prot_L-digitata_M_contig101848.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig101848.1.1
Unique Nameprot_L-digitata_M_contig101848.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length295
Homology
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: N9V7Q1_9GAMM (Outer membrane efflux protein n=8 Tax=Aeromonas TaxID=642 RepID=N9V7Q1_9GAMM)

HSP 1 Score: 191 bits (484), Expect = 1.900e-53
Identity = 119/305 (39.02%), Postives = 182/305 (59.67%), Query Frame = 0
Query:    8 PITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDA---ARNETS-----------QQL--SSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASA-MPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 295
            PITL +A+ARA+ +NL+ R+K  E  +   ++   SF+MLP L +DA   +RN TS           Q L  S+S D   R A   + WN+LD GVSY  A+QQAD   IA E+ RK +Q +I++VR+AYWRA  A+RL+G++ A+   +K+A   S+ M +    D +  ++Y+R ++E+ RQ    +R L  A+ ELA  +N+  GT + +A  +     +P L +   ++E+ AL NRPELR +DY  R+S  + R+A+  MLPG +   G +Y S+SF +  +W   G ++  NLF+LFSG
Sbjct:   53 PITLYEAMARALTYNLESRLKIREEALAQQQIDLASFDMLPRLAMDAGYVSRNNTSASSSQSVDSGLQSLEPSTSQDRHRRVADLNMVWNVLDFGVSYVTAKQQADRRWIAEERRRKVVQTVIQDVRSAYWRAVAAERLLGRIDALLDRVKMARETSQKMSKERVGDPITVLSYQRALIEATRQLEEQRRALSLAKTELATLMNLPLGTDYTLALPSETEMPIPALNLDFAQLEQAALINRPELREQDYQTRISAAETRKAMLRMLPGLEFALGGHYDSNSFLVNQSWADAGAKVTWNLFNLFSG 357          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: UPI001993F5B4 (Uncharacterized protein n=2 Tax=Terasakiella brassicae TaxID=1634917 RepID=UPI001993F5B4)

HSP 1 Score: 190 bits (483), Expect = 7.640e-53
Identity = 112/306 (36.60%), Postives = 185/306 (60.46%), Query Frame = 0
Query:    7 APITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAA----------------RNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMS-LPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 295
            APITL  A+ARA+ +NL +R+K +E  +    L   +F +LP + ++A                   + S + S+S D   ++AS G TWN+LD G+SY RAQQ +D VLI+ E+ RK + +II++VR A+W AA AQRL+ ++  + + ++ A+++++  ERSG    + ++ Y+RE+++S+RQ   ++REL  A+  L+  +N++PGT F++ T  +   +P L +  +  +EK AL +RPELR E Y  R+S    R+A   MLPG +L    N+ S+S++    W S G  +  NLF++F+G
Sbjct:   69 APITLYDAMARALKYNLDQRLKLMETVLSRKNLTMANFSLLPQMTVEAGYTGRDNHMGSNSQSLTSGQESLESSTSSDRELKSASLGFTWNVLDFGLSYVRAQQLSDRVLISEERRRKVVHNIIQDVRAAFWDAASAQRLLDRIAPLTQTVQKALQDAKKAERSGQETPLAALRYQRELLDSLRQLKIMRRELHTAKTRLSTLMNLKPGTDFKLDTGNVGFDVPDLQLQDVERLEKIALLHRPELREEAYQARISHNDVRKAYLRMLPGLELNTAWNFDSNSYAWEQTWWSWGASINKNLFEVFTG 374          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A3N2E3S7_9ENTR (Outer membrane protein TolC n=22 Tax=Enterobacterales TaxID=91347 RepID=A0A3N2E3S7_9ENTR)

HSP 1 Score: 188 bits (478), Expect = 1.300e-52
Identity = 114/306 (37.25%), Postives = 180/306 (58.82%), Query Frame = 0
Query:    7 APITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAA----------------RNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATAT-LASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 295
            APITL+ A+ARA+ +NL+ R+K +E  +   ++   SF+MLP +  +A                 R  TS + S+S D   R A   + WNILD GVSY  A+QQAD+  IA E+ RK    I+++V++AYWRA  A+RL+ ++ A+   + +A   S+ M      D+V++ +Y+R ++++ RQ    +R L  A+ ELA  +N+  G+ +++      A   P L +   E+EK AL NRPELR +DY  R+S  + R++L  MLPG +++ G NY S+SF +  +W+  G ++  NLF+LFSG
Sbjct:   52 APITLHDAMARALKYNLEARLKVMEEALAQQQVDLASFDMLPKMAANAGYVTRSNVSASSSRSVERGVTSLEPSTSQDQTRRVADLNMVWNILDFGVSYVTARQQADKRWIAEERRRKVTHTIVQDVQSAYWRAVAAERLLHRIDALIERVNMARENSQTMAAQKVGDIVEAYSYQRALLDATRQLEEQRRALSLAKTELATLMNLPLGSDYQLVLPQDNALVEPELKVPFSELEKAALVNRPELREQDYQVRISAAETRKSLLRMLPGIEMSVGGNYDSNSFLVNQHWMDAGVKVTWNLFNLFSG 357          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: UPI001D0B0F6B (TolC family protein n=1 Tax=Microvirga rosea TaxID=2715425 RepID=UPI001D0B0F6B)

HSP 1 Score: 188 bits (478), Expect = 1.750e-52
Identity = 113/309 (36.57%), Postives = 188/309 (60.84%), Query Frame = 0
Query:    4 VPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDA---ARNETSQQLSSSDDVIT------------RTASAG---ITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFS 294
            VP APITL +A ARAVA+NL  R++     ++D +L    F++LPS+  +A   ARN+  + +SSS  ++T            RT   G   +TWN++DLGVSY +++QQAD  L+ARE+ R+ + +I ++VR+AYW A  A+R+   ++ I  + + A+  SRA+E   A   + S+ Y+R ++E ++Q  ++  +L  A+ +LA+ + +RPGTP+ +A      A+P + +++ +ME+ AL NRPE+R E YN R++  + R AL  ++PG  + A  N  S+S+ L  NW   G ++  +L +L S
Sbjct:   47 VPVAPITLEEAQARAVAYNLDNRLQMFNAVLQDRQLDLTKFDLLPSITANAGYVARNK--ELVSSSRSILTGQISEDETVSVDRTRGFGDLSVTWNVIDLGVSYLQSRQQADRALVAREQRRRVVNNIFQQVRSAYWTAVAAERIRPSIRPILADARRALGNSRALEEQRAQQPMDSLRYQRGLLELIQQLESVDDQLAIAKIQLAQLMGLRPGTPYRLALPASNPALPGIRLTVDQMERIALVNRPEIREEGYNTRIAQLEGRRALLKLVPGVSMLASLNADSNSYLLYNNWAEAGARVTASLVNLMS 353          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A1D9LHS7_9NEIS (Transporter n=26 Tax=Chromobacterium group TaxID=90153 RepID=A0A1D9LHS7_9NEIS)

HSP 1 Score: 187 bits (476), Expect = 3.000e-52
Identity = 111/305 (36.39%), Postives = 183/305 (60.00%), Query Frame = 0
Query:    6 AAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAARNETSQQ-LSSSDDVIT---------------RTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFS 294
            +AP+TL +A+ARA+ +NL  RVK +E  +   +L   S +MLP L + A     S+   SSS +V T               RTA   ++WN+LD GVSY  AQQQAD VLI  +++RK  Q ++++VR A+W+AAGAQ+L G+V A+ ++ + A+ ++R +E+      + ++ YRR++++ +RQ   ++  L +A+  LA  +N+ PG  F++AT +    +P L M +  ME+ AL NRPE+    Y+ R+S  + R+A+  +LPG + + G +Y S+ F +  +W   G ++  NL +LFS
Sbjct:   59 SAPVTLQEAMARALKYNLDYRVKLMEEAMAQRQLDLSSLDMLPKLALAAGYTTRSKDNASSSQNVATGEQSLVPSISSEKRDRTADLNLSWNVLDFGVSYYSAQQQADRVLILEQRKRKVAQQLMQQVREAWWQAAGAQQLQGRVDALLKDAQSALEDARQVEKQKLRSPLDALNYRRQLLDVIRQMSAVRNALSQAKPRLAAIMNVSPGQDFQVATPS-GMPVPTLGMDVDRMEEMALLNRPEVVEAQYSSRISALETRKAMAKLLPGLEFSVGQHYDSNKFLVNNSWSDAGLRISWNLLNLFS 362          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A1S8YND6_9GAMM (Transporter n=1 Tax=Izhakiella australiensis TaxID=1926881 RepID=A0A1S8YND6_9GAMM)

HSP 1 Score: 187 bits (475), Expect = 3.590e-52
Identity = 115/305 (37.70%), Postives = 179/305 (58.69%), Query Frame = 0
Query:    8 PITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAA----------------RNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLAS-AMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 295
            PITL+ A+ARA+ +NL+ R++ +E+ +   ++   SF+MLP +  +A                 R  TS + S+S D   R A   + WNILD GVSY  A QQ+D+  IA E+ RK    I+++V++AYWRA  A+RL+ ++ A+   + +A   S  M      D+V+S  Y+R ++++ RQ    +R L  A+ ELA  +N+ P T + +A    AS  +P L ++  E+E+ AL NRPELR +DY  R+S  + R++L  MLPG +L+ G NY S+SF +  +W   G ++  NLF+LFSG
Sbjct:   53 PITLHDAMARALKYNLEARLRVMEQAMAQKQVDLASFDMLPRMAAEAGYVTRDNVSASSSRSVERGVTSLEPSTSQDQTRRVADLTMVWNILDFGVSYITAHQQSDKRWIAEEERRKVTHTIVQDVQSAYWRAVAAERLLHRIDALIDRVNMARENSERMSAQKVGDLVESYTYQRALLDATRQLEEQRRALTLAKTELATLMNLPPDTVYTLALPDEASLTVPQLKVNFTELEEAALVNRPELREQDYQTRISASETRKSLLRMLPGIELSVGGNYDSNSFLVNQSWADAGVKVTWNLFNLFSG 357          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A1H6U722_9GAMM (Outer membrane protein TolC n=1 Tax=Frateuria terrea TaxID=529704 RepID=A0A1H6U722_9GAMM)

HSP 1 Score: 187 bits (474), Expect = 5.120e-52
Identity = 116/305 (38.03%), Postives = 183/305 (60.00%), Query Frame = 0
Query:    6 AAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAARNETSQQL-SSSDDVIT---------------RTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFS 294
            + PITL++A+ARA+ +NL  RVK +E  +   +L   SF++LP L   A        L SSS D++T               R A  G++WN+LD GVSY  A+QQAD VL A+++ RK +Q ++++ R AYW+AAGAQ+L  +++ +    + A+ +S+A+E+ G  D ++S+ Y+RE++  V Q  +I+ EL +A+ +LA  +N+ PG  FE+A      A P L ++  +ME+ AL NRPEL    YNER+   +  +A+  +LPG +L+AG +Y S+ F +   W   G Q+  NL +L S
Sbjct:   55 SGPITLDEAMARALKYNLDHRVKMMEEALAQQQLDLSSFDLLPQLTAAAGYTTRDNVLASSSQDIVTGQQSLVPSTSSEQNARRADLGMSWNVLDFGVSYYGARQQADRVLAAQQRRRKVVQLLMQQTREAYWQAAGAQKLQAQIEPLLTQAQQALGDSQAIEKQGLKDPLQSLGYQRELLSLVLQLESIRDELAQAKPKLASIMNLEPGRQFELAPPD-GFAEPRLAIAPEKMEETALLNRPELIEASYNERIGLNETHKAMAKLLPGIELSAGAHYDSNHFLVNNEWRDAGLQVSWNLLNLLS 358          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A2A4U2N8_9PROT (Transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A4U2N8_9PROT)

HSP 1 Score: 188 bits (477), Expect = 7.850e-52
Identity = 109/308 (35.39%), Postives = 178/308 (57.79%), Query Frame = 0
Query:    4 VPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSL----------------DIDAARNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 295
            V + PITL +A+ARA+ +NL  R+K +E  +   +L + +  MLP+L                 +  A N  S   SSS D   +T    +TWN+LDLG+SY RA+QQAD  LI RE+ RK L ++I+ VR+AYW A  A RL+ K+  ++  +  A+  +R  + +GA   + ++ YRRE+++++RQ   ++REL  ++  LA  +N++PG+ F +  +T+ S +P   + +  +E+ AL +RPELR E Y +R+S    + A   M+PG     G N  ++S++    W S G  +  NLF++F+G
Sbjct:   82 VVSHPITLEEAMARAIKYNLDHRLKVMENALASHQLTSANLSMLPALTATAGYTGRDNISGSNSVSLADNTESLTSSSSTDRDVKTFDLTLTWNVLDLGMSYVRAKQQADRQLITRERRRKVLHNVIQNVRSAYWNAVSADRLLVKITPLSVKVTTALDNARKSQMAGAEAPLSALRYRRELLDTLRQLKVLRRELTTSKFRLAALMNLKPGSAFSLDASTVTSTLPEFDLDVDRLERLALLHRPELREETYQDRISHNDVKLAYMGMIPGLSFNTGYNANTNSYAWEQTWYSWGSSITSNLFNVFTG 389          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A246F9C2_9PSED (Transporter n=6 Tax=Pseudomonas TaxID=286 RepID=A0A246F9C2_9PSED)

HSP 1 Score: 186 bits (471), Expect = 1.380e-51
Identity = 104/305 (34.10%), Postives = 184/305 (60.33%), Query Frame = 0
Query:    6 AAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAA----------------RNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFS 294
            + P+TLN A+ARA+ +NL+ R+K +E+ +   ++   +F+MLP + ++A                  N+ S + S+S D     A   + WN+LD GVSY  A+QQAD+ LI  E+ RK  Q I+++VR+AYWRA  A+RL+G++ ++   ++ A ++S+ +      D V++++Y+R ++E+ RQ    ++ L  A+ ELA  +N+ PGT  ++A       +P L +S+  +E+ AL +RPELR +DY  R+S  + ++A+  +LPG + +AG +Y S+S+ +  +W   G ++  NLF++ S
Sbjct:   51 SGPLTLNDALARAIKYNLEGRLKVMEQALASRQVDLATFDMLPRMALEAGYAGRNNVSASSSKSVLTNQQSLEPSTSQDRDRDVADLTMVWNVLDFGVSYVSAKQQADQRLILDERRRKVRQTIVQDVRSAYWRAVAAERLLGRIDSLTARVEQARKDSQNLSSQRIGDPVQAMSYQRSLIEATRQLEVQRKALSLAKTELATLINLPPGTDVKLAMPAEGYPLPELKVSMDSLEREALASRPELREQDYQSRISAAETKKAMLRLLPGLEFSAGGHYDSNSYLVNQSWADYGVKVTWNLFNVIS 355          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: UPI000E274D93 (TolC family protein n=1 Tax=Trinickia diaoshuihuensis TaxID=2292265 RepID=UPI000E274D93)

HSP 1 Score: 186 bits (473), Expect = 1.500e-51
Identity = 112/305 (36.72%), Postives = 178/305 (58.36%), Query Frame = 0
Query:    6 AAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAA-RNETSQQLSSSDDVITR---------------TASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFS 294
            + P+TL +A+ARA+ +NL  R+K +E  +   +L   SF+MLP L   A   N  +  +SSS+D  TR               TA    +WNILD GVSY  A++QAD VL+  ++ RK +Q ++++VR AYW+AAGA+RL  ++Q +    K A+ ESR  +  G    + ++ Y+  +++ +RQ   ++ +L EA+  LA  +NI PGT F++A      ++P   M +P+ME+ ALE RPEL    YNER+S  +  +A+  +LPG +L  G +Y S+SF +  +W + G  +  NL +L +
Sbjct:   86 SGPVTLEEAMARAIRYNLDHRLKMMEEALAQKQLDLASFDMLPKLTAQAGYSNRNNLLVSSSEDYFTRGESLPPSFSSDKNDRTADLSFSWNILDFGVSYFEAKEQADRVLVVEQRRRKVVQLMMQQVREAYWQAAGAERLSSRIQPLLVQAKQALDESRQSQSEGLRSPLDTLGYQHALLDIMRQLEAVRDQLDEAKPRLASLMNIAPGTDFKLAPPE-GFSVPAFDMPMPQMEETALERRPELVEASYNERISVNETHKAIAKLLPGIELQLGTHYDSNSFLMFHSWRAAGVNVSWNLLNLLN 389          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
N9V7Q1_9GAMM1.900e-5339.02Outer membrane efflux protein n=8 Tax=Aeromonas Ta... [more]
UPI001993F5B47.640e-5336.60Uncharacterized protein n=2 Tax=Terasakiella brass... [more]
A0A3N2E3S7_9ENTR1.300e-5237.25Outer membrane protein TolC n=22 Tax=Enterobactera... [more]
UPI001D0B0F6B1.750e-5236.57TolC family protein n=1 Tax=Microvirga rosea TaxID... [more]
A0A1D9LHS7_9NEIS3.000e-5236.39Transporter n=26 Tax=Chromobacterium group TaxID=9... [more]
A0A1S8YND6_9GAMM3.590e-5237.70Transporter n=1 Tax=Izhakiella australiensis TaxID... [more]
A0A1H6U722_9GAMM5.120e-5238.03Outer membrane protein TolC n=1 Tax=Frateuria terr... [more]
A0A2A4U2N8_9PROT7.850e-5235.39Transporter n=1 Tax=Rhodospirillaceae bacterium Ta... [more]
A0A246F9C2_9PSED1.380e-5134.10Transporter n=6 Tax=Pseudomonas TaxID=286 RepID=A0... [more]
UPI000E274D931.500e-5136.72TolC family protein n=1 Tax=Trinickia diaoshuihuen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..47
NoneNo IPR availableGENE3D1.20.1600.10Outer membrane efflux proteins (OEP)coord: 10..295
e-value: 1.3E-34
score: 121.7
NoneNo IPR availablePANTHERPTHR30026OUTER MEMBRANE PROTEIN TOLCcoord: 6..196
coord: 204..279
NoneNo IPR availableSUPERFAMILY56954Outer membrane efflux proteins (OEP)coord: 8..293
IPR003423Outer membrane efflux proteinPFAMPF02321OEPcoord: 11..192
e-value: 1.9E-15
score: 57.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101848contigL-digitata_M_contig101848:12..896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101848.1.1mRNA_L-digitata_M_contig101848.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig101848 12..920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig101848.1.1 ID=prot_L-digitata_M_contig101848.1.1|Name=mRNA_L-digitata_M_contig101848.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=295bp
MEYVPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSL
DIDAARNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVL
IAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRA
MERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGT
PFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQARE
ALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003423OMP_efflux