prot_L-digitata_M_contig101516.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig101516.1.1
Unique Nameprot_L-digitata_M_contig101516.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length106
Homology
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Match: A0A222E2B0_9RHOB (Cysteine/O-acetylserine efflux protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E2B0_9RHOB)

HSP 1 Score: 176 bits (445), Expect = 5.300e-54
Identity = 98/105 (93.33%), Postives = 100/105 (95.24%), Query Frame = 0
Query:    1 PIGRTKAQGNPPRGAEGTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDALAKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAVAATTLL 105
            PIG TKAQGNPP   EGTL+SLVNPKAYAAMAAVFSGFTLVSGAPLGDAL KTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGR+INMAFAGALLIAVAATTLL
Sbjct:   93 PIGLTKAQGNPPHWTEGTLLSLVNPKAYAAMAAVFSGFTLVSGAPLGDALVKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRVINMAFAGALLIAVAATTLL 197          
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Match: A0A239C111_9RHOB (Threonine/homoserine/homoserine lactone efflux protein n=1 Tax=Antarctobacter heliothermus TaxID=74033 RepID=A0A239C111_9RHOB)

HSP 1 Score: 155 bits (393), Expect = 4.170e-46
Identity = 87/105 (82.86%), Postives = 93/105 (88.57%), Query Frame = 0
Query:    1 PIGRTKAQGNPPRGAEGTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDALAKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAVAATTLL 105
            PIG  KAQG PPR  EG L+SLVNPKAYAAMAA FSGFTLV+GAP+GDAL KTALLMLTILAVNLAWL AGSLLTR VR+PRAGRIIN+ FAGALL+AVAAT LL
Sbjct:   93 PIGLAKAQGQPPRWTEGALLSLVNPKAYAAMAAAFSGFTLVTGAPVGDALVKTALLMLTILAVNLAWLLAGSLLTRIVRNPRAGRIINLTFAGALLVAVAATALL 197          
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Match: A3K999_9RHOB (Uncharacterized protein n=2 Tax=Sagittula TaxID=58842 RepID=A3K999_9RHOB)

HSP 1 Score: 103 bits (256), Expect = 2.060e-25
Identity = 64/105 (60.95%), Postives = 73/105 (69.52%), Query Frame = 0
Query:    1 PIGRTKAQGNPPRGAEGTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDALAKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAVAATTLL 105
            PIG   +   PPR  EG L+S++NPKAYAAMAA+FSGFTL   APL DAL KT L    IL VN AW+  G+LLTR   +PR  R IN  FA ALLI+VAATTLL
Sbjct:   93 PIGPADSGRRPPRWHEGALLSMMNPKAYAAMAALFSGFTL-RPAPLPDALTKTLLAFAVILTVNAAWMVIGTLLTRLAGNPRTARAINYGFAAALLISVAATTLL 196          
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Match: A0A2G9WQM0_9HYPH (Uncharacterized protein n=2 Tax=Pleomorphomonas TaxID=261933 RepID=A0A2G9WQM0_9HYPH)

HSP 1 Score: 93.6 bits (231), Expect = 1.160e-21
Identity = 52/104 (50.00%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    1 PIGRTKAQGNPPRGAEGTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDALAKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAVAATTL 104
            P+G  +A G  P  + G ++SL NPKAY A+AAV S +TL+ G P+ D + K ALL++ I AVN+AWL AGSLL R V +PR GR++N+ FA  L+++V A  L
Sbjct:   93 PMGAAEAPGREPGLSAGVMLSLTNPKAYVAVAAVVSRYTLMPGRPVADEVLKGALLLVLIAAVNVAWLAAGSLLARAVTNPRVGRLVNLGFAALLVVSVLAAFL 196          
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Match: A0A5J6MZA9_9PROT (Threonine transporter RhtB n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6MZA9_9PROT)

HSP 1 Score: 93.6 bits (231), Expect = 1.190e-21
Identity = 57/105 (54.29%), Postives = 70/105 (66.67%), Query Frame = 0
Query:    1 PIGRTKAQGNPPRGAEGTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDALAKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAVAATTLL 105
            P+     QG  P  A G L+SLVNPK YAAMAA+FSGF LV+  P  DA  K  +L+L I  VN+AWL  G+ LTR  R+P A R++N+AFA  LL +VAAT LL
Sbjct:   93 PLTERSHQGRHPSFAAGLLLSLVNPKGYAAMAALFSGFVLVAAHPGADAAVKMLVLLLVIALVNIAWLFVGAALTRLFRNPVANRVVNLAFAILLLASVAATLLL 197          
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Match: A0A095WLM5_9HYPH (Uncharacterized protein n=2 Tax=Rhizobium TaxID=379 RepID=A0A095WLM5_9HYPH)

HSP 1 Score: 92.0 bits (227), Expect = 4.710e-21
Identity = 55/99 (55.56%), Postives = 64/99 (64.65%), Query Frame = 0
Query:    1 PIGRTKAQGNPPRGAEGTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDALAKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAV 99
            PIG   A G  P    G  +SLVNPKAYAAM A+FSGFTL    P  DA  K A+L L I AVNLAWL AG+ LTR  R P A RI+N+ FA  LL+++
Sbjct:   93 PIGEETAAGRAPTFPGGVFLSLVNPKAYAAMGALFSGFTLAVADPATDAFFKIAVLTLVIAAVNLAWLSAGATLTRLFRDPLANRIVNIIFAALLLLSL 191          
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Match: A0A101JVT4_9HYPH (Uncharacterized protein n=1 Tax=Bosea sp. WAO TaxID=406341 RepID=A0A101JVT4_9HYPH)

HSP 1 Score: 91.3 bits (225), Expect = 9.380e-21
Identity = 53/99 (53.54%), Postives = 66/99 (66.67%), Query Frame = 0
Query:    1 PIGRTKAQGNPPRGAEGTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDALAKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAV 99
            P+     +G  P  A G  +SLVNPK YAAMA++FSGF LV GA L DA AKTALL+  + AVN  WL AG+ LTR  R+ RA R IN+ FA  LL+++
Sbjct:   93 PLVEDAGEGKAPSFAAGLTLSLVNPKGYAAMASLFSGFVLVRGAVLSDAAAKTALLLAIVTAVNAIWLLAGAALTRAFRNRRANRAINLVFAALLLVSL 191          
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Match: A0A1Y6CPJ9_9HYPH (Threonine/homoserine/homoserine lactone efflux protein n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6CPJ9_9HYPH)

HSP 1 Score: 90.9 bits (224), Expect = 1.350e-20
Identity = 56/99 (56.57%), Postives = 64/99 (64.65%), Query Frame = 0
Query:    1 PIGRTKAQGNPPRGAEGTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDALAKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAV 99
            P+    A    P  A G  + LVNPKAYAAMAA+FSGF LV G P  DALAK  LL   I+AVNLAWL AG+ LTR  R PR  R IN+ FA  LL++V
Sbjct:   94 PLDDETASRRRPSFAGGVFLQLVNPKAYAAMAALFSGFVLVGGQPALDALAKIGLLAAIIVAVNLAWLNAGAALTRCFRDPRTNRAINLGFAVLLLVSV 192          
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Match: A0A346R029_9HYPH (LysE family translocator n=1 Tax=Breoghania sp. L-A4 TaxID=2304600 RepID=A0A346R029_9HYPH)

HSP 1 Score: 90.1 bits (222), Expect = 2.630e-20
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0
Query:   17 GTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDALAKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAVAATTLL 105
            G  VSLVNPKAYAAMAA+FSGF L+   P+ D + K  +L L I+ VN+ WL AG+ +TR +RSPRA RI+N+ FA  LL++V A+ LL
Sbjct:  109 GAFVSLVNPKAYAAMAALFSGFALIGAHPVWDVVLKIGVLALIIMLVNIVWLHAGAAMTRFLRSPRASRIVNVTFAVLLLVSVGASLLL 197          
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Match: A0A4R3E4R7_9HYPH (Threonine/homoserine/homoserine lactone efflux protein n=1 Tax=Bosea sp. BK604 TaxID=2512180 RepID=A0A4R3E4R7_9HYPH)

HSP 1 Score: 89.4 bits (220), Expect = 5.240e-20
Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:    1 PIGRTKAQGNPPRGAEGTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDALAKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAVA 100
            P+     +G  P  A G L+SLVNPK YAAMAA+FSGF L+ GA   DALAK  +LM  I AVNL WL  G+ LTR  R PR  RI+N+ FA  L+ +VA
Sbjct:   93 PLTDASERGARPSFAAGALLSLVNPKGYAAMAALFSGFVLLRGALASDALAKAGVLMAIIAAVNLLWLVTGAALTRFFREPRTNRIVNIVFAILLIASVA 192          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101516.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E2B0_9RHOB5.300e-5493.33Cysteine/O-acetylserine efflux protein n=2 Tax=Ros... [more]
A0A239C111_9RHOB4.170e-4682.86Threonine/homoserine/homoserine lactone efflux pro... [more]
A3K999_9RHOB2.060e-2560.95Uncharacterized protein n=2 Tax=Sagittula TaxID=58... [more]
A0A2G9WQM0_9HYPH1.160e-2150.00Uncharacterized protein n=2 Tax=Pleomorphomonas Ta... [more]
A0A5J6MZA9_9PROT1.190e-2154.29Threonine transporter RhtB n=1 Tax=Hypericibacter ... [more]
A0A095WLM5_9HYPH4.710e-2155.56Uncharacterized protein n=2 Tax=Rhizobium TaxID=37... [more]
A0A101JVT4_9HYPH9.380e-2153.54Uncharacterized protein n=1 Tax=Bosea sp. WAO TaxI... [more]
A0A1Y6CPJ9_9HYPH1.350e-2056.57Threonine/homoserine/homoserine lactone efflux pro... [more]
A0A346R029_9HYPH2.630e-2056.18LysE family translocator n=1 Tax=Breoghania sp. L-... [more]
A0A4R3E4R7_9HYPH5.240e-2054.00Threonine/homoserine/homoserine lactone efflux pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001123Amino acid exporter protein, LeuE-typePFAMPF01810LysEcoord: 16..102
e-value: 2.0E-7
score: 30.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101516contigL-digitata_M_contig101516:5..322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101516.1.1mRNA_L-digitata_M_contig101516.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig101516 5..322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig101516.1.1 ID=prot_L-digitata_M_contig101516.1.1|Name=mRNA_L-digitata_M_contig101516.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=106bp
PIGRTKAQGNPPRGAEGTLVSLVNPKAYAAMAAVFSGFTLVSGAPLGDAL
AKTALLMLTILAVNLAWLCAGSLLTRTVRSPRAGRIINMAFAGALLIAVA
ATTLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001123LeuE-type