prot_L-digitata_M_contig101362.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig101362.1.1
Unique Nameprot_L-digitata_M_contig101362.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length308
Homology
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Match: A0A6L9ZQG5_9CYAN (WD40 repeat domain-containing protein n=1 Tax=Okeania sp. SIO3B5 TaxID=2607811 RepID=A0A6L9ZQG5_9CYAN)

HSP 1 Score: 65.9 bits (159), Expect = 2.010e-8
Identity = 26/59 (44.07%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    5 VWLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSDRTLKLWDIRTGAQ 63
            VWL P+K +L  PG SL++  +GH D++  + +  +G++ IS SSD+T+K+W I TGA+
Sbjct:  127 VWLYPLKTSLTTPGGSLIRILEGHSDMVRTLAVTPDGKLVISGSSDKTIKVWCIETGAE 185          
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Match: UPI001688C1F1 (tetratricopeptide repeat protein n=1 Tax=unclassified Planktothricoides TaxID=2621081 RepID=UPI001688C1F1)

HSP 1 Score: 66.2 bits (160), Expect = 2.270e-8
Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = 0
Query:    1 KPEPVWLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSDRTLKLWDIRTGAQ 63
            K E  W  P+  NL  PG  L++   GH D ++A+ I  +G+ A+S SSD+TLKLWD+ TG++
Sbjct:  127 KQEKPWFRPLAANLTPPGGPLIRTLTGHSDSVNAVAITPDGKQAVSGSSDKTLKLWDLATGSE 189          
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Match: A0A6P0XNU5_9CYAN (Bulb-type lectin domain-containing protein (Fragment) n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0XNU5_9CYAN)

HSP 1 Score: 64.3 bits (155), Expect = 7.280e-8
Identity = 24/59 (40.68%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    5 VWLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSDRTLKLWDIRTGAQ 63
            VWL P+K +L  PG  L++  +GH D++  + +  +G++ IS SSD+T+K+W + TGA+
Sbjct:  136 VWLHPLKSSLTTPGGPLIRILEGHSDMVRTLAVTPDGKLVISGSSDKTIKVWSLETGAE 194          
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Match: UPI001686C527 (hypothetical protein n=1 Tax=Calothrix sp. FACHB-1219 TaxID=2692778 RepID=UPI001686C527)

HSP 1 Score: 63.9 bits (154), Expect = 9.170e-8
Identity = 27/58 (46.55%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    6 WLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSDRTLKLWDIRTGAQ 63
            WL P+  +L  PG  L++   GH D + AI + A+GQ  IS SSD TLK+W+++TGA+
Sbjct:  132 WLRPVTPSLTPPGGRLIRTLSGHSDSVRAIAVTADGQRVISGSSDNTLKIWNLQTGAK 189          
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Match: UPI00187EE546 (WD40 repeat domain-containing protein n=1 Tax=Tychonema sp. LEGE 06208 TaxID=1828663 RepID=UPI00187EE546)

HSP 1 Score: 63.9 bits (154), Expect = 1.220e-7
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    6 WLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSDRTLKLWDIRTGAQ 63
            WL P+K NL+ PG   L+   GH + + A+ I  +G+ AISAS D+TLK+WD  TG +
Sbjct:  169 WLRPLKANLERPGEGALRTLAGHSEAVRAVAIAPDGKTAISASWDKTLKIWDTETGRE 226          
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Match: A0A524QCC1_9EURY (TIR domain-containing protein n=1 Tax=ANME-2 cluster archaeon TaxID=2056317 RepID=A0A524QCC1_9EURY)

HSP 1 Score: 63.9 bits (154), Expect = 1.370e-7
Identity = 26/59 (44.07%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    5 VWLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSDRTLKLWDIRTGAQ 63
            +WL P+K +L  PG  L++ ++GH   +  + +  +G+ AISASSD+TL++WDI TG Q
Sbjct:  656 IWLRPLKTSLTPPGGPLIRTFEGHTHAVKGVAVMPDGKHAISASSDKTLRIWDIDTGKQ 714          
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Match: A0A3D3LB82_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3D3LB82_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 1.400e-7
Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    6 WLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSDRTLKLWDIRTGAQ 63
            WLDP+K NL IP   LL   +GH   + A+ +  +G+ A+S S+DRTL++WDI +G +
Sbjct:  727 WLDPLKTNLHIPDGDLLLTLEGHSAEVEAVAVTPDGRWAVSGSTDRTLRVWDIDSGQE 784          
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Match: A0A2D0HHU0_9NOSO (Uncharacterized protein (Fragment) n=1 Tax=Nostoc sp. 'Peltigera malacea cyanobiont' DB3992 TaxID=1206980 RepID=A0A2D0HHU0_9NOSO)

HSP 1 Score: 61.2 bits (147), Expect = 1.840e-7
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    6 WLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSDRTLKLWDIRTG 61
            WL P+  NL  PG SLL    GH D ++AI +  +G+  ISAS D+TLKLW++ TG
Sbjct:  137 WLRPLTSNLISPGGSLLLTLAGHSDWVNAIVLTLDGKRVISASDDKTLKLWNLETG 192          
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Match: UPI001F602C53 (hypothetical protein n=1 Tax=Microcoleus vaginatus TaxID=119532 RepID=UPI001F602C53)

HSP 1 Score: 63.2 bits (152), Expect = 2.150e-7
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    5 VWLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSDRTLKLWDIRTGAQ 63
            +WL P+K NL+ PG   L+   GH   + A+ I  +G+ AISAS D+TLK+WD  TG +
Sbjct:  132 LWLRPLKANLERPGEGCLRTLSGHTHSVFAVAIAPDGKRAISASEDKTLKIWDTETGTE 190          
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Match: G7WPS4_METH6 (WD repeat protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) TaxID=1110509 RepID=G7WPS4_METH6)

HSP 1 Score: 63.2 bits (152), Expect = 2.450e-7
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    6 WLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSDRTLKLWDIRTGAQ 63
            W+ P+  NL  PG  LL+  KGH D + A+ +  +G+ A+SAS DRTLK+WD+  G +
Sbjct:  632 WIRPMTPNLTPPGGPLLRILKGHSDSVRAVAVTPDGRRAVSASGDRTLKVWDLERGEE 689          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101362.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L9ZQG5_9CYAN2.010e-844.07WD40 repeat domain-containing protein n=1 Tax=Okea... [more]
UPI001688C1F12.270e-844.44tetratricopeptide repeat protein n=1 Tax=unclassif... [more]
A0A6P0XNU5_9CYAN7.280e-840.68Bulb-type lectin domain-containing protein (Fragme... [more]
UPI001686C5279.170e-846.55hypothetical protein n=1 Tax=Calothrix sp. FACHB-1... [more]
UPI00187EE5461.220e-746.55WD40 repeat domain-containing protein n=1 Tax=Tych... [more]
A0A524QCC1_9EURY1.370e-744.07TIR domain-containing protein n=1 Tax=ANME-2 clust... [more]
A0A3D3LB82_9BACT1.400e-744.83Uncharacterized protein n=1 Tax=Verrucomicrobiales... [more]
A0A2D0HHU0_9NOSO1.840e-750.00Uncharacterized protein (Fragment) n=1 Tax=Nostoc ... [more]
UPI001F602C532.150e-745.76hypothetical protein n=1 Tax=Microcoleus vaginatus... [more]
G7WPS4_METH62.450e-744.83WD repeat protein n=1 Tax=Methanosaeta harundinace... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 86..100
score: 36.13
coord: 44..58
score: 38.79
coord: 212..226
score: 36.59
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 60..99
e-value: 6.4E-8
score: 42.3
coord: 186..225
e-value: 1.8E-8
score: 44.2
coord: 228..267
e-value: 1.2E-8
score: 44.7
coord: 18..57
e-value: 2.4E-6
score: 37.1
coord: 102..141
e-value: 0.042
score: 23.0
coord: 270..308
e-value: 1.8E-4
score: 30.9
coord: 144..183
e-value: 1.6
score: 15.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 230..267
e-value: 1.8E-5
score: 25.4
coord: 62..99
e-value: 2.2E-7
score: 31.4
coord: 21..57
e-value: 8.8E-6
score: 26.4
coord: 193..225
e-value: 8.9E-6
score: 26.4
coord: 271..308
e-value: 8.0E-7
score: 29.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 25..66
score: 15.287253
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 277..308
score: 14.719144
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 67..108
score: 16.156128
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 193..234
score: 15.287253
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 235..276
score: 16.022453
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 11..193
e-value: 2.8E-42
score: 146.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 194..308
e-value: 2.0E-40
score: 140.8
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 157..308
coord: 23..150
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 67..103
score: 12.103769
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 193..226
score: 11.89286
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 277..308
score: 13.47467
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 235..272
score: 12.024679
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 25..61
score: 11.444681
NoneNo IPR availableCDDcd00200WD40coord: 21..308
e-value: 2.35785E-75
score: 230.685
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 212..226
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 44..58
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 254..268
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 86..100
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 16..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101362contigL-digitata_M_contig101362:3..926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101362.1.1mRNA_L-digitata_M_contig101362.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig101362 3..926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig101362.1.1 ID=prot_L-digitata_M_contig101362.1.1|Name=mRNA_L-digitata_M_contig101362.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=308bp
KPEPVWLDPIKVNLDIPGSSLLQAYKGHGDVIHAIDIDAEGQMAISASSD
RTLKLWDIRTGAQLRTFRGHHDLVHTVAFTQNGKFAISGSDDLSLKVWDI
EKGTNLRTYALHSDKILSIVPLGDNKRVLSSDESGKLFLWDLWSGEIIKD
MESPINRIWSIAVTPENHMAFTAGDDHTIGCVSLKDGSSPLRLTAHDDWI
WSLKVTPDGRHLISASEDQSIIVWDLFTGQVARVLSGHQAGVRAIDLSKD
GKTLVSASEDQSMIVWDFEQGKILRTFTGHDDWVWDMAITPDGKGVLSAS
DDSSLKLW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf