prot_L-digitata_M_contig101838.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig101838.1.1
Unique Nameprot_L-digitata_M_contig101838.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length197
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101838.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 76..194
e-value: 2.3E-6
score: 29.1
IPR011044Quinoprotein amine dehydrogenase, beta chain-likeSUPERFAMILY50969YVTN repeat-like/Quinoprotein amine dehydrogenasecoord: 92..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101838contigL-digitata_M_contig101838:22..612 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101838.1.1mRNA_L-digitata_M_contig101838.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig101838 22..612 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig101838.1.1 ID=prot_L-digitata_M_contig101838.1.1|Name=mRNA_L-digitata_M_contig101838.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=197bp
MRNHDIWLCALVLSLPWAGCSGDEALRSGAAPEDRAGACGLDSDCPAGLI
CQAPVCVSPEDMLPPDQEEARLVGRPAASRTRLFTLATDQDALLVLHPDS
LRLEAVPVPAGPEALVVVPDREAALVLSGGARALTWVDMEGGPDVKILRL
SRRFHTLSVSPDGAWAVLWTPSGTVAEDGAEGLVARVDLDALSRGEP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011044Quino_amine_DH_bsu