prot_L-digitata_M_contig10130.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10130.1.1
Unique Nameprot_L-digitata_M_contig10130.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length153
Homology
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Match: D7G6A7_ECTSI (Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A7_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 5.240e-81
Identity = 116/145 (80.00%), Postives = 133/145 (91.72%), Query Frame = 0
Query:    8 QVTLYEEFSKFADRTAVAQDVIFEITSMDHFDDVVSRAAGADEASLDGYEDAQGNLRIPHKLLMVEIHAGWCRVCKGLQPKLLKLVTQHPEVLCCKINKTRNEELAGKLGVRGLPMIIFYKKGKRIDHFTTANINTIEEGIRDNS 152
            +VTLYEEFS++ADR +VAQ+VIFEITS +HF+DVVSRAAGADE   +GYEDAQGN R+PHKL+MV+IHAGWCRVCKGLQPKLLKL+T+HPEVLCCKINK  +EELA KLGVRGLPM+IFYK GKR+DH TTANINTIEE IRDN+
Sbjct:   24 KVTLYEEFSRYADRRSVAQEVIFEITSAEHFEDVVSRAAGADEH--EGYEDAQGNWRVPHKLMMVQIHAGWCRVCKGLQPKLLKLITKHPEVLCCKINKAHHEELAAKLGVRGLPMLIFYKNGKRVDHHTTANINTIEEAIRDNT 166          
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Match: A0A835Z3K6_9STRA (Thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K6_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.370e-53
Identity = 78/141 (55.32%), Postives = 105/141 (74.47%), Query Frame = 0
Query:   11 LYEEFSKFADRTAVAQDVIFEITSMDHFDDVVSRAAGADEASLDGYEDAQGNLRIPHKLLMVEIHAGWCRVCKGLQPKLLKLVTQHPEVLCCKINKTRNEELAGKLGVRGLPMIIFYKKGKRIDHFTTANINTIEEGIRDN 151
            +YEE SK+AD  AVA D + EITS +H D +++ AA  +     GY D  GN R+PH+L+M+++HA WCR C G++PKLLKL  +HPEVLCCK+NK  +E++A +LG+R LP  + YK GKRIDHFTTA+I TIE+G+ DN
Sbjct:    1 MYEESSKYADPHAVATDCVVEITSNEHLDRILATAAQVENPDA-GYVDHHGNQRLPHRLIMIQVHANWCRACIGVRPKLLKLCARHPEVLCCKLNKGNHEDVAARLGIRALPTFVLYKNGKRIDHFTTADIETIEQGVLDN 140          
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Match: A0A7R9U8D8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8D8_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.760e-36
Identity = 64/140 (45.71%), Postives = 88/140 (62.86%), Query Frame = 0
Query:   12 YEEFSKFADRTAVAQDVIFEITSMDHFDDVVSRAAGADEASLDGYEDAQGNLRIPHKLLMVEIHAGWCRVCKGLQPKLLKLVTQHPEVLCCKINKTRNEELAGKLGVRGLPMIIFYKKGKRIDHFTTANINTIEEGIRDN 151
            YEE S +AD TA A + + ++TS + FD ++S AAGA+  S D         + PHK++M+ +HA WCR CK L  + LK+   HPEVLC K+N   N E+   LG+RG+P+ I YK GKRIDHF   N + +EE + DN
Sbjct:   75 YEECSFYADATACAMETLIDVTSQEQFDFIISHAAGANPLSPD---------QKPHKMVMLMVHATWCRKCKYLMKQYLKVAKAHPEVLCLKLNLATNAEVGKSLGIRGVPLFIIYKAGKRIDHFYAENADDLEEQVEDN 205          
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Match: A0A061S1S4_9CHLO (Thioredoxin-like chloroplastic-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S1S4_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 3.000e-9
Identity = 28/73 (38.36%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   68 KLLMVEIHAGWCRVCKGLQPKLLKLVTQHPEVLCCKINKTRNEELAGKLGVRGLPMIIFYKKGK-RIDHFTTA 139
            +L++V+ +A WC  C+GL P+L KL+ +HP+V   K+    N  L   LGV+ LP   FY+  + R+D F+ +
Sbjct:   99 RLVIVDFYATWCHACRGLYPRLSKLMEEHPDVKLLKVEFESNRSLCKSLGVKVLPFFHFYRGNEGRLDAFSAS 171          
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Match: A0A093BLW0_CHAPE (Thioredoxin (Fragment) n=2 Tax=Chaetura pelagica TaxID=8897 RepID=A0A093BLW0_CHAPE)

HSP 1 Score: 58.2 bits (139), Expect = 2.700e-8
Identity = 27/82 (32.93%), Postives = 48/82 (58.54%), Query Frame = 0
Query:   68 KLLMVEIHAGWCRVCKGLQPKLLKLVTQHPEVLCCKINKTRNEELAGKLGVRGLPMIIFYKKGKRIDHFTTANINTIEEGIR 149
            KL++V+  A WC  CK ++P    LV ++ +V+  +I+    +++A    V+ +P   FYK GK++  F+ AN   +EE I+
Sbjct:   12 KLIVVDFSATWCGPCKMIKPFFHSLVEKYGDVVFIEIDVDDAQDVASHCDVKCMPTFQFYKNGKKVQEFSGANKEKLEETIK 93          
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Match: A0A7C5YP98_9CHLR (Thioredoxin n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5YP98_9CHLR)

HSP 1 Score: 58.2 bits (139), Expect = 3.250e-8
Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 0
Query:   70 LMVEIHAGWCRVCKGLQPKLLKLVTQHP-EVLCCKINKTRNEELAGKLGVRGLPMIIFYKKGKRIDHFTTA 139
            +MV+  A WC  C+ + P + +L  ++   VL  K+N   ++E AG+LG+RG+P +IF+K G  +D    A
Sbjct:   20 VMVDFWAPWCGPCRMVAPFVEELAREYAGRVLVAKVNTDEHQEWAGRLGIRGIPTLIFFKNGVEVDRIVGA 90          
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Match: UPI001CF9EFDD (thioredoxin-like n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF9EFDD)

HSP 1 Score: 58.2 bits (139), Expect = 3.330e-8
Identity = 27/81 (33.33%), Postives = 47/81 (58.02%), Query Frame = 0
Query:   68 KLLMVEIHAGWCRVCKGLQPKLLKLVTQHPEVLCCKINKTRNEELAGKLGVRGLPMIIFYKKGKRIDHFTTANINTIEEGI 148
            KL++ +  A WC  CK + P   ++  ++ +VL  K++    EE+A    VR +P  IF+K G+++D F+ AN   ++E I
Sbjct:   21 KLVVADFTATWCGPCKMIAPIFEEMAGKYEDVLFLKVDIDEAEEVANCHNVRSVPTFIFFKNGQKVDDFSGANKEKLQEFI 101          
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Match: UPI001FAC86D3 (thioredoxin n=1 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAC86D3)

HSP 1 Score: 58.2 bits (139), Expect = 3.480e-8
Identity = 26/85 (30.59%), Postives = 50/85 (58.82%), Query Frame = 0
Query:   68 KLLMVEIHAGWCRVCKGLQPKLLKLVTQ--HPEVLCCKINKTRNEELAGKLGVRGLPMIIFYKKGKRIDHFTTANINTIEEGIRD 150
            KL++V+  A WC  CK + P  ++L  Q  + EV+  K++    ++++   G++ +P   FYK GK +  F+ AN+ T+E  +++
Sbjct:   21 KLVVVDFTATWCGPCKQIGPHFVRLSEQSENKEVIFLKVDVDDADDVSSNCGIKCMPTFHFYKNGKMVFEFSGANLETLENKLKE 105          
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Match: A0A510BAW3_9EURY (Thiol reductase thioredoxin n=1 Tax=Methanofervidicoccus sp. A16 TaxID=2607662 RepID=A0A510BAW3_9EURY)

HSP 1 Score: 58.5 bits (140), Expect = 3.540e-8
Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 0
Query:   62 NLRIPHKLLMVEIHAGWCRVCKGLQPKLLKLVTQHPEVLCCKINKTRNEELAGKLGVRGLPMIIFYKKG 130
            +L +  K  +V  HA WC+ CK L+P L +L  +  EV+   +++ R  ELA KLG+RGLP +I+ K G
Sbjct:   34 DLNLEGKTAIVVFHADWCKYCKDLEPTLNQLEKEGVEVIRIDVDERR--ELAEKLGIRGLPTVIYVKDG 100          
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Match: A0A091VUE2_NIPNI (Thioredoxin (Fragment) n=2 Tax=Nipponia nippon TaxID=128390 RepID=A0A091VUE2_NIPNI)

HSP 1 Score: 57.8 bits (138), Expect = 3.700e-8
Identity = 27/82 (32.93%), Postives = 48/82 (58.54%), Query Frame = 0
Query:   68 KLLMVEIHAGWCRVCKGLQPKLLKLVTQHPEVLCCKINKTRNEELAGKLGVRGLPMIIFYKKGKRIDHFTTANINTIEEGIR 149
            KL++V+  A WC  CK ++P    L  ++ +V+  +I+    +++A    V+ +P   FYKKGK++  F+ AN   +EE I+
Sbjct:   12 KLIVVDFSATWCGPCKMIKPFFHSLCEKYADVVFIEIDVDDAQDVATHCDVKCMPTFQFYKKGKKVQEFSGANKEKLEETIK 93          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10130.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6A7_ECTSI5.240e-8180.00Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A835Z3K6_9STRA2.370e-5355.32Thioredoxin n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7R9U8D8_9STRA2.760e-3645.71Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A061S1S4_9CHLO3.000e-938.36Thioredoxin-like chloroplastic-like n=1 Tax=Tetras... [more]
A0A093BLW0_CHAPE2.700e-832.93Thioredoxin (Fragment) n=2 Tax=Chaetura pelagica T... [more]
A0A7C5YP98_9CHLR3.250e-836.62Thioredoxin n=1 Tax=Anaerolineae bacterium TaxID=2... [more]
UPI001CF9EFDD3.330e-833.33thioredoxin-like n=1 Tax=Protopterus annectens Tax... [more]
UPI001FAC86D33.480e-830.59thioredoxin n=1 Tax=Girardinichthys multiradiatus ... [more]
A0A510BAW3_9EURY3.540e-842.03Thiol reductase thioredoxin n=1 Tax=Methanofervidi... [more]
A0A091VUE2_NIPNI3.700e-832.93Thioredoxin (Fragment) n=2 Tax=Nipponia nippon Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 66..146
e-value: 1.0E-15
score: 57.5
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 42..152
score: 9.271997
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 17..152
e-value: 5.4E-22
score: 79.8
NoneNo IPR availablePIRSRPIRSR037293-1PIRSR037293-1coord: 71..144
e-value: 0.0031
score: 13.5
NoneNo IPR availablePIRSRPIRSR000077-4PIRSR000077-4coord: 67..138
e-value: 2.9E-9
score: 34.8
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 66..149
NoneNo IPR availablePANTHERPTHR10438:SF436THIOREDOXIN-1-RELATEDcoord: 66..149
NoneNo IPR availableCDDcd02947TRX_familycoord: 67..140
e-value: 3.73224E-19
score: 74.902
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 27..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10130contigL-digitata_M_contig10130:2179..3628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10130.1.1mRNA_L-digitata_M_contig10130.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10130 2179..3628 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10130.1.1 ID=prot_L-digitata_M_contig10130.1.1|Name=mRNA_L-digitata_M_contig10130.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=153bp
MFLVTRPQVTLYEEFSKFADRTAVAQDVIFEITSMDHFDDVVSRAAGADE
ASLDGYEDAQGNLRIPHKLLMVEIHAGWCRVCKGLQPKLLKLVTQHPEVL
CCKINKTRNEELAGKLGVRGLPMIIFYKKGKRIDHFTTANINTIEEGIRD
NS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf