prot_L-digitata_M_contig100862.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-digitata_M_contig100862.2.1
Unique Name	prot_L-digitata_M_contig100862.2.1
Type	polypeptide
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length	150

Homology

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BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Match: A0A2D7FJ37_9PROT (DNA-binding transcriptional regulator NtrC n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FJ37_9PROT)

HSP 1 Score: 257 bits (656), Expect = 1.380e-81
Identity = 128/150 (85.33%), Postives = 140/150 (93.33%), Query Frame = 0

Query:    1 MNEASTILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGDLVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELMSVVERGLLDPSEVNIATPLDGEEKLPLIGRSVAMQNI 150
            M++ +TILVADDDRA+R VLERALT+QGYDVRLT N+RTLWSWV DGEGD+V+TDVVMPDENGLDLVPRIR++RPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTEL+SVVERGLLD SE  I+ PL GEEKLPLIGRS AMQNI
Sbjct:    1 MSKKATILVADDDRAIRIVLERALTQQGYDVRLTGNSRTLWSWVEDGEGDIVVTDVVMPDENGLDLVPRIRQLRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELISVVERGLLDSSEPTISAPLGGEEKLPLIGRSAAMQNI 150

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BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Match: A0A520NRT0_9PROT (DNA-binding transcriptional regulator NtrC n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NRT0_9PROT)

HSP 1 Score: 241 bits (616), Expect = 1.390e-75
Identity = 121/150 (80.67%), Postives = 135/150 (90.00%), Query Frame = 0

Query:    1 MNEASTILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGDLVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELMSVVERGLLDPSEVNIATPLDGEEKLPLIGRSVAMQNI 150
            MN  STIL+ADDDRA+RTVLERAL R+GYDV+L+ NARTLWSWVADGEGDLVITDVVMPDENGLDLVP+IR++RPELK+IVMSAQSTLLTAVKANERGAYEYLPKPFDLTEL++VV+R L D SEV  A P +  E LPLIGRS AMQ+I
Sbjct:    1 MNNPSTILIADDDRAIRTVLERALVREGYDVKLSGNARTLWSWVADGEGDLVITDVVMPDENGLDLVPQIRKLRPELKVIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELLAVVDRALRDTSEVGPALPDETTEHLPLIGRSTAMQSI 150

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BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Match: A0A2S6QCF9_9PROT (DNA-binding transcriptional regulator NtrC n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QCF9_9PROT)

HSP 1 Score: 228 bits (580), Expect = 3.420e-70
Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 0

Query:    1 MNEASTILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGDLVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELMSVVERGLLDPSEVNIATPLDGEEKLPLIGRSVAMQNI 150
            M+E ST+L+ADDDRA+RTVLERAL R+GYDV+++ NARTLWSWVA GEGDLVITDV+MPDENGLDLV RIRE RPELK+IVMSAQSTLLTAVKANERGAYEYLPKPFDL EL++VVER L + ++     P    EKLPLIGRS  MQNI
Sbjct:    1 MSEISTVLIADDDRAIRTVLERALIREGYDVKVSGNARTLWSWVAGGEGDLVITDVIMPDENGLDLVLRIREFRPELKVIVMSAQSTLLTAVKANERGAYEYLPKPFDLPELLAVVERALRERTDTVPVVPAQQIEKLPLIGRSAPMQNI 150

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BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Match: UPI0019A8F141 (Response regulator n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=UPI0019A8F141)

HSP 1 Score: 209 bits (532), Expect = 4.270e-67
Identity = 106/148 (71.62%), Postives = 122/148 (82.43%), Query Frame = 0

Query:    6 TILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGDLVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELMSVVERGLLDP---SEVNIATPLDGEEKLPLIGRSVAMQNI 150
            T+LVADDDR++RTVL +AL R GY VR T NA TLW WV DGEGDLVITDVVMPDENGLDL+PRI+ IRPEL+++VMSAQSTL+TAVKA +RGA+EYLPKPFDL EL++VV R L  P   S+   A P D EE+LPLIGRSVAMQ I
Sbjct:    5 TVLVADDDRSIRTVLTQALGRSGYQVRCTGNAATLWRWVEDGEGDLVITDVVMPDENGLDLIPRIKRIRPELRVVVMSAQSTLMTAVKAAQRGAFEYLPKPFDLKELLAVVGRALQAPAPASDTPPAEPRDAEERLPLIGRSVAMQEI 152

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BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Match: A0A522W5H3_9PROT (Response regulator (Fragment) n=1 Tax=Magnetospirillum sp. TaxID=31872 RepID=A0A522W5H3_9PROT)

HSP 1 Score: 207 bits (528), Expect = 7.430e-65
Identity = 104/151 (68.87%), Postives = 124/151 (82.12%), Query Frame = 0

Query:    1 MNEASTILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGDLVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELMSVVERGLLDP-SEVNIATPLDGEEKLPLIGRSVAMQNI 150
            M   +TIL+ADDDR +RTVL +AL R GY+VR T NA TLW WVADGEGDLVITDVVMPDENGLDL+PRI++IRP+L+I+ MSAQSTLLTAVKA +RGA+EYLPKPFDL ++++VV R L  P ++ + A   DGEE LPLIGRS AMQ I
Sbjct:    1 MTHPATILIADDDRGIRTVLTQALNRAGYEVRTTGNAATLWRWVADGEGDLVITDVVMPDENGLDLIPRIKKIRPDLRIVAMSAQSTLLTAVKAAQRGAFEYLPKPFDLKDVVNVVGRALAAPKADPSFAVQSDGEEALPLIGRSSAMQEI 151

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BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Match: A0A840Y3X8_9PROT (DNA-binding transcriptional regulator NtrC n=13 Tax=Roseomonas TaxID=125216 RepID=A0A840Y3X8_9PROT)

HSP 1 Score: 212 bits (540), Expect = 3.290e-64
Identity = 105/150 (70.00%), Postives = 120/150 (80.00%), Query Frame = 0

Query:    1 MNEASTILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGDLVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELMSVVERGLLDPSEVNIATPLDGEEKLPLIGRSVAMQNI 150
            MNE  TIL+ADDDRA+RTVL +AL R GY VR TS+A TLW WV DGEGDLVITDVVMPDENGLDLVPRIR +RPEL+++VMSAQST  TAVKA +RGA+EYLPKPFDL EL+ VVER L  P+E +        E+LPL+GRS AMQ I
Sbjct:    1 MNEPRTILIADDDRAIRTVLSQALARSGYQVRATSSAATLWRWVEDGEGDLVITDVVMPDENGLDLVPRIRRVRPELRVVVMSAQSTFATAVKATQRGAFEYLPKPFDLKELLGVVERALAAPAEPSAPAEEPEAERLPLVGRSAAMQEI 150

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BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Match: A0A2E7QGE2_9PROT (Nitrogen regulation protein NR(I) (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QGE2_9PROT)

HSP 1 Score: 203 bits (517), Expect = 6.280e-64
Identity = 98/147 (66.67%), Postives = 126/147 (85.71%), Query Frame = 0

Query:    4 ASTILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGDLVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELMSVVERGLLDPSEVNIATPLDGEEKLPLIGRSVAMQNI 150
            A+TIL+ADDD A+RTVL++AL R+GY+V+ T NA TLW WV++GEG+LVITDVVMPDENGLDL+PRI++IRPEL++IVMSAQ+TL+TAV A +RGA++YLPKPFDL EL +VV+R L    E   ++  +GEE+LPLIGRSVAMQ +
Sbjct:    3 ATTILIADDDGAIRTVLDQALGREGYEVKTTGNAATLWKWVSEGEGNLVITDVVMPDENGLDLLPRIKKIRPELRVIVMSAQNTLMTAVNATQRGAFDYLPKPFDLNELTNVVKRALQASKESQGSSAPEGEEQLPLIGRSVAMQEV 149

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BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Match: A0A7W9ZEE1_NOVIT (DNA-binding transcriptional regulator NtrC n=2 Tax=Novispirillum itersonii TaxID=189 RepID=A0A7W9ZEE1_NOVIT)

HSP 1 Score: 210 bits (535), Expect = 1.750e-63
Identity = 106/148 (71.62%), Postives = 126/148 (85.14%), Query Frame = 0

Query:    4 ASTILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGDLVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELMSVVERGL-LDPSEVNIATPLDGEEKLPLIGRSVAMQNI 150
            +STILVADDD  +RTVL +ALTR GYDVR TSNA TLW WV+DG+GDLVITDVVMPDENGLDL+PRI+++RP+L++IVMS Q+TLLTAVKANERGA+EYLPKPFDL EL++VV R L L  S  + A   + EE+LPLIGRS AMQ+I
Sbjct:    2 SSTILVADDDHGIRTVLTQALTRAGYDVRTTSNAATLWRWVSDGDGDLVITDVVMPDENGLDLLPRIKKLRPDLRVIVMSVQNTLLTAVKANERGAFEYLPKPFDLQELVAVVRRALSLPKSAPSAAAVAEDEERLPLIGRSTAMQDI 149

[Close]

BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Match: A0A2D6M5S5_9PROT (Nitrogen regulation protein NR(I) (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6M5S5_9PROT)

HSP 1 Score: 203 bits (517), Expect = 1.820e-63
Identity = 103/149 (69.13%), Postives = 126/149 (84.56%), Query Frame = 0

Query:    4 ASTILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGDLVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELMSVVERGLLDP-SEVNIATPLD-GEEKLPLIGRSVAMQNI 150
            A+TILVADDD+A+RTV+ +AL R+GY+VR T NA TLW WV++G+GDLVITDVVMPDENGLDL+PRIR+IRP L+I+VMSAQ+TLLTAVKA ERGA+EYLPKPFD+ EL  VV+R L +P S+   A  ++ G+E LPLIGRS AMQ I
Sbjct:    3 AATILVADDDKAIRTVITQALGREGYEVRTTGNAATLWRWVSEGDGDLVITDVVMPDENGLDLIPRIRKIRPNLRILVMSAQNTLLTAVKATERGAFEYLPKPFDINELTQVVQRALSEPKSDSPAAQEIEVGDEALPLIGRSPAMQEI 151

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BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Match: K9GP44_9PROT (DNA-binding transcriptional regulator NtrC n=2 Tax=Caenispirillum TaxID=414051 RepID=K9GP44_9PROT)

HSP 1 Score: 209 bits (533), Expect = 3.890e-63
Identity = 107/148 (72.30%), Postives = 121/148 (81.76%), Query Frame = 0

Query:    5 STILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGDLVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAYEYLPKPFDLTELMSVVERG--LLDPSEVNIATPLDGEEKLPLIGRSVAMQNI 150
            STILVADDD  +RTVL +AL R GYDVR T NA TLW WV+DGEGDLVITDVVMPDENGLDL+PRI++IRP+++IIVMSAQ+TLLTAVKA ERGA+EYLPKPFDLTEL++VV R   L  PS    +   D EE LPLIGRS AMQ I
Sbjct:    4 STILVADDDHGIRTVLSQALGRAGYDVRTTGNAATLWRWVSDGEGDLVITDVVMPDENGLDLIPRIKKIRPDMRIIVMSAQNTLLTAVKATERGAFEYLPKPFDLTELVNVVNRAISLPKPSTTGASVAADDEEALPLIGRSTAMQEI 151

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig100862.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2D7FJ37_9PROT	1.380e-81	85.33	DNA-binding transcriptional regulator NtrC n=1 Tax...	[more]
A0A520NRT0_9PROT	1.390e-75	80.67	DNA-binding transcriptional regulator NtrC n=2 Tax...	[more]
A0A2S6QCF9_9PROT	3.420e-70	76.00	DNA-binding transcriptional regulator NtrC n=1 Tax...	[more]
UPI0019A8F141	4.270e-67	71.62	Response regulator n=1 Tax=Gemmatimonadaceae bacte...	[more]
A0A522W5H3_9PROT	7.430e-65	68.87	Response regulator (Fragment) n=1 Tax=Magnetospiri...	[more]
A0A840Y3X8_9PROT	3.290e-64	70.00	DNA-binding transcriptional regulator NtrC n=13 Ta...	[more]
A0A2E7QGE2_9PROT	6.280e-64	66.67	Nitrogen regulation protein NR(I) (Fragment) n=1 T...	[more]
A0A7W9ZEE1_NOVIT	1.750e-63	71.62	DNA-binding transcriptional regulator NtrC n=2 Tax...	[more]
A0A2D6M5S5_9PROT	1.820e-63	69.13	Nitrogen regulation protein NR(I) (Fragment) n=1 T...	[more]
K9GP44_9PROT	3.890e-63	72.30	DNA-binding transcriptional regulator NtrC n=2 Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 5..116 e-value: 1.1E-30 score: 117.9
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 7..116 e-value: 4.8E-27 score: 94.4
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 6..120 score: 37.071793
None	No IPR available	GENE3D	3.40.50.2300		coord: 5..144 e-value: 3.3E-33 score: 117.7
None	No IPR available	PIRSR	PIRSR026389-4	PIRSR026389-4	coord: 6..120 e-value: 1.7E-5 score: 21.0
None	No IPR available	PIRSR	PIRSR002937-1	PIRSR002937-1	coord: 5..117 e-value: 3.2E-12 score: 43.9
IPR039420	Transcriptional regulatory protein WalR-like	PANTHER	PTHR48111	REGULATOR OF RPOS	coord: 6..129
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 6..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig100862	contig	L-digitata_M_contig100862:485..934 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig100862.2.1	mRNA_L-digitata_M_contig100862.2.1	Laminaria digitata LdigPH10_18mv male	mRNA	L-digitata_M_contig100862 485..934 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-digitata_M_contig100862.2.1 ID=prot_L-digitata_M_contig100862.2.1|Name=mRNA_L-digitata_M_contig100862.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=150bp
MNEASTILVADDDRAVRTVLERALTRQGYDVRLTSNARTLWSWVADGEGD
LVITDVVMPDENGLDLVPRIREIRPELKIIVMSAQSTLLTAVKANERGAY
EYLPKPFDLTELMSVVERGLLDPSEVNIATPLDGEEKLPLIGRSVAMQNI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR039420	WalR-like
IPR011006	CheY-like_superfamily