prot_L-digitata_M_contig10095.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10095.1.1
Unique Nameprot_L-digitata_M_contig10095.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length65
Homology
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 5.380e-23
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    1 FKALEHLVRLYFQLGEHDHMLQRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDLRMVRGRHNT 65
            FKALEHLVR++F L E D M QRYKELLTHVS+VTRNESSDSVNGILDTVSVSEDLRMV   + T
Sbjct:   74 FKALEHLVRIHFLLKEFDQMQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYET 138          
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 2.170e-14
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0
Query:   20 MLQRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDLRMVRGRHNT 65
            M QRYKELLTHVS+VTRNESSDSVNGILDTVSVSEDLRMV   + T
Sbjct:    1 MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYET 46          
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Match: W7U093_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U093_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.310e-10
Identity = 30/51 (58.82%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 FKALEHLVRLYFQLGEHDHMLQRYKELLTHVSAVTRNESSDSVNGILDTVS 51
            FK LE +V L F+LGEH+ ML  Y+ LL++ SAVTRNES+D++N +LDT+S
Sbjct:   78 FKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTIS 128          
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Match: A0A482SB81_9ARCH (COP9 signalosome complex subunit 2 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB81_9ARCH)

HSP 1 Score: 62.0 bits (149), Expect = 1.170e-9
Identity = 27/59 (45.76%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 FKALEHLVRLYFQLGEHDHMLQRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDLRMV 59
            FKAL++LV +YF LG++D M+ RY  +L +++AVTRNE ++++N ILDT++ S +++++
Sbjct:   15 FKALQYLVVIYFSLGQYDKMVDRYHSMLQYLAAVTRNECTEAINLILDTIASSTNVQVL 73          
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Match: A0A6A7FRU0_9CRUS (COP9 signalosome complex subunit 2 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FRU0_9CRUS)

HSP 1 Score: 62.0 bits (149), Expect = 1.180e-9
Identity = 29/59 (49.15%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 FKALEHLVRLYFQLGEHDHMLQRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDLRMV 59
            FKALE +V ++FQ   +D M+ RYKELL+  S VTRN+SS+S+N IL+ V  S++  ++
Sbjct:  107 FKALERIVTIHFQFQNYDQMISRYKELLSFASEVTRNDSSESINNILNCVGESKNFELL 165          
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Match: A0A6G1SJI0_9ACAR (COP9 signalosome complex subunit 2 n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SJI0_9ACAR)

HSP 1 Score: 60.1 bits (144), Expect = 5.590e-9
Identity = 29/66 (43.94%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    1 FKALEHLVRLYFQLGEHDHMLQRYKELLTHV-SAVTRNESSDSVNGILDTVSVSEDLRMVRGRHNT 65
            FKAL+ ++++ F+LG H+ M+ RYK+LL ++ SAVTRN S  S+N ILD +S S  + +++  + T
Sbjct:   70 FKALKQMIKINFKLGNHEEMMNRYKQLLMYIKSAVTRNYSEKSINSILDYISTSHRMDLLQEFYET 135          
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Match: A0A836CJA4_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA4_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.040e-8
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    3 ALEHLVRLYFQLGEHDHMLQRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDLRMV 59
            ALE +V L+ +L +   ML+RY+E+L +VS VTRNE +DS+N +LDTVS   DL+ V
Sbjct:   52 ALEQMVILHHRLQQMPQMLERYREMLGYVSRVTRNECTDSINQVLDTVSACTDLKSV 108          
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Match: A0A061QWV0_9CHLO (COP9 signalosome complex subunit 2 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QWV0_9CHLO)

HSP 1 Score: 58.5 bits (140), Expect = 1.950e-8
Identity = 27/66 (40.91%), Postives = 48/66 (72.73%), Query Frame = 0
Query:    1 FKALEHLVRLYFQLGEHDHMLQRYKELLTHV-SAVTRNESSDSVNGILDTVSVSEDLRMVRGRHNT 65
            FKAL+ +V++Y++LG HD ML+ Y+++L++V SAVTRN+    +N +LD V  S ++ +++  + T
Sbjct:   62 FKALKQIVKIYYKLGNHDKMLESYRQMLSYVKSAVTRNQGEKKINSLLDHVGQSTNVDLLQEFYET 127          
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Match: D2V309_NAEGR (COP9 signalosome complex subunit 2 (Fragment) n=3 Tax=Naegleria TaxID=5761 RepID=D2V309_NAEGR)

HSP 1 Score: 57.4 bits (137), Expect = 5.000e-8
Identity = 28/59 (47.46%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    1 FKALEHLVRLYFQLGEHDHMLQRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDLRMV 59
            FK+L+ +V+  F+ G  + M+QRYKELLT++S V+RNES  ++N +L  VS S D  M+
Sbjct:   77 FKSLKQMVKTLFKAGMMEQMVQRYKELLTYMSIVSRNESEKAINKVLSMVSSSTDKNML 135          
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Match: A0A7S4PTK5_9DINO (COP9 signalosome complex subunit 2 n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PTK5_9DINO)

HSP 1 Score: 56.6 bits (135), Expect = 9.380e-8
Identity = 26/56 (46.43%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    1 FKALEHLVRLYFQLGEHDHMLQRYKELLTHVSAVTRNESSDSVNGILDTVSVSEDL 56
            FKAL+++V L  ++G  D M  RY+ELL+++  VTRN++S+++N +LD+VS + DL
Sbjct:  108 FKALQNIVILCARIGRFDEMATRYRELLSYMDQVTRNDASEAINTVLDSVSSASDL 163          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10095.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKQ1_9PHAE5.380e-2380.00COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
D7FRR5_ECTSI2.170e-1484.78COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
W7U093_9STRA1.310e-1058.82COP9 signalosome complex subunit 2 n=2 Tax=Monodop... [more]
A0A482SB81_9ARCH1.170e-945.76COP9 signalosome complex subunit 2 n=1 Tax=archaeo... [more]
A0A6A7FRU0_9CRUS1.180e-949.15COP9 signalosome complex subunit 2 (Fragment) n=1 ... [more]
A0A6G1SJI0_9ACAR5.590e-943.94COP9 signalosome complex subunit 2 n=1 Tax=Aceria ... [more]
A0A836CJA4_9STRA1.040e-852.63COP9 signalosome complex subunit 2 n=1 Tax=Tribone... [more]
A0A061QWV0_9CHLO1.950e-840.91COP9 signalosome complex subunit 2 n=1 Tax=Tetrase... [more]
D2V309_NAEGR5.000e-847.46COP9 signalosome complex subunit 2 (Fragment) n=3 ... [more]
A0A7S4PTK5_9DINO9.380e-846.43COP9 signalosome complex subunit 2 n=2 Tax=Alexand... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10095contigL-digitata_M_contig10095:1633..2149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10095.1.1mRNA_L-digitata_M_contig10095.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10095 1633..2149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10095.1.1 ID=prot_L-digitata_M_contig10095.1.1|Name=mRNA_L-digitata_M_contig10095.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=65bp
FKALEHLVRLYFQLGEHDHMLQRYKELLTHVSAVTRNESSDSVNGILDTV
SVSEDLRMVRGRHNT
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