prot_L-digitata_M_contig10154.3.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10154.3.1
Unique Nameprot_L-digitata_M_contig10154.3.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length60
Homology
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Match: D7FUP7_ECTSI (DNA topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP7_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 8.970e-25
Identity = 45/54 (83.33%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    6 QVHANCGGEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQEFVPSVLMV 59
            +V ANCGGE+FTATGLMVTERNWL +Y+PFERWTGR IPEFFQGQEFVPSVL++
Sbjct:  239 KVLANCGGEDFTATGLMVTERNWLDVYEPFERWTGRNIPEFFQGQEFVPSVLVM 292          
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Match: A0A8H5BSQ3_9AGAR (DNA topoisomerase n=1 Tax=Psilocybe cf. subviscida TaxID=2480587 RepID=A0A8H5BSQ3_9AGAR)

HSP 1 Score: 77.0 bits (188), Expect = 4.970e-15
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 SESWRQ-VHANCGGEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQEFVPSVLMVR 60
            +E W+  V   CGGEEF+ATGL+V ERN+LV+Y  +++WTG T+P+F +GQEF P+V  VR
Sbjct:  413 AEGWQTTVEVVCGGEEFSATGLVVKERNYLVVY-VYDKWTGHTVPDFVEGQEFAPTVCEVR 472          
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Match: A0A835YM61_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM61_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 6.010e-14
Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 0
Query:   13 GEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQEFVPSVLMV 59
            GEEF+A+GLM+TERNWL IY P+ERW+ + IP F  GQEFVP+ LM+
Sbjct:  262 GEEFSASGLMITERNWLEIYHPWERWSDKAIPTFTVGQEFVPTSLML 308          
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Match: A0A067Q4C2_9AGAM (DNA topoisomerase n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067Q4C2_9AGAM)

HSP 1 Score: 73.9 bits (180), Expect = 6.030e-14
Identity = 30/52 (57.69%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    5 RQVHANCGGEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQEFVPSV 56
            R V A CGGEEF+ATGL+V ERN+L++Y P+++W+ + +PEF +GQEF+P+V
Sbjct:  425 RTVDAECGGEEFSATGLVVLERNYLLVY-PYDKWSDKELPEFTEGQEFMPTV 475          
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Match: A0A0C9XCQ7_9AGAR (DNA topoisomerase n=1 Tax=Laccaria amethystina LaAM-08-1 TaxID=1095629 RepID=A0A0C9XCQ7_9AGAR)

HSP 1 Score: 71.6 bits (174), Expect = 3.930e-13
Identity = 30/54 (55.56%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    7 VHANCGGEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQEFVPSVLMVR 60
            V   CGGEEFTATGL+V +RN+L++Y P+++W G T+P F +G+EF PSV  +R
Sbjct:  420 VEVVCGGEEFTATGLIVLQRNYLLVY-PYDKWIGHTVPNFQEGEEFDPSVCELR 472          
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Match: A0A2A9NYR8_9AGAR (DNA topoisomerase n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NYR8_9AGAR)

HSP 1 Score: 70.1 bits (170), Expect = 1.370e-12
Identity = 29/54 (53.70%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    7 VHANCGGEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQEFVPSVLMVR 60
            V   CGGEEF ATGL+V E+N+L++Y P+++W+G  +PEF +G+EF+PSV  +R
Sbjct:  423 VDVVCGGEEFHATGLVVLEKNYLLVY-PYDKWSGHELPEFEEGEEFMPSVCELR 475          
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Match: UPI000444A043 (prokaryotic type I DNA topoisomerase n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444A043)

HSP 1 Score: 68.9 bits (167), Expect = 3.470e-12
Identity = 29/54 (53.70%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    7 VHANCGGEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQEFVPSVLMVR 60
            V   CGGEEF ATGL++ ERN+L +Y P+E+W+G+ +P+F +G EF+PSV  +R
Sbjct:  428 VDVLCGGEEFYATGLIILERNFLNVY-PYEKWSGKELPDFEEGDEFMPSVCELR 480          
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Match: A0A8H6TBL9_9AGAR (DNA topoisomerase n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6TBL9_9AGAR)

HSP 1 Score: 68.9 bits (167), Expect = 3.490e-12
Identity = 29/54 (53.70%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    7 VHANCGGEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQEFVPSVLMVR 60
            V   CGGEEF ATGL+V ++N+L++Y  +E+WTG  +P+F +G+EF PSVL +R
Sbjct:  433 VEVICGGEEFFATGLVVHQKNYLLVYT-YEKWTGNQVPDFAEGEEFQPSVLELR 485          
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Match: A0A165QLH3_9AGAM (DNA topoisomerase n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165QLH3_9AGAM)

HSP 1 Score: 68.9 bits (167), Expect = 3.490e-12
Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    7 VHANCGGEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQEFVPSVLMVR 60
            V   CGGEEF+ATGL+V ERN+L +Y P+++W+   IP+F +GQE +PSV  +R
Sbjct:  428 VEVTCGGEEFSATGLIVLERNYLEVY-PYDKWSSMEIPDFTEGQEIMPSVCEMR 480          
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Match: A0A8H8CPJ7_PSICU (DNA topoisomerase n=1 Tax=Psilocybe cubensis TaxID=181762 RepID=A0A8H8CPJ7_PSICU)

HSP 1 Score: 68.9 bits (167), Expect = 3.490e-12
Identity = 29/61 (47.54%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 SESWRQ-VHANCGGEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQEFVPSVLMVR 60
            +E W+  V   CGGE+F+ATGL+V ERN+L +Y  +++WTG  +P+F +G+EF P+V  +R
Sbjct:  416 AEGWQTTVEVTCGGEDFSATGLVVKERNYLEVY-VYDKWTGHHVPDFREGEEFQPTVCEIR 475          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10154.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUP7_ECTSI8.970e-2583.33DNA topoisomerase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A8H5BSQ3_9AGAR4.970e-1555.74DNA topoisomerase n=1 Tax=Psilocybe cf. subviscida... [more]
A0A835YM61_9STRA6.010e-1465.96DNA topoisomerase (Fragment) n=1 Tax=Tribonema min... [more]
A0A067Q4C2_9AGAM6.030e-1457.69DNA topoisomerase n=1 Tax=Jaapia argillacea MUCL 3... [more]
A0A0C9XCQ7_9AGAR3.930e-1355.56DNA topoisomerase n=1 Tax=Laccaria amethystina LaA... [more]
A0A2A9NYR8_9AGAR1.370e-1253.70DNA topoisomerase n=1 Tax=Amanita thiersii Skay404... [more]
UPI000444A0433.470e-1253.70prokaryotic type I DNA topoisomerase n=1 Tax=Stere... [more]
A0A8H6TBL9_9AGAR3.490e-1253.70DNA topoisomerase n=1 Tax=Mycena indigotica TaxID=... [more]
A0A165QLH3_9AGAM3.490e-1253.70DNA topoisomerase n=1 Tax=Neolentinus lepideus HHB... [more]
A0A8H8CPJ7_PSICU3.490e-1247.54DNA topoisomerase n=1 Tax=Psilocybe cubensis TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013825DNA topoisomerase, type IA, central region, subdomain 2GENE3D2.70.20.10Topoisomerase I, domain 3coord: 2..60
e-value: 1.4E-11
score: 46.6
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 5..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10154contigL-digitata_M_contig10154:9075..9254 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10154.3.1mRNA_L-digitata_M_contig10154.3.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10154 9075..9254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10154.3.1 ID=prot_L-digitata_M_contig10154.3.1|Name=mRNA_L-digitata_M_contig10154.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=60bp
SESWRQVHANCGGEEFTATGLMVTERNWLVIYDPFERWTGRTIPEFFQGQ
EFVPSVLMVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013825Topo_IA_cen_sub2
IPR023405Topo_IA_core_domain