prot_L-digitata_M_contig10095.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10095.2.1
Unique Nameprot_L-digitata_M_contig10095.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length140
Homology
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 1.180e-58
Identity = 100/138 (72.46%), Postives = 108/138 (78.26%), Query Frame = 0
Query:    1 MYETTLSALKEEGNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSVYLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTATNDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRL 138
            MYETTLSALKEEGNERMWFNTYVKLAKV                      YLQIPDY KVQTTID LHDSCRL +G+DDP+KGNQLLEVYGITIQL TATN++ +MKEVYPK  DLNASVEDPRIMGVIREQGGK+ +
Sbjct:   43 MYETTLSALKEEGNERMWFNTYVKLAKV----------------------YLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYM 158          
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.120e-57
Identity = 100/138 (72.46%), Postives = 108/138 (78.26%), Query Frame = 0
Query:    1 MYETTLSALKEEGNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSVYLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTATNDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRL 138
            MYETTLSALKEEGNERMWFNTYVKLAKV                      YLQIPDY KVQTTID LHDSCRL +G+DDP+KGNQLLEVYGITIQL TATN++ +MKEVYPK  DLNASVEDPRIMGVIREQGGK+ +
Sbjct:  135 MYETTLSALKEEGNERMWFNTYVKLAKV----------------------YLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYM 250          
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Match: A0A7S2BKS2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKS2_9STRA)

HSP 1 Score: 138 bits (348), Expect = 3.650e-36
Identity = 71/138 (51.45%), Postives = 86/138 (62.32%), Query Frame = 0
Query:    1 MYETTLSALKEEGNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSVYLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTATNDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRL 138
            MY+ TL+ALK   NER+WFNTYVK  K                       YLQ  DY +V   +  LH SC+LPDG DDP KG  LLEVY + IQL TAT  S+ MK++YPK  +LNA+V DPRIMGVIRE+GGK+ +
Sbjct:  159 MYDITLTALKTANNERLWFNTYVKYGKA----------------------YLQSKDYNQVNRIVQELHRSCQLPDGTDDPTKGTYLLEVYALEIQLCTATKSSSRMKQIYPKTLNLNAAVADPRIMGVIREEGGKMYM 274          
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Match: A0A6V1ITC2_HETAK (COP9 signalosome complex subunit 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ITC2_HETAK)

HSP 1 Score: 137 bits (346), Expect = 5.060e-36
Identity = 73/138 (52.90%), Postives = 86/138 (62.32%), Query Frame = 0
Query:    1 MYETTLSALKEEGNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSVYLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTATNDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRL 138
            MYE TL+ALK   NERMWF T  KL +V                      +LQ  DY+ VQ  ID  H SC LPDG DDPAKG  LLEVY + IQL TAT ++  M+EVYPK  +LNA+V DPRIMGVIRE+GGK+ +
Sbjct:  134 MYELTLAALKRAANERMWFGTLCKLGRV----------------------HLQQEDYSGVQRVIDEAHRSCLLPDGSDDPAKGTSLLEVYALEIQLCTATRNAARMREVYPKTLNLNAAVADPRIMGVIREEGGKMHM 249          
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Match: A0A1W0ACK2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACK2_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.880e-31
Identity = 64/138 (46.38%), Postives = 84/138 (60.87%), Query Frame = 0
Query:    1 MYETTLSALKEEGNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSVYLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTATNDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRL 138
            MYE TL ALK   N+R+WF T +KL K+                      YL++ DYA +   ++ LH SC+LPDG DD  K   LL+VY + IQL TATN++  MK +YPK   L+A++ DPRIMGVIRE+GGK+ L
Sbjct:  140 MYEITLEALKNANNDRLWFQTNIKLGKL----------------------YLELGDYAPLHKVLEELHASCKLPDGTDDMTKATSLLDVYCLEIQLCTATNNAAKMKTIYPKTLVLDAAISDPRIMGVIREEGGKLYL 255          
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Match: A0A067CVR0_SAPPC (COP9 signalosome complex subunit 2 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVR0_SAPPC)

HSP 1 Score: 122 bits (307), Expect = 2.510e-30
Identity = 62/138 (44.93%), Postives = 84/138 (60.87%), Query Frame = 0
Query:    1 MYETTLSALKEEGNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSVYLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTATNDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRL 138
            MY  TL AL+   N+R+WF T +KL K+                      YL++ DYA +   ++ LH SC+LPDG DD +K   LL+VY + IQL TATND+  MK +YPK   L+A++ DPRIMGVIRE+GGK+ +
Sbjct:  141 MYTMTLDALRVASNDRLWFQTNIKLGKL----------------------YLELGDYAPLHRVLEELHASCKLPDGSDDTSKATSLLDVYCLEIQLCTATNDTKKMKVLYPKTLGLDAAISDPRIMGVIREEGGKMYM 256          
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Match: A0A7S2W4K8_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4K8_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.850e-30
Identity = 69/139 (49.64%), Postives = 84/139 (60.43%), Query Frame = 0
Query:    1 MYETTLSALKEE-GNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSVYLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTATNDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRL 138
            +YE  L+ LK+   NER+WFNT V                   R G  C   L   D A+V+  +  LH SCRLPDG DDPAKG  LLEVY + IQL TAT D+  MK +YPK  +LNA+V DPRIMGVIRE+GGK+ +
Sbjct:  180 IYEIALTTLKQSVNNERLWFNTCV-------------------RYGKAC---LAAGDVAQVRKAVADLHASCRLPDGSDDPAKGTYLLEVYALEIQLCTATKDTARMKALYPKTLNLNAAVADPRIMGVIREEGGKMYM 296          
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Match: A0A7R9YB37_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB37_9STRA)

HSP 1 Score: 121 bits (303), Expect = 7.730e-30
Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 0
Query:    1 MYETTLSALKEEGNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSVYLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTATNDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRLG 139
            +YE TL ALK   NER+W NT +KL +V                      +L+  +Y++V      L ++CRLPDG DD  KG+ LLE Y + IQL T T++++ MKE+YPK   LNA+V DPRIMG+IRE+GGK+ +G
Sbjct:  130 VYEITLQALKNANNERLWLNTNIKLGRV----------------------HLEAKNYSRVAEIARELQEACRLPDGTDDLPKGSYLLEAYALEIQLCTQTHNTSRMKEIYPKTEALNAAVADPRIMGIIREEGGKMFMG 246          
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Match: A0A485KE06_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KE06_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.290e-29
Identity = 59/138 (42.75%), Postives = 82/138 (59.42%), Query Frame = 0
Query:    2 YETTLSALKEEGNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSVYLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTATNDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRLG 139
            YE TL ALK   N+R+WF T +KL ++                      YL++ ++  ++  +  LH SC+ PDG DD  K   LL+VY + IQL TATND+  MK +YPK  DL+A++ DPR MGVIRE+GGK+ +G
Sbjct:  146 YEITLDALKSANNDRLWFQTNIKLGRL----------------------YLELGEFVPLKRVLKELHTSCKTPDGHDDMTKATSLLDVYCLEIQLCTATNDTIKMKTIYPKTLDLDAAISDPRTMGVIREEGGKMYMG 261          
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Match: A0A7S3M6V7_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6V7_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.200e-29
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    1 MYETTLSALKEEGNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSVYLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTATNDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRL 138
            MYE TL ALK   NER+WFNT +KLAKV                      YL+     +V   I AL ++C+ P+G DD +KG  LLE+Y + IQL   +++S  MK++YPK  +LNA+V DPRIMG+IRE+GGK+++
Sbjct:   41 MYEITLLALKASNNERLWFNTNLKLAKV----------------------YLEEGKLQEVDRLISALKETCKTPEGNDDLSKGTLLLEIYCLEIQLCAVSHNSLRMKQIYPKTMNLNAAVADPRIMGIIREEGGKMQM 156          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10095.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR5_ECTSI1.180e-5872.46COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6H5JKQ1_9PHAE1.120e-5772.46COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A7S2BKS2_9STRA3.650e-3651.45COP9 signalosome complex subunit 2 n=1 Tax=Dictyoc... [more]
A0A6V1ITC2_HETAK5.060e-3652.90COP9 signalosome complex subunit 2 n=1 Tax=Heteros... [more]
A0A1W0ACK2_9STRA1.880e-3146.38COP9 signalosome complex subunit 2 n=1 Tax=Thraust... [more]
A0A067CVR0_SAPPC2.510e-3044.93COP9 signalosome complex subunit 2 n=2 Tax=Saprole... [more]
A0A7S2W4K8_9STRA4.850e-3049.64COP9 signalosome complex subunit 2 n=2 Tax=Rhizoch... [more]
A0A7R9YB37_9STRA7.730e-3044.60COP9 signalosome complex subunit 2 n=1 Tax=Pinguio... [more]
A0A485KE06_9STRA1.290e-2942.75COP9 signalosome complex subunit 2 n=1 Tax=Aphanom... [more]
A0A7S3M6V7_9STRA2.200e-2944.93COP9 signalosome complex subunit 2 n=1 Tax=Spumell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.570coord: 4..138
e-value: 6.2E-8
score: 34.1
NoneNo IPR availablePANTHERPTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 1..31
coord: 47..138
IPR037750COP9 signalosome complex subunit 2PANTHERPTHR10678:SF3COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 1..31
coord: 47..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10095contigL-digitata_M_contig10095:3098..4271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10095.2.1mRNA_L-digitata_M_contig10095.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10095 3089..4271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10095.2.1 ID=prot_L-digitata_M_contig10095.2.1|Name=mRNA_L-digitata_M_contig10095.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=140bp
MYETTLSALKEEGNERMWFNTYVKLAKVSREKYEAWMKKRKKRAGLFCSV
YLQIPDYAKVQTTIDALHDSCRLPDGRDDPAKGNQLLEVYGITIQLSTAT
NDSTMMKEVYPKITDLNASVEDPRIMGVIREQGGKVRLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037750COPS2