prot_L-digitata_M_contig10132.6.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10132.6.1
Unique Nameprot_L-digitata_M_contig10132.6.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length45
Homology
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Match: D7G4C9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C9_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 3.550e-19
Identity = 37/42 (88.10%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    4 RVVWLSSEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQV 45
            RVVWLSSED SKAFDFDV YICLHAISKDP TFP PCIYCQ+
Sbjct:   60 RVVWLSSEDQSKAFDFDVAYICLHAISKDPGTFPNPCIYCQL 101          
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Match: A0A812X7B4_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X7B4_SYMMI)

HSP 1 Score: 63.2 bits (152), Expect = 1.230e-11
Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    3 RRVVWLSSEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQV 45
            RRV+W S E    A+DFDVPYI LHA++ DP++FP PC+YCQ+
Sbjct:   31 RRVIWASEE---LAYDFDVPYIVLHAVTHDPSSFPRPCLYCQL 70          
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Match: A0A7S3HJ42_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ42_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 7.890e-10
Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    3 RRVVWLSSEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQV 45
            +RV+WL   +   A+DFDVPYI LHAI++DP ++P PCIYCQ+
Sbjct:   60 KRVLWLGVGES--AYDFDVPYIALHAITRDPDSYPKPCIYCQL 100          
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Match: UPI00098E822A (chloride conductance regulatory protein ICln-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E822A)

HSP 1 Score: 60.1 bits (144), Expect = 8.950e-10
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    3 RRVVWLSSEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQV 45
            RRV+WLS ED SK +  D   I LHA+S+DP T+P+PCIY ++
Sbjct:   27 RRVIWLSDEDKSKGYAVDFSSISLHAVSRDPETYPSPCIYARI 69          
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Match: F0WL16_9STRA (Uncharacterized protein AlNc14C139G7205 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL16_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.450e-9
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    3 RRVVWLS--SEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQV 45
            RR +W+S  S D S+ + +D+  I LHAIS+DPA FP PC+YCQ+
Sbjct:   66 RRAIWISNTSSDTSRGYSWDIKCITLHAISRDPAAFPVPCLYCQI 110          
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Match: A0A2I0WCX7_9ASPA (Chloride conductance regulatory protein ICln n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WCX7_9ASPA)

HSP 1 Score: 55.8 bits (133), Expect = 1.360e-8
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    3 RRVVWLSSEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQ 44
            RRV+WLS  D  K +  D   I LHA+S+DP T+P+PCIY Q
Sbjct:   56 RRVIWLSDTDRDKCYSVDFLSISLHAVSRDPETYPSPCIYTQ 97          
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Match: UPI00109FFC37 (chloride conductance regulatory protein ICln n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI00109FFC37)

HSP 1 Score: 57.0 bits (136), Expect = 1.560e-8
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    3 RRVVWLSSEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQV 45
            RRV+WLS  D  K +  D   I LHA+S+DP T+P+PCIY Q+
Sbjct:   56 RRVIWLSDTDRDKCYSVDFLSISLHAVSRDPETYPSPCIYTQI 98          
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Match: A0A8J5I5W5_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5I5W5_ZINOF)

HSP 1 Score: 55.1 bits (131), Expect = 1.670e-8
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    3 RRVVWLSSEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQV 45
            RRV+WLS  D  K +  D   + LHA+S+DP T+P PCIY QV
Sbjct:   67 RRVIWLSDADKGKGYAVDFLSLSLHAVSRDPETYPFPCIYTQV 109          
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Match: A0A484LMB5_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LMB5_9ASTE)

HSP 1 Score: 54.3 bits (129), Expect = 2.810e-8
Identity = 22/42 (52.38%), Postives = 29/42 (69.05%), Query Frame = 0
Query:    3 RRVVWLSSEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQ 44
            R+VVWLS  D  K +  D  +I LHA+S+DP  +P+PCIY Q
Sbjct:   53 RQVVWLSDTDKEKGYAVDFCHISLHAVSRDPEAYPSPCIYAQ 94          
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Match: UPI00098E569D (uncharacterized protein LOC109825422 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E569D)

HSP 1 Score: 57.0 bits (136), Expect = 2.910e-8
Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    3 RRVVWLSSEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQV 45
            +RV+WL  ED SK +  D   I LHA+S+DP T+P+PCIY ++
Sbjct:  295 KRVIWLRDEDKSKGYAVDFSSISLHAVSRDPETYPSPCIYARI 337          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10132.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4C9_ECTSI3.550e-1988.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A812X7B4_SYMMI1.230e-1160.47Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S3HJ42_9STRA7.890e-1058.14Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UPI00098E822A8.950e-1055.81chloride conductance regulatory protein ICln-like ... [more]
F0WL16_9STRA1.450e-953.33Uncharacterized protein AlNc14C139G7205 n=1 Tax=Al... [more]
A0A2I0WCX7_9ASPA1.360e-854.76Chloride conductance regulatory protein ICln n=1 T... [more]
UPI00109FFC371.560e-853.49chloride conductance regulatory protein ICln n=1 T... [more]
A0A8J5I5W5_ZINOF1.670e-853.49Uncharacterized protein n=1 Tax=Zingiber officinal... [more]
A0A484LMB5_9ASTE2.810e-852.38Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
UPI00098E569D2.910e-851.16uncharacterized protein LOC109825422 n=1 Tax=Aspar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039924Protein ICln/Lot5/Saf5PFAMPF03517Voldacscoord: 3..45
e-value: 3.2E-8
score: 33.8
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..45
e-value: 4.4E-13
score: 51.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10132contigL-digitata_M_contig10132:8805..8939 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10132.6.1mRNA_L-digitata_M_contig10132.6.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10132 8805..8939 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10132.6.1 ID=prot_L-digitata_M_contig10132.6.1|Name=mRNA_L-digitata_M_contig10132.6.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=45bp
MRRRVVWLSSEDDSKAFDFDVPYICLHAISKDPATFPTPCIYCQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039924ICln/Lot5/Saf5
IPR011993PH-like_dom_sf