prot_L-digitata_M_contig10107.4.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10107.4.1
Unique Nameprot_L-digitata_M_contig10107.4.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length426
Homology
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BLAST of mRNA_L-digitata_M_contig10107.4.1 vs. uniprot
Match: A0A6H5K5Q3_9PHAE (AP4E_app_platf domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5Q3_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 3.640e-15
Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 0 
Query:    4 AVAPQAPLPPPQSSGGAGTPLSTADIFASGPRLRPVSKVWGRPKPGD 50
            A APQAPLPPPQSSGGAG PLSTADIFASGPRLRPVSKVWGRP+PG+
Sbjct:  661 AAAPQAPLPPPQSSGGAGDPLSTADIFASGPRLRPVSKVWGRPRPGE 707
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10107.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5Q3_9PHAE3.640e-1591.49AP4E_app_platf domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..426

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10107contigL-digitata_M_contig10107:4279..6789 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10107.4.1mRNA_L-digitata_M_contig10107.4.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10107 4279..6789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10107.4.1 ID=prot_L-digitata_M_contig10107.4.1|Name=mRNA_L-digitata_M_contig10107.4.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=426bp
MSAAVAPQAPLPPPQSSGGAGTPLSTADIFASGPRLRPVSKVWGRPKPGD
AQQQQPGAGGGGGVGASGAKESLEAAAAAKTVGAAGGGYPSSAGKAAADP
SSSSAAGGYDSRRGSWGGGGGGGGAPPAEVKEDPIAAAQRAEKEKMASML
FGGTGGTRTKATASPAGISSRSRISSASSSSRPDATAAAAATVAASAAAA
AVASTPSTPRATAAAGASSSPPAATAPVDLLDFMSMEAPPAVASDDLLGG
VGEPSTTTAAATAAAAARARSSSASSTSLSSSPNQPGVDLLGGIGGGGSP
PSSQAFGANGSSSAGAAQTLDDLLGGGTGDIGGASSNGAGGGAQSALNNG
DGIGAAAMGNGEQAWPGASGNRAGAAGSPSSGATATAAAALGQSASAELD
LSGLFLGDASSSSASSPGGLRGSAGG
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