prot_L-digitata_M_contig101771.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig101771.2.1
Unique Nameprot_L-digitata_M_contig101771.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length90
Homology
[Close]
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Match: A0A2E5L7U9_9PROT (30S ribosomal protein S15 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5L7U9_9PROT)

HSP 1 Score: 159 bits (402), Expect = 3.320e-49
Identity = 81/89 (91.01%), Postives = 84/89 (94.38%), Query Frame = 0 
Query:    1 MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR 89
            MSITQERK+ELI EYSTGE+DTGSPEVQVAILSERI NLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYE LI  +GLRR
Sbjct:    1 MSITQERKAELITEYSTGEHDTGSPEVQVAILSERINNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYENLIGQIGLRR 89
[Close]
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Match: A0A2D8PRU8_9PROT (30S ribosomal protein S15 n=3 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PRU8_9PROT)

HSP 1 Score: 156 bits (395), Expect = 3.890e-48
Identity = 82/89 (92.13%), Postives = 83/89 (93.26%), Query Frame = 0 
Query:    1 MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR 89
            MSITQERK+ELI EYSTGE DTGSPEVQVAILSERI NLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYE LI  LGLRR
Sbjct:    1 MSITQERKAELIGEYSTGEQDTGSPEVQVAILSERIVNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYETLIGRLGLRR 89
[Close]
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Match: A0A2S6QAG1_9PROT (30S ribosomal protein S15 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QAG1_9PROT)

HSP 1 Score: 154 bits (388), Expect = 4.540e-47
Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 0 
Query:    1 MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR 89
            MSITQERK+ LI +YSTGE+DTGSPEVQVAILSERIG LTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKD SRYE LI  LGLRR
Sbjct:    1 MSITQERKAALIADYSTGEHDTGSPEVQVAILSERIGKLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDHSRYETLIGRLGLRR 89
[Close]
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Match: A0A2D8G572_9PROT (30S ribosomal protein S15 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G572_9PROT)

HSP 1 Score: 153 bits (387), Expect = 6.460e-47
Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 0 
Query:    1 MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR 89
            MSITQ+RK+ELI EYSTGEYDTGSPEVQVAILSERI NLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQ RY+  I  LGLRR
Sbjct:    1 MSITQQRKAELITEYSTGEYDTGSPEVQVAILSERIVNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQLRYDAXIGRLGLRR 89
[Close]
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Match: A0A212K9Q7_9PROT (30S ribosomal protein S15 n=1 Tax=uncultured Alphaproteobacteria bacterium TaxID=91750 RepID=A0A212K9Q7_9PROT)

HSP 1 Score: 144 bits (363), Expect = 2.960e-43
Identity = 74/89 (83.15%), Postives = 79/89 (88.76%), Query Frame = 0 
Query:    1 MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR 89
            MSITQERK ELIKEY+T E DTGSPEVQVA+LSERI NLTEHLKEHKKDFHSRRGLL+MVGQRRRLLDY+K KD  RY+ LI  LGLRR
Sbjct:    1 MSITQERKQELIKEYATAEGDTGSPEVQVAVLSERIKNLTEHLKEHKKDFHSRRGLLIMVGQRRRLLDYVKAKDVKRYDSLIQRLGLRR 89
[Close]
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Match: A0A6J4FJN8_9PROT (30S ribosomal protein S15 n=1 Tax=Magnetospirillum sp. SS-4 TaxID=2681465 RepID=A0A6J4FJN8_9PROT)

HSP 1 Score: 143 bits (361), Expect = 5.970e-43
Identity = 74/89 (83.15%), Postives = 79/89 (88.76%), Query Frame = 0 
Query:    1 MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR 89
            MSIT ER  EL+KEYST E DTGSPEVQVAILSERI NLTEHLKEHKKDFHSRRGLL+MVGQRRR+LDY+K KDQ RYE LIA LGLR+
Sbjct:    1 MSITPERTQELVKEYSTKENDTGSPEVQVAILSERIRNLTEHLKEHKKDFHSRRGLLIMVGQRRRMLDYMKGKDQKRYEGLIARLGLRK 89
[Close]
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Match: UPI0004852CE9 (30S ribosomal protein S15 n=2 Tax=Rhodovibrio TaxID=85274 RepID=UPI0004852CE9)

HSP 1 Score: 143 bits (361), Expect = 5.970e-43
Identity = 71/89 (79.78%), Postives = 80/89 (89.89%), Query Frame = 0 
Query:    1 MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR 89
            MSIT ERK EL+KEY   + DTGSPEVQ+AIL+ERI NLTEH+K+HKKDFHSRRGLL+MVGQRRRLLDYLKRKD+SRY+K I SLGLRR
Sbjct:    1 MSITTERKQELVKEYGANDNDTGSPEVQIAILTERIQNLTEHMKDHKKDFHSRRGLLIMVGQRRRLLDYLKRKDKSRYDKTIQSLGLRR 89
[Close]
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Match: A0A545TRS9_9PROT (30S ribosomal protein S15 n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TRS9_9PROT)

HSP 1 Score: 142 bits (359), Expect = 1.200e-42
Identity = 74/89 (83.15%), Postives = 81/89 (91.01%), Query Frame = 0 
Query:    1 MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR 89
            MSIT ERK+EL+KE++T E DTGSPEVQVAIL+ERI NLTEHLK HKKDFHSRRGLL+MVGQRRRLLDYLKRK+QSRYE LI  LGLRR
Sbjct:    1 MSITAERKNELVKEFATHEGDTGSPEVQVAILTERIINLTEHLKTHKKDFHSRRGLLIMVGQRRRLLDYLKRKEQSRYEALIQRLGLRR 89
[Close]
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Match: A0A1X7PTJ1_AZOLI (30S ribosomal protein S15 n=22 Tax=Azospirillum TaxID=191 RepID=A0A1X7PTJ1_AZOLI)

HSP 1 Score: 142 bits (358), Expect = 1.710e-42
Identity = 73/89 (82.02%), Postives = 78/89 (87.64%), Query Frame = 0 
Query:    1 MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR 89
            MSIT ERK ELIKEYS G+ DTGSPEVQV+IL+ERI NLTEHLK HKKDFHSRRGLL+MVGQRRRLLDYLK+KD SRY  LI  LGLRR
Sbjct:    1 MSITPERKQELIKEYSRGQADTGSPEVQVSILTERISNLTEHLKSHKKDFHSRRGLLVMVGQRRRLLDYLKKKDNSRYATLIERLGLRR 89
[Close]
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Match: K2J5L5_9PROT (30S ribosomal protein S15 n=3 Tax=Oceanibaculum TaxID=659693 RepID=K2J5L5_9PROT)

HSP 1 Score: 142 bits (357), Expect = 2.430e-42
Identity = 73/89 (82.02%), Postives = 79/89 (88.76%), Query Frame = 0 
Query:    1 MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDFHSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR 89
            MSIT ERK ELIKEY+ GE DTGSPEVQVAI+SERI NLT+HL +HKKD HSRRGLL++VGQRRRLLDYLKRKDQSRYE LI  LGLRR
Sbjct:    1 MSITAERKQELIKEYAQGEGDTGSPEVQVAIMSERIRNLTDHLNDHKKDHHSRRGLLVLVGQRRRLLDYLKRKDQSRYEGLIGRLGLRR 89
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101771.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E5L7U9_9PROT3.320e-4991.0130S ribosomal protein S15 n=1 Tax=Rhodospirillacea... [more]
A0A2D8PRU8_9PROT3.890e-4892.1330S ribosomal protein S15 n=3 Tax=Rhodospirillacea... [more]
A0A2S6QAG1_9PROT4.540e-4788.7630S ribosomal protein S15 n=1 Tax=Alphaproteobacte... [more]
A0A2D8G572_9PROT6.460e-4788.7630S ribosomal protein S15 n=1 Tax=Alphaproteobacte... [more]
A0A212K9Q7_9PROT2.960e-4383.1530S ribosomal protein S15 n=1 Tax=uncultured Alpha... [more]
A0A6J4FJN8_9PROT5.970e-4383.1530S ribosomal protein S15 n=1 Tax=Magnetospirillum... [more]
UPI0004852CE95.970e-4379.7830S ribosomal protein S15 n=2 Tax=Rhodovibrio TaxI... [more]
A0A545TRS9_9PROT1.200e-4283.1530S ribosomal protein S15 n=1 Tax=Denitrobaculum t... [more]
A0A1X7PTJ1_AZOLI1.710e-4282.0230S ribosomal protein S15 n=22 Tax=Azospirillum Ta... [more]
K2J5L5_9PROT2.430e-4282.0230S ribosomal protein S15 n=3 Tax=Oceanibaculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..49
NoneNo IPR availableGENE3D6.10.250.3130coord: 55..89
e-value: 4.7E-17
score: 63.0
NoneNo IPR availableGENE3D1.10.287.10coord: 1..53
e-value: 3.7E-25
score: 89.7
NoneNo IPR availablePANTHERPTHR23321:SF2637S RIBOSOMAL PROTEIN S28, MITOCHONDRIALcoord: 4..88
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 8..88
e-value: 1.2E-52
score: 190.9
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 8..88
e-value: 7.7E-38
score: 128.6
IPR000589Ribosomal protein S15PROSITEPS00362RIBOSOMAL_S15coord: 39..69
IPR000589Ribosomal protein S15CDDcd00353Ribosomal_S15p_S13ecoord: 7..86
e-value: 5.20491E-34
score: 109.9
IPR005290Ribosomal protein S15, bacterial-typeTIGRFAMTIGR00952TIGR00952coord: 4..89
e-value: 1.0E-39
score: 132.7
IPR005290Ribosomal protein S15, bacterial-typePANTHERPTHR23321RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLARcoord: 4..88
IPR005290Ribosomal protein S15, bacterial-typeHAMAPMF_01343_BRibosomal_S15_Bcoord: 3..89
score: 23.444242
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 3..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101771contigL-digitata_M_contig101771:503..772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101771.2.1mRNA_L-digitata_M_contig101771.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig101771 503..772 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig101771.2.1 ID=prot_L-digitata_M_contig101771.2.1|Name=mRNA_L-digitata_M_contig101771.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=90bp
MSITQERKSELIKEYSTGEYDTGSPEVQVAILSERIGNLTEHLKEHKKDF
HSRRGLLMMVGQRRRLLDYLKRKDQSRYEKLIASLGLRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR005290Ribosomal_S15_bac-type
IPR009068S15_NS1_RNA-bd