prot_L-digitata_M_contig10154.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-digitata_M_contig10154.2.1
Unique Name	prot_L-digitata_M_contig10154.2.1
Type	polypeptide
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length	185

Homology

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BLAST of mRNA_L-digitata_M_contig10154.2.1 vs. uniprot
Match: D7FSU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU1_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 7.460e-61
Identity = 110/164 (67.07%), Postives = 128/164 (78.05%), Query Frame = 0

Query:    7 RGGILEQRMNHVPTRVTVDFGNSPLVHQHLSLLTRGEAPSVTPIRLKVTREARRTLRPFQEIGLRLAEDKTVRSDAWRAAQAVRMREQRPATADILERVEKRREALLRQHASSKRETRREIVRMRSDAAEDRCIIQAEAAGLFSKGDVHEFSNFLARERGKKQR 170
            RGGI E R+N+V TR  +DFGNSP V  HL +LT G   SVTPIRL+VT EA RTLRPFQE  LRLA D+ +RS+ WRAAQAVR+R +RPAT DIL R+++RRE L+RQH SSKRETR+EI RMR DAAEDR  I+ EAA L SKGDVHEFSNFL + + KK R
Sbjct:  286 RGGIPEHRLNYVATRSAIDFGNSPFVKHHLRVLTGGGKTSVTPIRLQVTGEATRTLRPFQEQSLRLANDRLLRSNTWRAAQAVRVRNERPATVDILTRIDQRREKLMRQHISSKRETRQEISRMRIDAAEDRSSIETEAADLLSKGDVHEFSNFLVKHQAKKYR 449

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig10154.2.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig10154.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FSU1_ECTSI	7.460e-61	67.07	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 102..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..185

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig10154	contig	L-digitata_M_contig10154:1030..7321 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig10154.2.1	mRNA_L-digitata_M_contig10154.2.1	Laminaria digitata LdigPH10_18mv male	mRNA	L-digitata_M_contig10154 1028..7321 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-digitata_M_contig10154.2.1 ID=prot_L-digitata_M_contig10154.2.1|Name=mRNA_L-digitata_M_contig10154.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=185bp
ARRGGGRGGILEQRMNHVPTRVTVDFGNSPLVHQHLSLLTRGEAPSVTPI
RLKVTREARRTLRPFQEIGLRLAEDKTVRSDAWRAAQAVRMREQRPATAD
ILERVEKRREALLRQHASSKRETRREIVRMRSDAAEDRCIIQAEAAGLFS
KGDVHEFSNFLARERGKKQRDNDRDQPAAGGGGGA