mRNA_L-digitata_M_contig101848.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101848.1.1
Unique NamemRNA_L-digitata_M_contig101848.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: N9V7Q1_9GAMM (Outer membrane efflux protein n=8 Tax=Aeromonas TaxID=642 RepID=N9V7Q1_9GAMM)

HSP 1 Score: 192 bits (487), Expect = 8.920e-54
Identity = 122/320 (38.12%), Postives = 189/320 (59.06%), Query Frame = 1
Query:    1 ADLQRINQMEYVPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDA---ARNETS-----------QQL--SSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASA-MPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 909
            ADL  + + +   + PITL +A+ARA+ +NL+ R+K  E  +   ++   SF+MLP L +DA   +RN TS           Q L  S+S D   R A   + WN+LD GVSY  A+QQAD   IA E+ RK +Q +I++VR+AYWRA  A+RL+G++ A+   +K+A   S+ M +    D +  ++Y+R ++E+ RQ    +R L  A+ ELA  +N+  GT + +A  +     +P L +   ++E+ AL NRPELR +DY  R+S  + R+A+  MLPG +   G +Y S+SF +  +W   G ++  NLF+LFSG
Sbjct:   38 ADLSAMFKDQDPVSKPITLYEAMARALTYNLESRLKIREEALAQQQIDLASFDMLPRLAMDAGYVSRNNTSASSSQSVDSGLQSLEPSTSQDRHRRVADLNMVWNVLDFGVSYVTAKQQADRRWIAEERRRKVVQTVIQDVRSAYWRAVAAERLLGRIDALLDRVKMARETSQKMSKERVGDPITVLSYQRALIEATRQLEEQRRALSLAKTELATLMNLPLGTDYTLALPSETEMPIPALNLDFAQLEQAALINRPELREQDYQTRISAAETRKAMLRMLPGLEFALGGHYDSNSFLVNQSWADAGAKVTWNLFNLFSG 357          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A1D9LHS7_9NEIS (Transporter n=26 Tax=Chromobacterium group TaxID=90153 RepID=A0A1D9LHS7_9NEIS)

HSP 1 Score: 189 bits (480), Expect = 1.000e-52
Identity = 114/318 (35.85%), Postives = 188/318 (59.12%), Query Frame = 1
Query:    1 ADLQRINQMEYVPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAARNETSQQ-LSSSDDVIT---------------RTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFS 906
            AD Q +   +   +AP+TL +A+ARA+ +NL  RVK +E  +   +L   S +MLP L + A     S+   SSS +V T               RTA   ++WN+LD GVSY  AQQQAD VLI  +++RK  Q ++++VR A+W+AAGAQ+L G+V A+ ++ + A+ ++R +E+      + ++ YRR++++ +RQ   ++  L +A+  LA  +N+ PG  F++AT +    +P L M +  ME+ AL NRPE+    Y+ R+S  + R+A+  +LPG + + G +Y S+ F +  +W   G ++  NL +LFS
Sbjct:   46 ADRQTMFGSQEAVSAPVTLQEAMARALKYNLDYRVKLMEEAMAQRQLDLSSLDMLPKLALAAGYTTRSKDNASSSQNVATGEQSLVPSISSEKRDRTADLNLSWNVLDFGVSYYSAQQQADRVLILEQRKRKVAQQLMQQVREAWWQAAGAQQLQGRVDALLKDAQSALEDARQVEKQKLRSPLDALNYRRQLLDVIRQMSAVRNALSQAKPRLAAIMNVSPGQDFQVATPS-GMPVPTLGMDVDRMEEMALLNRPEVVEAQYSSRISALETRKAMAKLLPGLEFSVGQHYDSNKFLVNNSWSDAGLRISWNLLNLFS 362          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: UPI001D0B0F6B (TolC family protein n=1 Tax=Microvirga rosea TaxID=2715425 RepID=UPI001D0B0F6B)

HSP 1 Score: 189 bits (480), Expect = 1.150e-52
Identity = 114/319 (35.74%), Postives = 193/319 (60.50%), Query Frame = 1
Query:    4 DLQRINQMEYVPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDA---ARNETSQQLSSSDDVIT------------RTASAG---ITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFS 906
            D  +++ +  VP APITL +A ARAVA+NL  R++     ++D +L    F++LPS+  +A   ARN+  + +SSS  ++T            RT   G   +TWN++DLGVSY +++QQAD  L+ARE+ R+ + +I ++VR+AYW A  A+R+   ++ I  + + A+  SRA+E   A   + S+ Y+R ++E ++Q  ++  +L  A+ +LA+ + +RPGTP+ +A      A+P + +++ +ME+ AL NRPE+R E YN R++  + R AL  ++PG  + A  N  S+S+ L  NW   G ++  +L +L S
Sbjct:   37 DRAQLDGISPVPVAPITLEEAQARAVAYNLDNRLQMFNAVLQDRQLDLTKFDLLPSITANAGYVARNK--ELVSSSRSILTGQISEDETVSVDRTRGFGDLSVTWNVIDLGVSYLQSRQQADRALVAREQRRRVVNNIFQQVRSAYWTAVAAERIRPSIRPILADARRALGNSRALEEQRAQQPMDSLRYQRGLLELIQQLESVDDQLAIAKIQLAQLMGLRPGTPYRLALPASNPALPGIRLTVDQMERIALVNRPEIREEGYNTRIAQLEGRRALLKLVPGVSMLASLNADSNSYLLYNNWAEAGARVTASLVNLMS 353          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A3N2E3S7_9ENTR (Outer membrane protein TolC n=22 Tax=Enterobacterales TaxID=91347 RepID=A0A3N2E3S7_9ENTR)

HSP 1 Score: 189 bits (479), Expect = 1.200e-52
Identity = 116/319 (36.36%), Postives = 185/319 (57.99%), Query Frame = 1
Query:    4 DLQRINQMEYVPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAA----------------RNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATAT-LASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 909
            DL+ +   +    APITL+ A+ARA+ +NL+ R+K +E  +   ++   SF+MLP +  +A                 R  TS + S+S D   R A   + WNILD GVSY  A+QQAD+  IA E+ RK    I+++V++AYWRA  A+RL+ ++ A+   + +A   S+ M      D+V++ +Y+R ++++ RQ    +R L  A+ ELA  +N+  G+ +++      A   P L +   E+EK AL NRPELR +DY  R+S  + R++L  MLPG +++ G NY S+SF +  +W+  G ++  NLF+LFSG
Sbjct:   39 DLRTMFSNQEPVTAPITLHDAMARALKYNLEARLKVMEEALAQQQVDLASFDMLPKMAANAGYVTRSNVSASSSRSVERGVTSLEPSTSQDQTRRVADLNMVWNILDFGVSYVTARQQADKRWIAEERRRKVTHTIVQDVQSAYWRAVAAERLLHRIDALIERVNMARENSQTMAAQKVGDIVEAYSYQRALLDATRQLEEQRRALSLAKTELATLMNLPLGSDYQLVLPQDNALVEPELKVPFSELEKAALVNRPELREQDYQVRISAAETRKSLLRMLPGIEMSVGGNYDSNSFLVNQHWMDAGVKVTWNLFNLFSG 357          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: UPI001993F5B4 (Uncharacterized protein n=2 Tax=Terasakiella brassicae TaxID=1634917 RepID=UPI001993F5B4)

HSP 1 Score: 190 bits (482), Expect = 1.380e-52
Identity = 112/306 (36.60%), Postives = 185/306 (60.46%), Query Frame = 1
Query:   43 APITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAA----------------RNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMS-LPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 909
            APITL  A+ARA+ +NL +R+K +E  +    L   +F +LP + ++A                   + S + S+S D   ++AS G TWN+LD G+SY RAQQ +D VLI+ E+ RK + +II++VR A+W AA AQRL+ ++  + + ++ A+++++  ERSG    + ++ Y+RE+++S+RQ   ++REL  A+  L+  +N++PGT F++ T  +   +P L +  +  +EK AL +RPELR E Y  R+S    R+A   MLPG +L    N+ S+S++    W S G  +  NLF++F+G
Sbjct:   69 APITLYDAMARALKYNLDQRLKLMETVLSRKNLTMANFSLLPQMTVEAGYTGRDNHMGSNSQSLTSGQESLESSTSSDRELKSASLGFTWNVLDFGLSYVRAQQLSDRVLISEERRRKVVHNIIQDVRAAFWDAASAQRLLDRIAPLTQTVQKALQDAKKAERSGQETPLAALRYQRELLDSLRQLKIMRRELHTAKTRLSTLMNLKPGTDFKLDTGNVGFDVPDLQLQDVERLEKIALLHRPELREEAYQARISHNDVRKAYLRMLPGLELNTAWNFDSNSYAWEQTWWSWGASINKNLFEVFTG 374          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A2A4U2N8_9PROT (Transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A4U2N8_9PROT)

HSP 1 Score: 189 bits (481), Expect = 2.660e-52
Identity = 111/318 (34.91%), Postives = 183/318 (57.55%), Query Frame = 1
Query:    4 DLQRINQMEYVPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSL----------------DIDAARNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 909
            D+  + Q + V + PITL +A+ARA+ +NL  R+K +E  +   +L + +  MLP+L                 +  A N  S   SSS D   +T    +TWN+LDLG+SY RA+QQAD  LI RE+ RK L ++I+ VR+AYW A  A RL+ K+  ++  +  A+  +R  + +GA   + ++ YRRE+++++RQ   ++REL  ++  LA  +N++PG+ F +  +T+ S +P   + +  +E+ AL +RPELR E Y +R+S    + A   M+PG     G N  ++S++    W S G  +  NLF++F+G
Sbjct:   72 DVVDLFQAQDVVSHPITLEEAMARAIKYNLDHRLKVMENALASHQLTSANLSMLPALTATAGYTGRDNISGSNSVSLADNTESLTSSSSTDRDVKTFDLTLTWNVLDLGMSYVRAKQQADRQLITRERRRKVLHNVIQNVRSAYWNAVSADRLLVKITPLSVKVTTALDNARKSQMAGAEAPLSALRYRRELLDTLRQLKVLRRELTTSKFRLAALMNLKPGSAFSLDASTVTSTLPEFDLDVDRLERLALLHRPELREETYQDRISHNDVKLAYMGMIPGLSFNTGYNANTNSYAWEQTWYSWGSSITSNLFNVFTG 389          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A1S8YND6_9GAMM (Transporter n=1 Tax=Izhakiella australiensis TaxID=1926881 RepID=A0A1S8YND6_9GAMM)

HSP 1 Score: 187 bits (474), Expect = 6.460e-52
Identity = 115/305 (37.70%), Postives = 179/305 (58.69%), Query Frame = 1
Query:   46 PITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAA----------------RNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLAS-AMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 909
            PITL+ A+ARA+ +NL+ R++ +E+ +   ++   SF+MLP +  +A                 R  TS + S+S D   R A   + WNILD GVSY  A QQ+D+  IA E+ RK    I+++V++AYWRA  A+RL+ ++ A+   + +A   S  M      D+V+S  Y+R ++++ RQ    +R L  A+ ELA  +N+ P T + +A    AS  +P L ++  E+E+ AL NRPELR +DY  R+S  + R++L  MLPG +L+ G NY S+SF +  +W   G ++  NLF+LFSG
Sbjct:   53 PITLHDAMARALKYNLEARLRVMEQAMAQKQVDLASFDMLPRMAAEAGYVTRDNVSASSSRSVERGVTSLEPSTSQDQTRRVADLTMVWNILDFGVSYITAHQQSDKRWIAEEERRKVTHTIVQDVQSAYWRAVAAERLLHRIDALIDRVNMARENSERMSAQKVGDLVESYTYQRALLDATRQLEEQRRALTLAKTELATLMNLPPDTVYTLALPDEASLTVPQLKVNFTELEEAALVNRPELREQDYQTRISASETRKSLLRMLPGIELSVGGNYDSNSFLVNQSWADAGVKVTWNLFNLFSG 357          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A1H6U722_9GAMM (Outer membrane protein TolC n=1 Tax=Frateuria terrea TaxID=529704 RepID=A0A1H6U722_9GAMM)

HSP 1 Score: 187 bits (474), Expect = 6.590e-52
Identity = 119/318 (37.42%), Postives = 188/318 (59.12%), Query Frame = 1
Query:    1 ADLQRINQMEYVPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAARNETSQQL-SSSDDVIT---------------RTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFS 906
            AD Q +   +   + PITL++A+ARA+ +NL  RVK +E  +   +L   SF++LP L   A        L SSS D++T               R A  G++WN+LD GVSY  A+QQAD VL A+++ RK +Q ++++ R AYW+AAGAQ+L  +++ +    + A+ +S+A+E+ G  D ++S+ Y+RE++  V Q  +I+ EL +A+ +LA  +N+ PG  FE+A      A P L ++  +ME+ AL NRPEL    YNER+   +  +A+  +LPG +L+AG +Y S+ F +   W   G Q+  NL +L S
Sbjct:   42 ADSQVMFNGQTPVSGPITLDEAMARALKYNLDHRVKMMEEALAQQQLDLSSFDLLPQLTAAAGYTTRDNVLASSSQDIVTGQQSLVPSTSSEQNARRADLGMSWNVLDFGVSYYGARQQADRVLAAQQRRRKVVQLLMQQTREAYWQAAGAQKLQAQIEPLLTQAQQALGDSQAIEKQGLKDPLQSLGYQRELLSLVLQLESIRDELAQAKPKLASIMNLEPGRQFELAPPD-GFAEPRLAIAPEKMEETALLNRPELIEASYNERIGLNETHKAMAKLLPGIELSAGAHYDSNHFLVNNEWRDAGLQVSWNLLNLLS 358          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A286G5C8_9PROT (Outer membrane protein TolC n=1 Tax=Caenispirillum bisanense TaxID=414052 RepID=A0A286G5C8_9PROT)

HSP 1 Score: 189 bits (479), Expect = 9.040e-52
Identity = 116/324 (35.80%), Postives = 193/324 (59.57%), Query Frame = 1
Query:    1 ADLQRINQMEYVPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSL----------DIDAARN---------ETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASA--MPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG 909
            ADL  + Q +    API+L +A+ARA+ FNL RR+K +E  +   EL      +LP+L          + DA+ N         +T    ++SD+    TA+  ++WN+LD G+SY RA+QQAD+ LI  E+ R+ +Q+++++VR AYWRAA A R++ ++ A+  +++ A+ ++ A         + ++ Y+R ++E+ RQ   ++ ++++AR ELA  +N+RPGTPF+IA A   +   +P LP  L  +E  AL NR E R E Y  R+++ ++  A+  MLPG +LT+  +Y+++ F L   W S G +L  NL +LF+G
Sbjct:   29 ADLAAMFQDQDPVTAPISLEEAVARALKFNLDRRLKLMEEAVSRRELDVAEMSLLPNLAASAGYFGRSNYDASVNKTLTGPNAGQTGNTYTTSDEKAFGTANLVVSWNVLDFGISYIRARQQADQALIVSERRRQVVQNVVQDVRAAYWRAAAADRILKRLDALLPDVQRAVADAEAAVTQRIGPQLDALEYQRSMLEAERQLKALRSQMQQARTELATLMNLRPGTPFDIAAAQAPTPDEVPTLPADLDTLELAALANRSETRGEAYQLRINENESWVAMLRMLPGLELTSSLDYSANKFLLNDTWASGGVELTWNLLNLFAG 352          
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Match: A0A2R2IS45_9NEIS (Transporter n=3 Tax=Chromobacterium group TaxID=90153 RepID=A0A2R2IS45_9NEIS)

HSP 1 Score: 186 bits (472), Expect = 1.190e-51
Identity = 113/318 (35.53%), Postives = 190/318 (59.75%), Query Frame = 1
Query:    1 ADLQRINQMEYVPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSLDIDAARNETSQQ-LSSSDDVIT---------------RTASAGITWNILDLGVSYARAQQQADEVLIAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRAMERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGTPFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQAREALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFS 906
            AD Q +   +   +AP+TL +A+ARA+ +NL  RVK +E  +   +L   S +MLP L + A     S+   SSS ++ T               RTA   ++WN+LD GVSY  AQQQAD VLI  +++RK  Q ++++VR A+W+AAGAQRL G+V A+ ++ + A+ ++R +E+      + ++ YRR++++ +RQ   ++  L +A+  LA  +N+ PG  F++A A+    +P L + + +ME  AL NRPE+   +Y++R+S  + R+A+  +LPG + + G +Y S+ F +  +W   G ++  NL +LFS
Sbjct:   34 ADRQAMFGSQEALSAPVTLQEAMARALKYNLDYRVKLMEEAMAQRQLDLSSLDMLPKLALAAGYTSRSKDNASSSQNIATGEQSLAPSISSEKRDRTADLNLSWNVLDFGVSYFSAQQQADRVLILEQRKRKVAQQLMQQVREAWWQAAGAQRLQGRVDALLKDAESALDDARHVEQQKLRAPLDALNYRRQLLDVIRQMSAVRNALSQAKPRLAAIMNVTPGQDFQVA-ASADMPVPALGIDVDKMEDMALLNRPEVVEANYSKRISALETRKAIAKLLPGLEFSVGQHYDSNKFLINNSWSDAGLRISWNLLNLFS 350          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101848.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
N9V7Q1_9GAMM8.920e-5438.13Outer membrane efflux protein n=8 Tax=Aeromonas Ta... [more]
A0A1D9LHS7_9NEIS1.000e-5235.85Transporter n=26 Tax=Chromobacterium group TaxID=9... [more]
UPI001D0B0F6B1.150e-5235.74TolC family protein n=1 Tax=Microvirga rosea TaxID... [more]
A0A3N2E3S7_9ENTR1.200e-5236.36Outer membrane protein TolC n=22 Tax=Enterobactera... [more]
UPI001993F5B41.380e-5236.60Uncharacterized protein n=2 Tax=Terasakiella brass... [more]
A0A2A4U2N8_9PROT2.660e-5234.91Transporter n=1 Tax=Rhodospirillaceae bacterium Ta... [more]
A0A1S8YND6_9GAMM6.460e-5237.70Transporter n=1 Tax=Izhakiella australiensis TaxID... [more]
A0A1H6U722_9GAMM6.590e-5237.42Outer membrane protein TolC n=1 Tax=Frateuria terr... [more]
A0A286G5C8_9PROT9.040e-5235.80Outer membrane protein TolC n=1 Tax=Caenispirillum... [more]
A0A2R2IS45_9NEIS1.190e-5135.53Transporter n=3 Tax=Chromobacterium group TaxID=90... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101848contigL-digitata_M_contig101848:12..920 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1268237.G114_13763
PFAMsOEP
Model size909
Max annot lvl135624|Aeromonadales
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.12e-54
EggNOG OGsCOG1538@1|root,COG1538@2|Bacteria,1MUHM@1224|Proteobacteria,1RNNS@1236|Gammaproteobacteria,1Y539@135624|Aeromonadales
DescriptionOuter membrane efflux protein
Cds size885
COG categoryMU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406623.5373719-CDS-L-digitata_M_contig101848:11..8961682406623.5373719-CDS-L-digitata_M_contig101848:11..896Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101848 12..896 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406623.5510073-UTR-L-digitata_M_contig101848:896..9201682406623.5510073-UTR-L-digitata_M_contig101848:896..920Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig101848 897..920 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101848.1.1prot_L-digitata_M_contig101848.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101848 12..896 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101848.1.1

>prot_L-digitata_M_contig101848.1.1 ID=prot_L-digitata_M_contig101848.1.1|Name=mRNA_L-digitata_M_contig101848.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=295bp
MEYVPAAPITLNQAIARAVAFNLQRRVKEIEREIEDAELQTRSFEMLPSL
DIDAARNETSQQLSSSDDVITRTASAGITWNILDLGVSYARAQQQADEVL
IAREKERKALQDIIREVRTAYWRAAGAQRLMGKVQAIARNIKVAMRESRA
MERSGANDVVKSVAYRREIVESVRQALTIQRELREARGELAEHLNIRPGT
PFEIATATLASAMPVLPMSLPEMEKHALENRPELRVEDYNERMSDWQARE
ALFDMLPGAKLTAGPNYTSDSFSLAPNWISTGFQLGMNLFDLFSG
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mRNA from alignment at L-digitata_M_contig101848:12..920-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101848.1.1 ID=mRNA_L-digitata_M_contig101848.1.1|Name=mRNA_L-digitata_M_contig101848.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=909bp|location=Sequence derived from alignment at L-digitata_M_contig101848:12..920- (Laminaria digitata LdigPH10_18mv male)
GCGGATCTGCAGCGTATCAATCAGATGGAATACGTGCCGGCGGCGCCGAT CACCCTCAATCAGGCGATCGCCCGCGCCGTCGCCTTCAACCTGCAGCGGC GGGTGAAGGAAATTGAGCGCGAAATCGAAGACGCGGAGCTGCAAACCAGG AGTTTCGAGATGCTGCCGAGTCTCGATATCGATGCCGCCCGTAACGAGAC GAGCCAACAGCTTTCGTCCAGCGACGATGTGATCACGCGCACGGCAAGCG CGGGCATTACATGGAATATTCTGGATCTGGGCGTCTCCTACGCGCGGGCG CAGCAGCAGGCGGACGAAGTCCTGATTGCGCGGGAAAAAGAGCGTAAAGC CCTGCAGGATATCATCCGCGAGGTCCGGACCGCGTATTGGCGGGCGGCGG GCGCGCAACGCCTGATGGGCAAGGTTCAGGCGATCGCCCGCAACATTAAG GTCGCCATGCGGGAATCCCGGGCGATGGAGCGATCCGGCGCAAACGATGT GGTCAAATCCGTAGCCTATCGACGCGAGATCGTGGAATCCGTACGTCAGG CGCTGACCATCCAGCGCGAACTGCGCGAGGCCCGCGGCGAACTGGCGGAA CATCTTAACATTCGGCCGGGAACGCCTTTTGAAATCGCCACCGCGACCCT TGCATCGGCGATGCCTGTGCTGCCGATGTCTCTCCCAGAGATGGAAAAGC ACGCGCTTGAAAACCGCCCGGAGCTGCGCGTCGAGGATTATAACGAGCGG ATGAGCGACTGGCAGGCGCGGGAGGCGCTGTTCGATATGCTGCCGGGCGC CAAACTCACGGCCGGACCGAACTATACCAGCGATTCATTCAGCCTGGCGC CGAACTGGATCAGCACCGGGTTTCAGCTCGGCATGAACCTGTTCGATCTC TTTTCCGGC
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Coding sequence (CDS) from alignment at L-digitata_M_contig101848:12..920-

>mRNA_L-digitata_M_contig101848.1.1 ID=mRNA_L-digitata_M_contig101848.1.1|Name=mRNA_L-digitata_M_contig101848.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=885bp|location=Sequence derived from alignment at L-digitata_M_contig101848:12..920- (Laminaria digitata LdigPH10_18mv male)
ATGGAATACGTGCCGGCGGCGCCGATCACCCTCAATCAGGCGATCGCCCG
CGCCGTCGCCTTCAACCTGCAGCGGCGGGTGAAGGAAATTGAGCGCGAAA
TCGAAGACGCGGAGCTGCAAACCAGGAGTTTCGAGATGCTGCCGAGTCTC
GATATCGATGCCGCCCGTAACGAGACGAGCCAACAGCTTTCGTCCAGCGA
CGATGTGATCACGCGCACGGCAAGCGCGGGCATTACATGGAATATTCTGG
ATCTGGGCGTCTCCTACGCGCGGGCGCAGCAGCAGGCGGACGAAGTCCTG
ATTGCGCGGGAAAAAGAGCGTAAAGCCCTGCAGGATATCATCCGCGAGGT
CCGGACCGCGTATTGGCGGGCGGCGGGCGCGCAACGCCTGATGGGCAAGG
TTCAGGCGATCGCCCGCAACATTAAGGTCGCCATGCGGGAATCCCGGGCG
ATGGAGCGATCCGGCGCAAACGATGTGGTCAAATCCGTAGCCTATCGACG
CGAGATCGTGGAATCCGTACGTCAGGCGCTGACCATCCAGCGCGAACTGC
GCGAGGCCCGCGGCGAACTGGCGGAACATCTTAACATTCGGCCGGGAACG
CCTTTTGAAATCGCCACCGCGACCCTTGCATCGGCGATGCCTGTGCTGCC
GATGTCTCTCCCAGAGATGGAAAAGCACGCGCTTGAAAACCGCCCGGAGC
TGCGCGTCGAGGATTATAACGAGCGGATGAGCGACTGGCAGGCGCGGGAG
GCGCTGTTCGATATGCTGCCGGGCGCCAAACTCACGGCCGGACCGAACTA
TACCAGCGATTCATTCAGCCTGGCGCCGAACTGGATCAGCACCGGGTTTC
AGCTCGGCATGAACCTGTTCGATCTCTTTTCCGGC
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