prot_L-digitata_M_contig100835.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100835.1.1
Unique Nameprot_L-digitata_M_contig100835.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length133
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100835.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011936Myxococcus cysteine-rich repeatTIGRFAMTIGR02232TIGR02232coord: 2..26
e-value: 8.7E-7
score: 26.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 39..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100835contigL-digitata_M_contig100835:38..436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100835.1.1mRNA_L-digitata_M_contig100835.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100835 38..463 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100835.1.1 ID=prot_L-digitata_M_contig100835.1.1|Name=mRNA_L-digitata_M_contig100835.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=133bp
MEQCDDKNFLPNDGCTSCMIDPGWVCVLAPSRCTDGPLVQYVDGANPNCD
EGDDENGEPWCFIDDALDESPDPELVLVSPGSYLEALVIDSGTEVLLHAP
QGATISDSGVSVLVRSGGRAIVPGFAPEAGVTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011936Myxo_disulph_rpt
IPR011050Pectin_lyase_fold/virulence