prot_L-digitata_M_contig101325.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig101325.1.1
Unique Nameprot_L-digitata_M_contig101325.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length71
Homology
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Match: Q9SMD8_9PHAE (Glycolate oxidase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD8_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 2.700e-37
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    2 QDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGGNDS 71
            +DRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGGNDS
Sbjct:    2 KDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGGNDS 71          
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Match: D8LDI6_ECTSI (Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI6_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.210e-33
Identity = 66/70 (94.29%), Postives = 67/70 (95.71%), Query Frame = 0
Query:    2 QDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGGNDS 71
            +DR IT QLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNF SAGGAHASGTKDGGNDS
Sbjct:  157 KDRKITEQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHASGTKDGGNDS 226          
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Match: A0A836CMB2_9STRA (Glycolate oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB2_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.210e-28
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    2 QDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGGNDS 71
            +DR +TA+LVKRA A+GYTALAVTVDTPVLGRREAD+RNRFKLP HLTMGNF  AGGAHA GTKDGG DS
Sbjct:  159 KDRKLTAELVKRAEASGYTALAVTVDTPVLGRREADVRNRFKLPVHLTMGNFIGAGGAHAEGTKDGGKDS 228          
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Match: A0A7S2V919_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V919_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.230e-27
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    2 QDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGGNDS 71
            +DRV+T  LV+RA AAGY ALAVTVDTPVLGRREAD+RNRFKLP HLTMGNF   GG+HA GTKDGG DS
Sbjct:  102 KDRVVTLDLVRRAEAAGYKALAVTVDTPVLGRREADVRNRFKLPPHLTMGNFVGKGGSHAEGTKDGGKDS 171          
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Match: A0A6V1QYU9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QYU9_HETAK)

HSP 1 Score: 108 bits (270), Expect = 1.590e-26
Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    2 QDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGGNDS 71
            +DR +   LV+RA AAGY A AVTVDTPVLGRREAD+RNRFKLP HLTMGNFAS GGAHASGTKDGG DS
Sbjct:  158 KDRDVVLDLVRRAEAAGYKAFAVTVDTPVLGRREADVRNRFKLPTHLTMGNFASKGGAHASGTKDGGKDS 227          
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Match: W7UBQ6_9STRA (Peroxisomal glycolate oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBQ6_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.120e-25
Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    2 QDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGGNDS 71
            +DR +TA+L +RA  AGY ALA+TVDTPVLGRREAD+RNRFKLP HLTM NFA AGG+HA GTKDGG DS
Sbjct:  154 KDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDS 223          
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Match: A0A7S2FX59_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FX59_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.040e-23
Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = 0
Query:    2 QDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTK 65
            +DR +T  L+KRA AAGY ALAVTVDTPVLGRREAD+RN+F LP HLTMGNFA+ GG HASGTK
Sbjct:  119 KDREVTLDLIKRAEAAGYKALAVTVDTPVLGRREADVRNKFSLPAHLTMGNFANTGGDHASGTK 182          
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Match: A0A7R9UGG8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 4.410e-22
Identity = 49/67 (73.13%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    2 QDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGG 68
            +DR +T  LV+RA   GY ALAVTVDTPVLGRREAD+RNRF LP HLTMGNFA  GGAH+SGTK  G
Sbjct:  156 KDRDVTLDLVRRAERNGYKALAVTVDTPVLGRREADVRNRFSLPSHLTMGNFAGVGGAHSSGTKSSG 222          
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Match: A0A7S1UI71_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI71_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.180e-22
Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    2 QDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGAHASGTKDGG 68
            +DR +T  L++RA  AGY A AVTVDTP+LGRREAD+RNRF LP HLTMGNFA+ GG H+SGTKD G
Sbjct:  157 KDREVTMDLIRRAERAGYLAFAVTVDTPLLGRREADVRNRFSLPSHLTMGNFANKGGDHSSGTKDAG 223          
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Match: A0A7S4KCV1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCV1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.290e-19
Identity = 49/72 (68.06%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    2 QDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFASAGGA--HASGTKDGGNDS 71
            +DR ITA LV+RA  AGY ALAVTVDTP LGRRE D+RNRFKLP HLTM NF    G   H++G K GGNDS
Sbjct:  161 KDRGITADLVRRAERAGYRALAVTVDTPCLGRREPDVRNRFKLPSHLTMKNFVEMSGDNDHSNGVKKGGNDS 232          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101325.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q9SMD8_9PHAE2.700e-3798.57Glycolate oxidase (Fragment) n=1 Tax=Laminaria dig... [more]
D8LDI6_ECTSI1.210e-3394.29Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A836CMB2_9STRA2.210e-2882.86Glycolate oxidase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2V919_9STRA5.230e-2778.57Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1QYU9_HETAK1.590e-2680.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
W7UBQ6_9STRA1.120e-2575.71Peroxisomal glycolate oxidase n=2 Tax=Monodopsidac... [more]
A0A7S2FX59_9STRA3.040e-2376.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9UGG8_9STRA4.410e-2273.13Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UI71_9STRA6.180e-2270.15Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4KCV1_9STRA4.290e-1968.06Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..71
e-value: 1.2E-18
score: 69.0
IPR000262FMN-dependent dehydrogenasePFAMPF01070FMN_dhcoord: 2..61
e-value: 1.9E-14
score: 53.4
NoneNo IPR availablePIRSRPIRSR000138-2PIRSR000138-2coord: 2..58
e-value: 1.1E-15
score: 55.2
NoneNo IPR availablePANTHERPTHR10578S -2-HYDROXY-ACID OXIDASE-RELATEDcoord: 2..68
NoneNo IPR availablePANTHERPTHR10578:SF70PEROXISOMAL (S)-2-HYDROXY-ACID OXIDASE GLO3coord: 2..68
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 3..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101325contigL-digitata_M_contig101325:104..316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101325.1.1mRNA_L-digitata_M_contig101325.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig101325 104..316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig101325.1.1 ID=prot_L-digitata_M_contig101325.1.1|Name=mRNA_L-digitata_M_contig101325.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=71bp
LQDRVITAQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTM
GNFASAGGAHASGTKDGGNDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR000262FMN-dep_DH