prot_L-digitata_M_contig10184.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10184.1.1
Unique Nameprot_L-digitata_M_contig10184.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length142
Homology
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BLAST of mRNA_L-digitata_M_contig10184.1.1 vs. uniprot
Match: D8LTT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT2_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 8.610e-28
Identity = 72/123 (58.54%), Postives = 84/123 (68.29%), Query Frame = 0 
Query:    4 SFRSASWADKLVVKREQQSVLVRQLERELECTVSALKDERRERRAQTEALKAKVDGIRGTVREREEELERRGAMAQTLMTELEXXXXXXXXXXXXXXXXXXXXXKTISRLREDKSEIEARLRQ 126
            +FRSASWA+KLV KRE+QSVLV+QLEREL  TVSALKDERRERR QTE L+ K++  R TV +RE EL+RR  M  TLM ELE                     KT++RLRED  E+EARLRQ
Sbjct:  511 AFRSASWAEKLVTKREEQSVLVKQLERELASTVSALKDERRERRGQTETLRRKLEETRATVGDREAELQRRERMTTTLMGELEALQSRCDRLVASREERAEEADKTMARLREDNRELEARLRQ 633
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BLAST of mRNA_L-digitata_M_contig10184.1.1 vs. uniprot
Match: A0A6H5KDC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC5_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.380e-23
Identity = 74/139 (53.24%), Postives = 84/139 (60.43%), Query Frame = 0 
Query:    4 SFRSASWADKLVVKREQQSVLVRQLERELECTVSALKDERRERRAQTEALKAKVDGIRGTVREREEELERRGAMAQTLMTELEXXXXXXXXXXXXXXXXXXXXXKTISRLREDKSEIEARLRQADAAAAEARVCRDGAE 142
            +F SASWA KLV KRE+QSVLV+QLEREL  TVSALKDERRERR QTE L+ K++  R  V  RE EL+RR  M  TLM ELE                     KT+           ARLR+ADAAAAEAR  R GA+
Sbjct:  502 AFSSASWAAKLVTKREEQSVLVKQLERELASTVSALKDERRERRGQTETLRRKLEETRAAVGYREAELQRRERMTTTLMGELEALQSRCDRLVASREERAEEADKTM-----------ARLREADAAAAEARSARAGAD 629
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10184.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTT2_ECTSI8.610e-2858.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDC5_9PHAE2.380e-2353.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..130
NoneNo IPR availableCOILSCoilCoilcoord: 25..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10184contigL-digitata_M_contig10184:2028..4788 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10184.1.1mRNA_L-digitata_M_contig10184.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10184 2028..4788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10184.1.1 ID=prot_L-digitata_M_contig10184.1.1|Name=mRNA_L-digitata_M_contig10184.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=142bp
VESSFRSASWADKLVVKREQQSVLVRQLERELECTVSALKDERRERRAQT
EALKAKVDGIRGTVREREEELERRGAMAQTLMTELEALQSRCDRLSTWRE
ERTEEAEKTISRLREDKSEIEARLRQADAAAAEARVCRDGAE
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