prot_L-digitata_M_contig101287.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig101287.1.1
Unique Nameprot_L-digitata_M_contig101287.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length76
Homology
BLAST of mRNA_L-digitata_M_contig101287.1.1 vs. uniprot
Match: A0A2N5MDY4_9BACI (Uncharacterized protein n=1 Tax=Bacillus sp. V5-8f TaxID=2053044 RepID=A0A2N5MDY4_9BACI)

HSP 1 Score: 49.7 bits (117), Expect = 4.050e-5
Identity = 19/49 (38.78%), Postives = 30/49 (61.22%), Query Frame = 0
Query:   23 VNVRDRPSSKSNVLGTFRAGTSVAVLDTNRGWIQVSDGTRTGWVYERFL 71
            +N+R++PS+ S VLGT + G  V  +    GW +VS   + GWV  ++L
Sbjct:   41 LNMREKPSTSSKVLGTLKKGQVVTAIQQQSGWTRVSSSGKNGWVSSKYL 89          
BLAST of mRNA_L-digitata_M_contig101287.1.1 vs. uniprot
Match: A0A3E2JBE4_9BACI (Uncharacterized protein n=1 Tax=Bacillus sp. V59.32b TaxID=1758642 RepID=A0A3E2JBE4_9BACI)

HSP 1 Score: 49.3 bits (116), Expect = 5.590e-5
Identity = 23/72 (31.94%), Postives = 39/72 (54.17%), Query Frame = 0
Query:    6 VATPVAPARDRMIVTSG------VNVRDRPSSKSNVLGTFRAGTSVAVLDTNRGWIQVSDGTRTGWVYERFL 71
            V T VAP++     T        +NVR++P++ S V+G +  G +V +     GW +V  G +TGWV  +++
Sbjct:   18 VFTSVAPSKQVYAATQAKVNATTLNVREKPTTSSKVIGKYTKGQTVTITQQQNGWSKVPVGKKTGWVSSKYV 89          
BLAST of mRNA_L-digitata_M_contig101287.1.1 vs. uniprot
Match: A0A380Y1S8_CYTFI (N-acetylmuramoyl-L-alanine amidase n=14 Tax=Bacillaceae TaxID=186817 RepID=A0A380Y1S8_CYTFI)

HSP 1 Score: 49.3 bits (116), Expect = 5.620e-5
Identity = 18/54 (33.33%), Postives = 35/54 (64.81%), Query Frame = 0
Query:   18 IVTSGVNVRDRPSSKSNVLGTFRAGTSVAVLDTNRGWIQVSDGTRTGWVYERFL 71
            I  + +NVR++PS +S+++G   +G +VAVL  +  W ++S    TGW+  +++
Sbjct:  181 ITANSLNVRNKPSLQSDIIGKLNSGETVAVLSQDDSWTEISFSGNTGWISSQYI 234          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101287.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2N5MDY4_9BACI4.050e-538.78Uncharacterized protein n=1 Tax=Bacillus sp. V5-8f... [more]
A0A3E2JBE4_9BACI5.590e-531.94Uncharacterized protein n=1 Tax=Bacillus sp. V59.3... [more]
A0A380Y1S8_CYTFI5.620e-533.33N-acetylmuramoyl-L-alanine amidase n=14 Tax=Bacill... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003646SH3-like domain, bacterial-typeSMARTSM00287sh3_bac_9coord: 13..74
e-value: 2.9E-7
score: 40.1
IPR003646SH3-like domain, bacterial-typePFAMPF08239SH3_3coord: 21..71
e-value: 5.6E-15
score: 55.5
IPR003646SH3-like domain, bacterial-typePROSITEPS51781SH3Bcoord: 13..75
score: 12.032038
NoneNo IPR availableGENE3D2.30.30.40SH3 Domainscoord: 15..75
e-value: 2.2E-16
score: 61.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101287contigL-digitata_M_contig101287:11..238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101287.1.1mRNA_L-digitata_M_contig101287.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig101287 11..238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig101287.1.1 ID=prot_L-digitata_M_contig101287.1.1|Name=mRNA_L-digitata_M_contig101287.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=76bp
TTPEAVATPVAPARDRMIVTSGVNVRDRPSSKSNVLGTFRAGTSVAVLDT
NRGWIQVSDGTRTGWVYERFLRPSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003646SH3-like_bac-type