prot_L-digitata_M_contig101139.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-digitata_M_contig101139.1.1
Unique Name	prot_L-digitata_M_contig101139.1.1
Type	polypeptide
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length	302

Homology

[Close]

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Match: A0A7V7BF73_9PROT (UvrABC system protein C n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7V7BF73_9PROT)

HSP 1 Score: 514 bits (1323), Expect = 9.090e-178
Identity = 258/302 (85.43%), Postives = 284/302 (94.04%), Query Frame = 0

Query:    1 PKSGPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRPEALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRAFLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFLSGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAARTVEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEAFI 302
            P SGP+VIRAFVK LP++PGVYRM+DE GEV+YVGKAR+LKARVTNYTRPE L+VRLQ+M+A+T SMEFVRTETEAEALLLEANLIKRLRPR+NVLLRDDKSFPYILIAT+HEAPELMKHRG RRRQGHYFGPFASALAVKRTI A+QRAFLLRTCSDSFYKAR RPCML+QIKRC+APCTGEIS  DYA+L E+ARQFLSG+SKSVQDHL+RDMN AAERLDFEQAARLRDRLSALALIQS GDV AR+VEEADVFAI  +AGQF +QVFFFRA QNWGN+A+RPRAD+SLS+AEVLEAFI
Sbjct:    7 PLSGPEVIRAFVKTLPAAPGVYRMLDETGEVVYVGKARNLKARVTNYTRPEGLDVRLQKMIAATRSMEFVRTETEAEALLLEANLIKRLRPRFNVLLRDDKSFPYILIATDHEAPELMKHRGVRRRQGHYFGPFASALAVKRTIAALQRAFLLRTCSDSFYKARTRPCMLYQIKRCSAPCTGEISPADYARLVEDARQFLSGKSKSVQDHLARDMNAAAERLDFEQAARLRDRLSALALIQSQGDVVARSVEEADVFAIAHEAGQFCVQVFFFRAHQNWGNYAYRPRADASLSDAEVLEAFI 308

[Close]

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Match: A0A1Q3YZU4_9HYPH (UvrABC system protein C n=4 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1Q3YZU4_9HYPH)

HSP 1 Score: 496 bits (1277), Expect = 7.920e-171
Identity = 248/301 (82.39%), Postives = 276/301 (91.69%), Query Frame = 0

Query:    2 KSGPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRPEALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRAFLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFLSGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAARTVEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEAFI 302
            ++G D+IRAFVK LPS+PGVYRMIDEAGEV+YVGKARSLKARVTNYTRPE LEVRLQRM+A+T +MEFVRTETEAEALLLEANLIKRL+PR+NVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTI A+Q+AFLLRTCSDSFYKAR RPCMLHQIKRC+APCTGEIS+  YA+L  EARQFLSGRSKSVQDHL  +MN AA  LDFE+AA LRDRLSALAL+QS GDV AR +EEADVFAI  +AGQF +QVFFFRA QNWGN+A+RP+AD +L++ EVLEAF+
Sbjct:    6 ETGADIIRAFVKTLPSAPGVYRMIDEAGEVMYVGKARSLKARVTNYTRPEGLEVRLQRMIAATRTMEFVRTETEAEALLLEANLIKRLKPRFNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTITALQKAFLLRTCSDSFYKARTRPCMLHQIKRCSAPCTGEISLAAYAELVGEARQFLSGRSKSVQDHLQAEMNQAAAALDFERAALLRDRLSALALVQSQGDVVARGIEEADVFAIAHEAGQFCVQVFFFRAHQNWGNYAYRPKADPTLTDTEVLEAFM 306

[Close]

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Match: A0A0Q7E4P9_9HYPH (UvrABC system protein C n=7 Tax=Hyphomicrobiales TaxID=356 RepID=A0A0Q7E4P9_9HYPH)

HSP 1 Score: 493 bits (1270), Expect = 1.250e-169
Identity = 246/302 (81.46%), Postives = 277/302 (91.72%), Query Frame = 0

Query:    1 PKSGPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRPEALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRAFLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFLSGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAARTVEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEAFI 302
            P SG +VI+ FVK LP SPGVYRM DEAGEV+YVGKAR+LKARVTNYTRPE L++R++RM+ +T +MEFVRTETEAEALLLEANLIKRL+PR+NVLLRDDKSFPYILIATEHEA EL KHRG+RR +GHYFGPFASALAVKRTI A+QRAFLLRTCSDSFYKAR RPCMLHQIKRC+APCTGEIS+ DY +L EEARQFLSG+SKSVQDHL+ DMN AAE LDFE+AA LRDRLSALAL+QS GDVA+++VEEADVFAI  +AGQF +QVFFFRA+QNWGNHAFRPRAD+SLS+AEVLEAFI
Sbjct:   15 PISGAEVIKTFVKTLPPSPGVYRMFDEAGEVVYVGKARNLKARVTNYTRPEGLDIRIRRMIEATRNMEFVRTETEAEALLLEANLIKRLKPRFNVLLRDDKSFPYILIATEHEAAELKKHRGSRRIKGHYFGPFASALAVKRTITALQRAFLLRTCSDSFYKARTRPCMLHQIKRCSAPCTGEISMADYNELVEEARQFLSGKSKSVQDHLAADMNVAAENLDFERAALLRDRLSALALVQSQGDVASKSVEEADVFAIGHEAGQFCVQVFFFRAYQNWGNHAFRPRADASLSDAEVLEAFI 316

[Close]

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Match: A0A433XLL7_9HYPH (UvrABC system protein C n=2 Tax=Arsenicitalea aurantiaca TaxID=1783274 RepID=A0A433XLL7_9HYPH)

HSP 1 Score: 491 bits (1264), Expect = 1.080e-168
Identity = 240/301 (79.73%), Postives = 274/301 (91.03%), Query Frame = 0

Query:    2 KSGPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRPEALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRAFLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFLSGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAARTVEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEAFI 302
            +SGPD+IR FV+ LPS+PGVYRM+D AG+VIYVGKARSL++RVTNYTRPE L VR+QRM+ +TH+MEF RTETE+EALLLEANLIKRL+PR+NVLLRDDKSFPYILIAT+HEAPEL+KHRG+RRR GHYFGPFASA AVKRTI A+Q+AFLLR CSDSFY AR RPC+LHQIKRC+ PCTGEIS  DYA+L  EAR FLSG+SKSVQDHL+RDMN AAE LDFE+AA LRDRLSALALIQS GDV+AR+VEEAD+FAIH + GQF +QVFFFRAFQNWGNHAFRPRAD+ L++AEVLEAFI
Sbjct:   18 RSGPDLIREFVRTLPSAPGVYRMLDAAGDVIYVGKARSLRSRVTNYTRPEGLPVRIQRMIVATHAMEFTRTETESEALLLEANLIKRLKPRFNVLLRDDKSFPYILIATDHEAPELLKHRGSRRRPGHYFGPFASATAVKRTITALQKAFLLRNCSDSFYAARTRPCLLHQIKRCSGPCTGEISHADYAELVTEARDFLSGKSKSVQDHLARDMNAAAEALDFERAALLRDRLSALALIQSQGDVSARSVEEADIFAIHHEGGQFCVQVFFFRAFQNWGNHAFRPRADAELTDAEVLEAFI 318

[Close]

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Match: UPI000FDB354A (excinuclease ABC subunit UvrC n=2 Tax=Devosia TaxID=46913 RepID=UPI000FDB354A)

HSP 1 Score: 488 bits (1255), Expect = 2.060e-167
Identity = 238/299 (79.60%), Postives = 274/299 (91.64%), Query Frame = 0

Query:    4 GPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRPEALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRAFLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFLSGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAARTVEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEAFI 302
            GPDVIRAFV+ LP++PGVYRM+D +GEVIYVGKARSLKARV+NYTRPEAL VR+QRMVA+T SMEFVRTETE+EALLLEANLIKRL+PR+NVLLRDDKSFPYILIAT+HEAPELMKHRGTRRRQGHYFGPFAS  AV RTI ++Q+AFLLR CSDSFY AR RPC++HQIKRC+ PCT EIS++DY +L  EA++FLSGRS+SV+DHL +DMN+AAE LDFE+AA LRDRLSALALIQS GD  A++VEEADVFAIH + GQF +QVFFFRAFQNWGNHAFRPRAD+S+S+AEVLEAF+
Sbjct:   14 GPDVIRAFVRTLPAAPGVYRMLDSSGEVIYVGKARSLKARVSNYTRPEALPVRIQRMVAATCSMEFVRTETESEALLLEANLIKRLKPRFNVLLRDDKSFPYILIATDHEAPELMKHRGTRRRQGHYFGPFASVTAVNRTIASLQKAFLLRNCSDSFYAARTRPCLMHQIKRCSGPCTREISLQDYGELVHEAKEFLSGRSQSVRDHLQKDMNEAAEALDFERAALLRDRLSALALIQSQGDATAKSVEEADVFAIHHEGGQFCVQVFFFRAFQNWGNHAFRPRADASMSDAEVLEAFV 312

[Close]

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Match: A0A0F5LWH9_9HYPH (UvrABC system protein C n=2 Tax=Devosia limi DSM 17137 TaxID=1121477 RepID=A0A0F5LWH9_9HYPH)

HSP 1 Score: 479 bits (1233), Expect = 5.140e-164
Identity = 237/300 (79.00%), Postives = 270/300 (90.00%), Query Frame = 0

Query:    3 SGPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRPEALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRAFLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFLSGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAARTVEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEAFI 302
            SG +VI+AFV+ LP++PGVYRMID  GEV+YVGKAR+LKARVTNYTRPEALE RLQRM+A+T +MEFVRTETE+EALLLEANLIKRL+PR+NVLLRDDKSFPYILIAT+H APELMKHRGTRRR+GHYFGPFAS  AV RTI ++Q+AFLLR CSDSFY AR RPC+ HQIKRCAAPCTGEIS+  Y +L EEAR+FLSGRS+ V+DH+  +MN AAE+LDFE+AA LRDRLSALALIQS GD  A++VEEADVFAIH + GQF +QVFFFRAFQNWGNHAFRPRADSSLS+AEVLEAFI
Sbjct:   19 SGHEVIKAFVRTLPAAPGVYRMIDAEGEVMYVGKARNLKARVTNYTRPEALETRLQRMIAATVTMEFVRTETESEALLLEANLIKRLKPRFNVLLRDDKSFPYILIATDHPAPELMKHRGTRRRKGHYFGPFASVTAVNRTIASLQKAFLLRNCSDSFYAARTRPCLQHQIKRCAAPCTGEISLSGYGELVEEAREFLSGRSQGVRDHMQAEMNTAAEQLDFERAALLRDRLSALALIQSQGDATAKSVEEADVFAIHHEGGQFCVQVFFFRAFQNWGNHAFRPRADSSLSDAEVLEAFI 318

[Close]

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Match: A0A0F5FEE8_9HYPH (UvrABC system protein C n=4 Tax=Hyphomicrobiales TaxID=356 RepID=A0A0F5FEE8_9HYPH)

HSP 1 Score: 474 bits (1221), Expect = 2.450e-162
Identity = 236/302 (78.15%), Postives = 269/302 (89.07%), Query Frame = 0

Query:    1 PKSGPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRPEALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRAFLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFLSGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAARTVEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEAFI 302
            P+SGPDVIRAFV+ LP++PGVYRM+D  GEV+YVGKAR+LKARVTNYTRPE LE+RLQRM+AST SMEFVRTETE+EALLLEAN+IKRL+PRYNVLLRDDKSFPYILIAT+HEAPEL KHRG+RRR GHYFGPFASA AV RTI ++Q+AFLLR CSDSFY AR RPC+ +QIKRCA PCT EIS+  Y +L E+ARQFLSG+S+SVQ HL  DMN AAE LDFE+AA LRDRLSALALIQS GD  AR+VEEADVFAIH + GQF +QVFFFRAFQNWGN+ +RPRAD+SL++AEVLEAFI
Sbjct:    8 PQSGPDVIRAFVRTLPAAPGVYRMLDAQGEVMYVGKARNLKARVTNYTRPEGLELRLQRMIASTVSMEFVRTETESEALLLEANMIKRLKPRYNVLLRDDKSFPYILIATDHEAPELTKHRGSRRRPGHYFGPFASATAVGRTIASLQKAFLLRNCSDSFYAARTRPCLQYQIKRCAGPCTREISLDAYGELVEDARQFLSGKSRSVQQHLQADMNKAAEDLDFERAALLRDRLSALALIQSQGDATARSVEEADVFAIHHEGGQFCVQVFFFRAFQNWGNYPYRPRADASLTDAEVLEAFI 309

[Close]

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Match: A0A085EWH2_9HYPH (UvrABC system protein C n=17 Tax=Devosiaceae TaxID=2831106 RepID=A0A085EWH2_9HYPH)

HSP 1 Score: 474 bits (1221), Expect = 3.260e-162
Identity = 236/302 (78.15%), Postives = 272/302 (90.07%), Query Frame = 0

Query:    1 PKSGPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRPEALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRAFLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFLSGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAARTVEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEAFI 302
            P SG +VIRAFV+ LP++PGVYRM+D  GEV+YVGKAR+LKARVTNYTRPEALEVRLQRM+A+T +MEFVRTETE+EALLLEAN+IKRL+PR+NVLLRDDKSFPYILIAT+HEAPEL KHRGTRRR+GHYFGPFASA AV RTI ++Q+AFLLR CSDSFY AR RPC+  QIKRCAAPCT EIS++ Y +L E+ARQFLSG+S+ V+DHL RDMN AAE+LDFE+AA LRDRLSALALIQS GD  A+TVEEADVFAIH + GQF +QVFFFRAFQNWGN+ +RPRAD+SLS+AEVLEAFI
Sbjct:   11 PPSGHEVIRAFVRTLPAAPGVYRMLDAEGEVMYVGKARNLKARVTNYTRPEALEVRLQRMIAATVTMEFVRTETESEALLLEANMIKRLKPRFNVLLRDDKSFPYILIATDHEAPELTKHRGTRRRKGHYFGPFASATAVGRTIASLQKAFLLRNCSDSFYAARTRPCLQFQIKRCAAPCTREISLEGYGELVEDARQFLSGKSQGVRDHLQRDMNQAAEQLDFERAALLRDRLSALALIQSQGDGTAKTVEEADVFAIHHEGGQFCVQVFFFRAFQNWGNYPYRPRADASLSDAEVLEAFI 312

[Close]

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Match: UPI000D3CA352 (excinuclease ABC subunit UvrC n=1 Tax=Devosia submarina TaxID=1173082 RepID=UPI000D3CA352)

HSP 1 Score: 474 bits (1220), Expect = 3.700e-162
Identity = 231/301 (76.74%), Postives = 274/301 (91.03%), Query Frame = 0

Query:    2 KSGPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRPEALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRAFLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFLSGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAARTVEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEAFI 302
            KSG +VIR FV+ LP++PGVYRM+D  GEV+YVGKAR+LKARVTNYTRP+ALE+RLQRM+A+T SMEFVRTETE+EALLLEAN+IKRL+PR+NVLLRDDKSFPYILIAT+HEAPEL KHRGTRRRQGHYFGPFASA AV RTI ++Q+AFLLR CSDSFY AR RPC++HQIKRCA PCT EIS++ Y +L E+ARQFLSG+S+SV+DHL R+MN+AAE+LDFE+AA LRDRLSALAL+QS GD  A++VEEADVFAIH + GQF +QVFFFRA+QNWGN+ +RPRAD+SL++AEVLEAFI
Sbjct:   10 KSGHEVIREFVRTLPAAPGVYRMLDAQGEVMYVGKARNLKARVTNYTRPDALELRLQRMIAATVSMEFVRTETESEALLLEANMIKRLKPRFNVLLRDDKSFPYILIATDHEAPELTKHRGTRRRQGHYFGPFASATAVGRTIASLQKAFLLRNCSDSFYAARTRPCLMHQIKRCAGPCTREISLEGYGELVEDARQFLSGKSQSVRDHLQREMNEAAEQLDFERAALLRDRLSALALVQSQGDATAKSVEEADVFAIHHEGGQFCVQVFFFRAYQNWGNYPYRPRADASLTDAEVLEAFI 310

[Close]

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Match: A0A1E4G0U3_9HYPH (UvrABC system protein C n=1 Tax=Pelagibacterium sp. SCN 64-44 TaxID=1660125 RepID=A0A1E4G0U3_9HYPH)

HSP 1 Score: 473 bits (1217), Expect = 1.020e-161
Identity = 231/302 (76.49%), Postives = 274/302 (90.73%), Query Frame = 0

Query:    1 PKSGPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRPEALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDDKSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRAFLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFLSGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAARTVEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEAFI 302
            P SGP++IRAFV+ LP++PGVYRM+D AGEV+YVGKAR+LKARVTNYTRPEAL +R+QRM+A+T +MEFVRTETE+EALLLEANLIKRLRPR+NVLLRDDKSFPYILIAT+HEAPEL KHRG+RRR G+YFGPFASA AV RT+ ++Q+AFLLR CS SFY AR RPC+  QIKRC+APCTGEIS++DYA+L E+ARQFLSG+S+SVQ HL +DM +AAE+LDFE+AA +RDRLSALALIQS GD  AR+VEEADVFAIHQ+ GQF +QVFFFRA+QNWGN+ +RPRAD+S+ EAEVLEAFI
Sbjct:    7 PASGPEIIRAFVRTLPNAPGVYRMLDAAGEVMYVGKARNLKARVTNYTRPEALSIRIQRMIAATATMEFVRTETESEALLLEANLIKRLRPRFNVLLRDDKSFPYILIATDHEAPELNKHRGSRRRPGYYFGPFASATAVARTLASLQKAFLLRNCSASFYAARTRPCLQFQIKRCSAPCTGEISLEDYAKLVEDARQFLSGKSRSVQQHLQQDMAEAAEQLDFERAALIRDRLSALALIQSQGDATARSVEEADVFAIHQEGGQFCVQVFFFRAYQNWGNYPYRPRADASMDEAEVLEAFI 308

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig101139.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7V7BF73_9PROT	9.090e-178	85.43	UvrABC system protein C n=1 Tax=Alphaproteobacteri...	[more]
A0A1Q3YZU4_9HYPH	7.920e-171	82.39	UvrABC system protein C n=4 Tax=Hyphomicrobiales T...	[more]
A0A0Q7E4P9_9HYPH	1.250e-169	81.46	UvrABC system protein C n=7 Tax=Hyphomicrobiales T...	[more]
A0A433XLL7_9HYPH	1.080e-168	79.73	UvrABC system protein C n=2 Tax=Arsenicitalea aura...	[more]
UPI000FDB354A	2.060e-167	79.60	excinuclease ABC subunit UvrC n=2 Tax=Devosia TaxI...	[more]
A0A0F5LWH9_9HYPH	5.140e-164	79.00	UvrABC system protein C n=2 Tax=Devosia limi DSM 1...	[more]
A0A0F5FEE8_9HYPH	2.450e-162	78.15	UvrABC system protein C n=4 Tax=Hyphomicrobiales T...	[more]
A0A085EWH2_9HYPH	3.260e-162	78.15	UvrABC system protein C n=17 Tax=Devosiaceae TaxID...	[more]
UPI000D3CA352	3.700e-162	76.74	excinuclease ABC subunit UvrC n=1 Tax=Devosia subm...	[more]
A0A1E4G0U3_9HYPH	1.020e-161	76.49	UvrABC system protein C n=1 Tax=Pelagibacterium sp...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000305	GIY-YIG endonuclease	SMART	SM00465	uri_9	coord: 18..99 e-value: 2.5E-17 score: 73.6
IPR000305	GIY-YIG endonuclease	PFAM	PF01541	GIY-YIG	coord: 20..94 e-value: 5.4E-7 score: 29.8
IPR000305	GIY-YIG endonuclease	PROSITE	PS50164	GIY_YIG	coord: 17..95 score: 21.892256
IPR001943	UVR domain	PFAM	PF02151	UVR	coord: 206..237 e-value: 9.6E-10 score: 37.9
IPR001943	UVR domain	PROSITE	PS50151	UVR	coord: 205..240 score: 10.688992
None	No IPR available	GENE3D	4.10.860.10	UVR domain	coord: 207..240 e-value: 8.9E-8 score: 33.5
None	No IPR available	PANTHER	PTHR30562:SF1	UVRABC SYSTEM PROTEIN C	coord: 7..302
None	No IPR available	PANTHER	PTHR30562	UVRC/OXIDOREDUCTASE	coord: 7..302
None	No IPR available	CDD	cd10434	GIY-YIG_UvrC_Cho	coord: 15..95 e-value: 2.982E-38 score: 128.371
IPR035901	GIY-YIG endonuclease superfamily	GENE3D	3.40.1440.10		coord: 6..103 e-value: 8.6E-32 score: 111.4
IPR035901	GIY-YIG endonuclease superfamily	SUPERFAMILY	82771	GIY-YIG endonuclease	coord: 18..101
IPR036876	UVR domain superfamily	SUPERFAMILY	46600	C-terminal UvrC-binding domain of UvrB	coord: 192..240

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig101139	contig	L-digitata_M_contig101139:26..931 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig101139.1.1	mRNA_L-digitata_M_contig101139.1.1	Laminaria digitata LdigPH10_18mv male	mRNA	L-digitata_M_contig101139 26..931 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-digitata_M_contig101139.1.1 ID=prot_L-digitata_M_contig101139.1.1|Name=mRNA_L-digitata_M_contig101139.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=302bp
PKSGPDVIRAFVKNLPSSPGVYRMIDEAGEVIYVGKARSLKARVTNYTRP
EALEVRLQRMVASTHSMEFVRTETEAEALLLEANLIKRLRPRYNVLLRDD
KSFPYILIATEHEAPELMKHRGTRRRQGHYFGPFASALAVKRTINAMQRA
FLLRTCSDSFYKARRRPCMLHQIKRCAAPCTGEISIKDYAQLAEEARQFL
SGRSKSVQDHLSRDMNDAAERLDFEQAARLRDRLSALALIQSGGDVAART
VEEADVFAIHQDAGQFLIQVFFFRAFQNWGNHAFRPRADSSLSEAEVLEA
FI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000305	GIY-YIG_endonuc
IPR001943	UVR_dom
IPR035901	GIY-YIG_endonuc_sf
IPR036876	UVR_dom_sf