCACCTGTTAATAGAGACGCCCAGTTGCTATCA
CCGGGGGGGGGTAGTGCGTTGTCGGGGACTGAGAGAGGAGGGCATGCCGG
TGGGCTGTGTGTGGAGGGACTCCCCGTGTGGGCTCTACAGTTTCAGCTCG
GTACGCTAGCCTTCCGCGTGGGTGAATCCGCTCGAGCTATGGCGGCGATG
GAGGGCGCCTTCCTGTCGTACGAGACGTGGCTACCCAGGTGCTGTGCTGA
TTATATAGCACTACAGTGTAGGCCCGATAAGAACAAAAGGCTCACTTTTT
GCAAGGATGCTAAGAAAAATGGCTTAAGAAAAAGTGCTCGGCGGCGAGCG
CTGCACTAAATCCTACCAGGAATACAATAGCCTATGCTCAAGGTCGTTCA
AGGACAGGTATACAATAGCCTATGCTCAAGGTCGCTCAAGGACAGGTATA
CAATAGCCTATCTATGCTCAAGGTTGTTGAAGGATGGTGTCACAATAAGA
ATCTGCCTTCTAAGGCTTGCTCAGATTAGTAGCTTTTTGTTGTTGGCGGA
CCCATGCTGTGTTGTACAATACACTAGACTAGCGCTTGCTGACTGAGTGG
TCTAGTGGGTTAGTTTAGTGCTACGTAATCCACAGAAGATATGTTTTCGA
GTTCGTCGATTCTCGCAGGCTTTGCAACAGTGAACTCCGGGGCCCTCCCC
TCGCCAAACGCTACTACTGCAGTCAGCGCTGACTGAGTGGTCTAGTGGGT
AGTGCTATATGAACATGCTGGGACTATGCCTTCGGTTGTATACCAGTCAT
GTGTAACACCTCGAGTGCACTTTGCGCGTTAGGCAAGATTCGGAGTGCAT
AATACACTCCGGGATTTTTTTGCTGTCATCTCGCGTAATTTTTCACGGAA
GGCATGACGTGCTCATGTTGAAGCACCCCCTACCCGCAGCAACGGCGCTC
TGCACGAACGATCGTTAACCTGGTCACGCGCAGACCAGGTCTACAGGGGC
CCAGAAGATTAGCGAGCCCTTTAAAGAAGTACCCTGGTTCTCGTGAAAAC
GCCTTTCCTTTTCGTTTCACGGGTGCTACGGTAGAGGGTTAGAAACACCT
TGGATTTTATGAGGTTCCGCTTTACTGTACCTCACCCACAAACTGGCGTT
GACCAAATAAATGTTGGTGTTGATGTTGATGTTGATGTTGATGGAGGAGG
ATCTCATAGCATAGGTATACAACGAACAATGTTGCAAAAAAACATTGTTG
GGGGTTCCAACCAAAATAGGCGGCGGCTCCTGAGCTGACGAGCCTCGTCA
CTCAGTGTTAAAAAATACCGTAGGCATCATCAACCTGTTGTCGTGATAAA
TGTTCAGTAGCGACTGCAGTACAGCAGTCTATCCCGTCCATGCTCAGCAG
CGTAGAGTACTGCTGAAGACGTACAGGCATAGCAGTCAGCGTTGTGCTCG
TTTTTTTTAATTTAATTTATGGCTCTGAAAGCGGCCTTTTCAACATGAAT
CTTCTTCTATCTTTTCCGAGGTGCCCGCTAGGTAGTTTGACCACTACCTG
CGCAAGCCTGTGCTACCACCTGCCAAGGGTGTTCTAACACTCAGAATTGT
TTTTGGCCCTATCGTATGTTTTTGGCCACAACGCGTCCGCTACCCAACGG
TCGAGGGCAAGGTCAGCACCGTTGAATAAAAAAAGTCCGTCAACCGATTC
CCCTCGTCGTTTATGTTATCGTCACTTGATTTCACACCTCGGACGGATCA
CCGATTCCTATTTCATGATCTAGATCTTTCAGGGCAGATGTATTCCTGAT
CTGCAGGATCTAGCTCGTGTTGCCAGGTGGGAGCCGTACAACCTGCATGG
TCTCGGACAGGTTTGCTGGGTTAGACCTGTACTTATACAGATCCTGCACA
ACAGCCCATGACGGCAGATTAGGATCTAGATTATCTAGATCGTGATCTGT
TCGACGTGTTCTTGATTTGCACATGCGCACGCGATTATGCAGATCTTCCG
AGGAACACACTGGTGACTGTCCTGACGAAGATGGTATCCGGAGGGCGTGG
TACCAGGGACTGCCGATGTGGTCGGCGTGGGTGAAGCACCCCAGGTAAAC
TCTGTCGTCTAAAAACCTTGTATATACCTTGAAGTGCTGAAGGCGCTCTA
GGACTTAACCCGTTCATAGTTATTTTTTTCCATCCCACTTATTGTCTTCG
CCCTTCTTTTCTCGCTCCCTCCTGCTGTAGTAGTAACTCAGATCTGGGGT
CGCAAAGCAGGCTCTTCTCCTCCCTCCCCACTAATACGGTACTCGCCTTC
ACTTTTATCGCGTGAATAGTTCACTGCTGCAAAAGGATTCCCACACTAAG
CCCAAGTAGTTTGCCCCCCAACAACGTCGGTCGACTTCTCAAGTGGTTAA
CCCCTTTAGGACTGCATTCCCGTTTTGGGGACACTTTGGCTCTAATTCCA
AGTAATTTGTCCCCAAAACGGGAGTGCGGTCCTACCAAAGGGGTTAACGC
GATATTGATGTCCAAATCGCCCGTGTGTTTCTGGTTGGCTGCAAGTGATG
TGTACATTAGAGAGTTGAATTGAAGATCTGATTCATGGCCGGGTACCGAC
TCGAGTAGCGCGTTTGGACGTATTATTTGTCCACTACAGTATTTGATATC
AAGGACCCATCTGAACGAGGAACAAAAAAAAAAGCCAAGACACAAAAAAA
AAAAAAACTTTTTATGTTTTCGGGAAAATAGAGGACCGAGTACAAACGCA
GGGAACGCGTCTGAGAGGAAATAAAGTACTAGACTAGCCACATTCCATTT
TTCCTGGTAGATGTTTTCGTGTGAACGCTTGATCCCTATTAATAGCCTAA
TCCACTTCAGTCTGCTTGAGGCAGCACGTGTTTTTGTCGGCAAAATGATT
GCACGCGCGACTGGTTCGAAACAGAGCGTGCCTACATACGTACATTGCTG
TACCTCTGTGATCCTATCCTGGCATGTGCACGTTCCATCACCAATGGGCA
AAAAGGCCGTGGCTAGACCTTGACCAGATAATGACTTACGTATCATACAT
TGCTGTACCACTGTGATCCTATCCTGGCATGTGCACGTTCCATCACCAAT
GGGCAAAAAGGCCGTGGCTAGACCTTGGAGACATCGCATACCGCCAGGGT
GTGGGAAGTTTCCACGTCGCTGGCGAGGCGTACAAAGCAGCTCTGCAGAG
AGCAGGAGATACCTTTTCTCCTGACAAGAAGGTACGGCAACGACTACCGT
ATATATAACACGCAAGTTAGCGCTCCCCCTCGGACGAATGTCTAAGCTGC
AAGCTGATTTGCTCGAAAACGGAGAGGGTGCAAACGCCGAGCGATGCGTC
TATGGATTTATTTATTTATTTTTGTCGTCCGGCGCAAGGGTAAAAATAAG
GCTTAAGCCCGCCACACTTCCACGTCAAATACCGTGCCGTGTGTGTCGAT
TCACTCTGTGCTCCCTAGGCAAAAGTAGCTCCTGCTGCTGCTTCTTCGGC
CGCGTGAGTATGTCGACCTCTATGGAATGGAATGATCTCGACGAGGTCTT
CCCAACGCCGCCGTTTTCGTTGTGTGTGCCCGTGTGCCTCCCTACTACTA
CTACTGTAGTTTTGGAGAAAATCGTCCCAAGGGGGTGGGTTTCTTGCGTG
GTGTACGGTACATGCCCTAAATCCTACAGTACTTGGTCCCATGGTAATGA
ATACCCCGTTAGTGTGCATCAAAAGCCACCTTGAGAACAGCTGGAGGAGG
AGTTACTCCTGCAATCCAAAGGTGACTTGTAGTGGTACTGTACCAGTACA
GTATAGGACGACGAGTAAGAAAGTGCCTTCGTAATACGAACGATAGGCTC
GCTTTTTTTGGAGGAGGCTAAGAAAAATGGACTAAGAAAAACGGCTTAGC
AGTGAGCGCTACAACTAAATGCTATGTGATTAAAGGATAGCCTATATGCT
CAAGGTTTGTTTGAAGGGTGGTGTCGCAATAAGGCTAACCCCTTTAGGGC
TGCAATGCCGTTTGGGGAACTTTTGACTTGAAATTAGTATAGGATACGTG
TTTATGTAGAGTGCTACAGTAGTGCACTGCTAATAAAAGGGTTAAAGCGC
ACAGCGCACAGAGAACAAGGGCCAGCGGTTTCACCCTCAACCTACAGCGC
GTGCTGCAACTTGGCCGTTTGTTGCTGGATACTTCGATCGCCTCCATCAG
AAAAGAGACACCAGTAGAGCTGTGAGTTGGATGACTAAAAGTCGCCAGCT
AGGTAATAGTTGGCTAGGTATTATAGTTAGTTGCAGCGGTGCCAACTATC
CGACTATTTGATTAACTTGTGTAAGGGATTGCTCAGTAGGTGTAATCATA
CCATTTGTGTGTAGAATGAAGCCAAAGTGCGCCAGCCAACTAGTCAACTA
CCAGGTAAGTCAGTTAGTTGGTTGACTTTGCGCCAGCCAACTAATAACTG
GCCGGGAAGCCCAGCCAACTCACAACCCTAGATACCAGGTAGTAAATATC
GAGAAAATTTGAATACTCGGAGGAGTAAAAATCGAAAAGATAAAAAACAG
TACCTGGTATGTACTCAACCCCCCCCCCCCCCCCCCCCCCCCCCCCAACC
CCGGCANNNNNNNNNNAACGGAAAAAATTTTAATCCCCGAAGGAGAAAAA
ATCGAAAAATAAAAAACCAGTACTGGGTTGGTACTCACCCCCCCCCCCCC
CTCCCCGCCTACCTGATCGGGGAAACCTGGCGTGCTCCGTCCCGGCATCG
TAGAGATGCGAGAATCTATGGTCACACTTTGACTTGGTTCAAATATATCC
TAAACAGGCAGCCATATTGTCCGCATGGCCAAGTGCCTCCATCAGTGAAG
AGATGGCAATAGCTCAAAGGTTCGAATACACGGAGGATGATGGACTTGGT
GCAAATGTATTATGAAGAGGCATCCATCATGTAGTTCCGCATGGCAAAGT
GCTGCAATCACTGACCTCTGACCAAGATATCCTAAGCAGGCAGCCATCAT
GGTTCGCATGGCGAAATGCTTCAATCACTGACCTCTGACAAGCATGTCCT
GAGCAGGCAGCCATCATGTTTCGCATGGTGAAGTGCTGCAGTCGGTGCGG
GGACAAAGCCGGTGCTGTCGCCGGCCTCGAACGCCTGCTCTACGAGTACA
ACTTCTGGGACGAGAGATACAGGTCTGTCGGTCTTAGTCTATTTTTGCCA
CGAACCTTGTTCGACCTTAGGTACCAGAGTCTTATTTTATTTTTGCTACG
AACCTTGTTCGACCTTAGATATCAGAGTAGAGGCAATACAATTTAATTGG
AGGGGGGGGGGGGGGGGGGGGAAAAATTAAATTTTTTTTTAGTCAAGTTA
AAAAAAAGAGATAAATAAAAAATCCTTTGTAACAAATTATTAGTAAAGAT
ANNNNNNNNNNTTTAAAGGAATTGTAGGGGTGTGTGTGTGACAAGTATTG
TATTAAATTAATTAATTATTGACTTGAGTTAATAATAGTGTGAATTAAAC
AATACCATGGTACATATTATTTAGGAGGCAATATCGAGGACGAACAGGTA
TGCTTGCTTCGACCCACACAGTAACACTACAGCATGGGCCTATCAACAAG
AAACGCCTACCTAATCTAATCTAAGCAAGCCTTATTAGAACTTAGAACCT
CATTGTGACACAATCCTTGAACAACCTTGAGCATAGTAGGCTATTATAGA
CGGAGTACCCTGGTAGGATTTAGTGCCGCGCTCGCCGCTAGGCACTTTTT
CTCGGTTCAATTTTCTTAGCGTCCCCCGAAAAGTGAGCTGTTTTCTCTGT
ATCACGCTCTTTGTTATTTGTGGGCCTACCAGTATACTGTAAGGCATCTT
CCAATACCGCATCGGCACCTACAGTATCAGCAACGGTAAGCCGACTAGTT
CACGTGCCCGCGGCAGGCGGCTGACCTCGATATTTCCCTCGCCAAAAGTT
TTTTTATACTCGATGTGGGTCGCTAATCCTGTCCAGACGAGGACGAAGAA
AAAGCTGCCACCTATCCCGAGCACTATCGGCACCTATCCCGAGCACTATC
GGCACCATTCCCGAGCACTATCGGCACCTATCACAAGCACTCTCGGCACC
TATAACAAGCACTATCGGCACCTATAACAAGCACTATCGTAGCGAGGGGC
CAGACAATCCATTGATGGCACAACTTCTCGCGTACCCGATACCTCTTCCG
ATTGAGAAAACCCTTTCCTTCACACGTCGGACAGATCACGATCTAGATCA
CGATCTAGATCACGATCTAGATCATCTAGATCATCTAGATCCTGACCTGC
CACGATGAGATAATATCCAGGATCTGTGTAGTACAGATCCAACCCACAAA
ACATGTCCTAGATCATGCATATTTTACGGCTCCCACCCGGCAACATGAGC
TAGATCATACAGATCAGGAAATGTATCTGGCCTGAAAGATCTAGATAATC
AAGTAGGAATCGATGATCTGTCCGAGATGTGAAAACCTTCAAAAGCATGG
CACAGGTGGGACCCGGCAACGTTCCCGTGACTTGATGATTGCTTCTGGGT
ACAGTTTTTGTTTTGCTTTGTTTTTCTCGGACCAACTACTCGTACATCTA
GCTGCTTTTAGCGCGGATAGTCTCCAGAAATTAGCATATTTTGCATTATG
GGGCTTGGATTTTGCATTGTAAGAGACAAAAAAAAGACCGAACCGGTCTT
GAAATTCGTAGTCGCACTGTTTTGCGAGCGTACCGCAGGAACCACCTCGA
GTCGTGGTCTGAGCCCTGGCGGAGCCATTTCAAGCGAGAGGATTCCGCTT
CTAGAAGGCTCCAGCGGTTCTGGCGAGTAGCATCTGCGAAGATGCGGTTA
CGAGCCCTTGAAGGGCAAGACAGGGTGAGTGGAGAAGCGAGGAAGAGCAA
GCGGTCACATACAGTACAGGACACCTAATAAGAAACAGGAAAGCTGGTCC
AGGCTGGATTTCTTATTTTTATTTGAGAATGGGTACGTTCTACTTTAATT
TCAGTATAACGACTCCCGAAATTATTATTTTGCTGTAAATCTCAGCCTGC
TTTTCTTATTGCTCGTTTTCTTATTTTTAATGGCTGTCCTGTGCTGTATT
TCGTGCTCGGTTCGGACCGAGACGTATCCGCACGCAAGTGGGGGGGGGGG
TGTTTAATGTTAAGCAACGCTTTGTATCAGGTACATGTTTGTTTTACCCT
TGAGAGAGTTGCATTCAGTGCAGAACCGAGCACTCCTGTAGAGCAGCGTT
GATCACTCCTAGGCATTCCCAGAAAAATAAATCAAAAAGAAGATTATTTA
CTGCTGCTTCTGCTATTACTGTCATTGTGATTATTGTATGTGTGCCATCT
GACAATGTGCAGCATGTGCTTCGTTGTCGATCACTCGTGTACACTTCCAG
GAAAAAGAAGAAAAAGTTCTCGTTTCAACTGCATCTATGTAAACTAGGAC
CGGTCTATTTATCTAAAATAGGACCGGTCTACGCCCTGGCGCGCTTCCCT
GAGGCTGCCTTCCTGTCAAGATGCAGTGAGACATGACGCTTTTTCGCGCC
CCCCCCCCCATAGCCCGGATGCAAGGAACTTTGACTCTGCTTGTTTCACG
GCCACACCAGCATCGTCCCGGTTGCAAGGAACCTTGACACCGTTTTTTTT
TATTGACCGCCATTACAATTAGTGATCTTGATCCTGACGTGCCGATGGTT
GTGCGCTCGGTCGCTAGTACACGAACTCAAACCTCTTACTCGTACCACCA
GGTAAGTGCAGCCCGTTAGAATTACACCATTTCTTGCCTGCAAGTGTGTA
CCATGACATTTCAGGCGTGTACCACCGAAAAATTCCGTCAAACAAGAAAA
ATGACCGGGAAGGCCGATGGGAGGATTCAGCCCCCAGCGTGTGCTTCTGT
TAGAGGTGCACCATAGACTAACCACTGAGCTATTATAGCATTACAATTTG
AGATAGCAGTCAGCACTGACTATTGGTGTGTATTAAATAACAGCGCAATC
TGCGGTCCGTCTGCTGTTAAGCCTAGACCTCAGATTGACCGAAGGGTTGC
AATCCCTTGAGCTGACTGTTAGCTCAGTGGTTGTGGTGTGTGCTTAATAA
CAGCACAATCTCGGGTCCGTCTGACTGTTAAGCCTGGACCTCACCTTGAC
CCAAGGGTTGCAATCTCTTGGTTGCAATCACCTTCAGTAGACGCTGACTG
CCAGCTCAGTGGTTGTGGTGTATCTCTAACAAAACCCGTCTATAACTTGT
TTTGATTTCCATTGGTTTCGTTCTTCTCCTTCTTTCTAGGAATGTTTAAG
CGTAATCAACGTTGAAGCCCATGCTATACGATGTCGGATGGCAAACACAT
TAACAACACTATTAGTAATATAATCGCCTTAGTTTTGTTTTGCCGCGTAG
TTGGTGAAGGAGTTTGTGGAGTGGAAGAGGCGGATCCTCCTGCAGCATAC
CTTCCGCAGCATCATGCACTACTGCAGGGAGAGCAATCAAATATCGACGT
CGGCGACTGTTATACAGGTGGGTGCGATCAATACGTGGGGGCGGAACATT
GACGAGGAGTAGGGTAGAACGAATATCTGGCAAGGGAGGAAGTTGTAAGG
TGGAGAGTTGAGGAAGGAAAACAGGGATATTTGTTGTCTCAAAGTGATAG
AAGTAGACAGAAGGTAGTTAGACTTTGTGCATAGGTTTCCTTTGTTTCCG
TGGTTTTCTTCTTTCGGGAATGTTNNNNNNNNNNTTTTCCGGCACTGTGT
TGAGCGGTTCACGTTGAAGCTCATGCTGCACGTTGTCGGATGGCAAGCGT
AGTAATAATAGAACAGAGGCTACGTGGTACTACAGGATATTCGATTTATG
CCGGACTGAATCGTGTACGAATACATTGTCGGGGGCCAAAATTAATAATA
ATAATAATAGTTGCCGTGATTTCTGCGTCTCTTGCTTGAACCCTAAACGC
CCCTGAGTTCCACGTTACGCGGGAACTATACTATTGTTGTCAGTTCATAT
TCGTGATGATGTTGCTGATGATGGTGATTACGACGATGCTGATGATGATG
ATGATGATGATGATGATGATGACGATGTTCTCACATCAGTTCATTCCCTG
AAATCCAGCCCGTGGTCGCAAAACCTTAGCAACCATTGACTGTGAGTCAA
AGGACGAGTCTATAGTCTAGAGCAAGAGCTACAAAACCTTATCGCGCACT
CTCGTTAAAATAATTATAATTTGCGTGATTTTGGGCGTGTAGCTATGGAG
CTGTGGATGATCAGACAAAACCGGCAGAGACAAAATTGGATAACCTGTAT
TCGTTGACGGCTAGTTCAGTTGTTGTGGCGTACCTGGTGTATCTACCAAG
TGTGGCTTGCTCGTCTCTGTTTTACTGATCCTTCTTCGAGCACAGAACTG
GGATGTGCCAACAAATTTATGATTTTGTCCTCGCTCTATCTCTCCCTCCC
CCGCTTACGGTGTGCAGTGCATGTATCGACTCTCCAAGGCTCGCAGTGCT
GCAGCAGCGTTGCGCCTTGTCAGGGACAGCGAAGACGCCATTGTGCAAAA
AATTAGGACCACAACCATGCGGCACCTTCAGGTAAACACAACGCGTTGGA
GGGTTTCAGGGAAATACATAAAAATATACACTTCGTATACATATATATGT
AGGGGGGGAGGATGAAATTAATTAAATGTTGACTTGAGTTAGTGTGAATT
AATTAATTAATACTTTTTAGGAGACGATAGGTCTCAACAAGCCAGACCAC
CGCCTTTTCTAGTGGAGTGGTTGTGCTAACGATCAGCGACTCGGTACCCT
TAGTAGAATCTGCCTCTTAAAACATAACCATAGGGTCCCTGGGGCTGCTG
GGTAGCATGGTAGCTGTCCTAAATAGCATCTGCCTCCTAGAATCATAACT
ACTATGCGTACGGAAAGACACTTTACGTTTAGGCGTGTGAGCTTTGAACT
GAGCATGATCACCTCGCTTGGCGAACAGATCGAGCATGATAAGCAACACA
ACCTAATACTACGGTGAGGGGTGGATGGAATTGACTTGAGTTAGTGTGAA
TTATTAAAAAAAGTATACCAGGTATAGGAGACGATATCCAATCTCCCTCC
GAATATGAAATGCTAGCCAGATACGTATAGACATTCTTTGATGTGGGGCG
AAGGAGCGACCAAGACAGTACAGGTGCTCCACGTGTCGCGCAAAGAAAAA
CATTGGGGCACTCCATCGCTCCCCTCCCCCCTTTTACCCTGTATCCTTAA
AGCGAAACATTTTGGTCCACTCACCATACGCATATCACGCTATACAGCCC
CCTTGTAACTACATGACGAGTAGCACCTCGAAGCGATACACCTTTTAGCC
TTTTAGACGAACGCTACGGTAAGGGTTCACCTTCACCTGCAAATTCCTGA
AGCATTTCGCCTGAAAAAGCTCTATATATCGCCCAGTAACGCCTTTCACA
ACACTTGGACGCTCGAAAGCGATCAACACCCCGATGGCCTATGATAGGTC
CACAACGAACGCTATCTCAAAAAAAAAAAAACGATATTGGGTAGATTGAG
AGTTCCTCGTTTGAGAAGCCCCATCAGTCACAGAAAAAAAAAGTCTAAAA
AGTGCTATGTATAAGGCATGCTGTAAGGCATGCCCTATTGCTATAAGGCA
TGACCTATCGTACCACGGGTCTTTGGCTGAACCCCCCGACCTCAACCACT
TTCCACTCGCACGCTGTGTCTGCTATTATTGCGCATTGTGGCAAAAATGT
GACCAGGGCGTATGCTGGCGGTACTGGCTTATTCACCACGACTTCGCAAA
TCAAGACAAGGCGGCCGCAAAAATACAGGTACACTGGGTCATGCTCGCAG
ATGCCAAGTCCTACATTTTGGGTTGCCTTACAGTACGTGGCCCCGTTTAA
GGGATCTTAGTTCGTTCGGGATTGAAGGGCCCTTATGTGGCAACGTCCGT
TATCAGGGTTGGTATCTGTCCTTTATAGTCCATAGTGGGCAAAAACGGTG
CGCAGAAATTCGAGGTCCCTTGTACTAAGAGTATAGTAGTGGTCCCTCTA
TAGTGCCGGTATGCGCCAGCCAACAATACCGGCATTATTGCGGCAGCCGG
CACTACTCCGCCCACCGCCACACTGGTTAATCCCATCTGTGCCAAGATAT
CACCCACGCACTATAGCGGCAACCGGCACTATATACTCAACCGGCACTAT
AGAGGGACCACTACTGCTGTATACCGTTTTCCCTTGCCGCGGGGTCTCTT
ACAAGGGGCTACCTGCCGTACTTTTTGTTCCGGTGGGGCGTTAACCCTTT
CGCTGCTGTAAACATAGGCTAATCCCACACTAATTGCAAGTAATTCCCCC
CCCCCACACTAATTGCAAGTAAAGTTCCAAAGGGGTCAAGGGTTGGCACG
CACCGGCATCCAACTCGAGCACGTCGCTCTGGAAGCACTCCTAACGAACA
GAGGTTTGTTCGTGACTTTTTGGCAGCATGTATTGTTAGGGAGTAGGGTA
AAACGAGGGTCTGCCAAGGGAGGAAGTTGCAAGGTGGAGAGAGTCCAGGA
AGGGAAAGAGGAGTATTTGTTGTCTCAGAGGGATAGAAGAGCGACTGCTG
TGGTACTAGAGGATATTCGATTTTATGTCGGACTGAATCATGTACGATAC
ATTGTCGGAGGGCAAAATAAATAACAATCATTTAGGAGGCTCGCTACGCG
TCATAGCCGCGACAAGATCGGACGGTGACCTTTGTTCGTCGCTGGCAGCA
AAATGGTGCACACCTCAGACAGATAATCTATTCCTACTTCACCATCTAGA
TCTTTCAGGGGAGGTCTATCCCCGATCTTGTATGATCTAGCTCATGTTGC
CGGGTGGGAGCCGTACAATCTGCATGATCTAGCACAACCTTCCATATTTT
GATCTGTACTATACAGATCCTGCACAGCATCTCATAACGGCAGGTTAGGA
TCTAGATGATCTAGATGATCTAGATCGTGATCTGTCCGAGGTGTGAAATG
ATGGACCTATATCTAGCAAGCCTAAGCGGCAACCGCTCTCTGCAAGCTAG
CAATTTCCCACCTCGATAACCTGCTGGCACAGACGATACACGAAATTCAA
GCACCCAACCGGCGTGTTGTTGTTCACACAACCTTGACCTTTACTGATGT
CGCACTGTAGTAGTCGAGAAACGGCTCTAATAACAGGCCTAGGTGTCGCG
ACAATTTTTATGAAGTTGTTGGGAATTCGACTGGATAGTTGAACAGCAAC
TTACTTGACGTTATGTCCCGTCCATCGCGGGGTCGTATTACAGATAGCTA
TATACATTGCTGCACAAGGTCAAATGTTTAAGTTTTCCTTCTGAGGACCT
CGCAGACAACAGAACAGAAAGCCTAACAGCCCAAGGTGTCGCGACAAAAC
TTTTGTTAAGGTGTTGGGTAATTCCATTTGATAGTTGAACAGCAACTTAC
TTGACTTTATGTCCCGTCCATCGCGGGGTCGTATTCAAGATAGCTATATA
CGTTGCTACGCAAGGTCAAACGTGTGAGTTTTTCCTCTGAGGACCTTGCA
GACAACAGATTAGAAGGCCAACCCGCCCTCACCCCTCTCTCGGGCGAAAC
ACAGGGGTTAGCGCGAGGCATGAAGGCCCGGGGCGTGGTTAAAGTGATCG
TTAGGGATCGACAAGCACGAGGTGTGATTCGGCCCGGAATGTAAAAGAAA
ATGCGTAGAATGTATCGGAGCGTGCTGTTTCAGACGTGCGCAGAGTCGCT
CCACCTCGAGAACGCGTACATGATTCCGTCGCAGCGGGCAGCCAGGGAGG
AAATCTTGGCACGCTATTTAATTTTGTTTCCGTGGTTTTCTTCTTCTTTC
GGGAATGTCATGAGTGATCAACGTTGAAGTTCATCCTGCACATTGTCGGA
TGGCAAGCACTGTAATAAGAACGTGCCAAAACAATCTCAACTGTGCTACA
GTAGTTCGTCCCTCCCCACTAGAACTTCTTATGTTTCCACTGACGCATTG
ACGCATCGCCGTCATCACATACCGGTCCGAGCAGAACGTCTAGAGCAACG
CGTGGATTGTATGGGGGGTTTCTTACGTGAAGAAGCGTAACCCTAACCCT
AAGCCTAAGCCTAACCCTTGAGATGATTGCACTCCCACTGTTGCATCGCC
GAAATAACATGCCGGTACGCGCAGAACGTCTAGAGCAGCTTGTGGAAAAT
ATGGGTGCTTCTTGCGTCAAGAAACGCTGTCTGCGGAGGCTTGCAAAACA
GATCGTTGTTAACAGGTGA back to topCoding sequence (CDS) from alignment at L-digitata_M_contig1019:10049..23567+ >mRNA_L-digitata_M_contig1019.4.1 ID=mRNA_L-digitata_M_contig1019.4.1|Name=mRNA_L-digitata_M_contig1019.4.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1161bp|location=Sequence derived from alignment at L-digitata_M_contig1019:10049..23567+ (Laminaria digitata LdigPH10_18mv male)
GTCTCGCTTATTCCAGGTGGCTCCGCTAACATCCGATCAGCACTAGACCG
GCTTTCGGCAGCACTACGAACGCACCCCTACAGCCGCGACATCGAAGAGG
TTATTTACCTTTTGGCGATTGGACAGTCCGCGTTACCGGCGGACGATCAA
ACCGTTGAAAGCGCCAACGGATCTCTCCAATACCTAGAATATCTCAAAGA
AGGCTATGCCCCAGCTCAAGAAGGGCCACCCACGGTAACATCGTACCCAT
GTTGGGACTTGATCGAGGCACCTGTTAATAGAGACGCCCAGTTGCTATCA
CCGGGGGGGGGTAGTGCGTTGTCGGGGACTGAGAGAGGAGGGCATGCCGG
TGGGCTGTGTGTGGAGGGACTCCCCGTGTGGGCTCTACAGTTTCAGCTCG
GTACGCTAGCCTTCCGCGTGGGTGAATCCGCTCGAGCTATGGCGGCGATG
GAGGGCGCCTTCCTGTCGTACGAGACGTGGCTACCCAGATCTTCCGAGGA
ACACACTGGTGACTGTCCTGACGAAGATGGTATCCGGAGGGCGTGGTACC
AGGGACTGCCGATGTGGTCGGCGTGGGTGAAGCACCCCAGGCCGTGGCTA
GACCTTGGAGACATCGCATACCGCCAGGGTGTGGGAAGTTTCCACGTCGC
TGGCGAGGCGTACAAAGCAGCTCTGCAGAGAGCAGGAGATACCTTTTCTC
CTGACAAGAAGCAGGCAGCCATCATGTTTCGCATGGTGAAGTGCTGCAGT
CGGTGCGGGGACAAAGCCGGTGCTGTCGCCGGCCTCGAACGCCTGCTCTA
CGAGTACAACTTCTGGGACGAGAGATACAGGTCTGCTCGCAGTGCTGCAG
CAGCGTTGCGCCTTGTCAGGGACAGCGAAGACGCCATTGTGCAAAAAATT
AGGACCACAACCATGCGGCACCTTCAGGGCGTATGCTGGCGGTACTGGCT
TATTCACCACGACTTCGCAAATCAAGACAAGGCGGCCGCAAAAATACAGG
GGTTAGCGCGAGGCATGAAGGCCCGGGGCGTGGTTAAAGTGATCGTTAGG
GATCGACAAGCACGAGAACGTCTAGAGCAGCTTGTGGAAAATATGGGTGC
TTCTTGCGTCAAGAAACGCTGTCTGCGGAGGCTTGCAAAACAGATCGTTG
TTAACAGGTGA back to top
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