prot_L-digitata_M_contig100822.3.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100822.3.1
Unique Nameprot_L-digitata_M_contig100822.3.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length305
Homology
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Match: A0A6N7F7E7_9PROT (ZnMc domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F7E7_9PROT)

HSP 1 Score: 87.8 bits (216), Expect = 1.630e-15
Identity = 51/91 (56.04%), Postives = 62/91 (68.13%), Query Frame = 0
Query:  120 FSAGFGADTISDFTAGF---DSIDLQALDLADFNALLAATADVSGNAVITLSGNTITLTGVTKSQLLQSDFVGVNPVGTSGNDVINGFDTD 207
            F AGFG DTI DFTAG    D ID+    ++ F++LL + AD+ GNAVITLSGNTITLTGVTKS L   DFV +   GT  +D ++G D D
Sbjct:  514 FGAGFGDDTIGDFTAGAAGDDRIDITWFGISSFSSLLDSIADIGGNAVITLSGNTITLTGVTKSVLHADDFVDIENGGTPDHDTLSGGDGD 604          
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Match: A0A6N7F4Q4_9PROT (Type I secretion C-terminal target domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F4Q4_9PROT)

HSP 1 Score: 65.5 bits (158), Expect = 3.960e-8
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 0
Query:  120 FSAGFGADTISDFTAGFDSIDLQALDLADFNALLAATADVSGNAVITLSGNTITLTGVTKSQLLQSDFVGVNP----------VGTSGNDVI 201
            F+ G  +DT+ DFTAG D IDL A ++ DF+ LL   AD  G  VI+L G TITL G+T + L  +DF+              VGT+G+D I
Sbjct:  402 FAPGAESDTVLDFTAGIDVIDLAAFEITDFDTLLEMAADTRGGTVISLDGATITLKGMTVADLRPADFLLAENQGAVSESGPIVGTAGDDTI 493          
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Match: A0A4Q4CKC0_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Acetobacteraceae bacterium TaxID=1909293 RepID=A0A4Q4CKC0_9PROT)

HSP 1 Score: 60.5 bits (145), Expect = 1.970e-7
Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 0
Query:  123 GFGADTISDFTAGFDSIDLQALDLADFNALLAATADVSGNAVITLS-GNTITLTGVTKSQLLQSDFV 188
            G GADTI DFT G D +DL AL  A F A+LAAT D  G AVI    G+ ++L G+ K+ LL  DF+
Sbjct:  109 GAGADTIGDFTPGLDRLDLAALGFAGFAAVLAATTDHGGTAVIDCGQGDEVSLQGIAKAALLAGDFL 175          
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Match: A0A0Q7YHS3_9SPHN (Peptidase_S8 domain-containing protein n=3 Tax=unclassified Sphingopyxis TaxID=2614943 RepID=A0A0Q7YHS3_9SPHN)

HSP 1 Score: 61.6 bits (148), Expect = 7.380e-7
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 0
Query:  120 FSAGFGADTISDFTAGFDSIDLQALDLADFNALLAATADVSGNAVITLSG-NTITLTGVTKSQLLQSDFVGVNPV--GTSGNDVING 203
            F A  G D I+DF +G D IDL      D+ A++ AT +V GNAVI L G + +TL GVTK+QL   DF+  +P   G +  D++ G
Sbjct:  964 FFADSGQDLITDFLSGTDRIDLSQRGFLDYQAVIDATQNVGGNAVIDLGGGDLVTLRGVTKAQLQSGDFIYASPAAQGAAAGDLLMG 1050          
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Match: UPI001FCCF4CD (hypothetical protein n=1 Tax=Methyloceanibacter caenitepidi TaxID=1384459 RepID=UPI001FCCF4CD)

HSP 1 Score: 56.6 bits (135), Expect = 3.190e-6
Identity = 38/71 (53.52%), Postives = 45/71 (63.38%), Query Frame = 0
Query:  120 FSAGFGADTISDFTAGFDSIDLQALDLADFNALLAATADVS-GNAVITL-SGNTITLTGVTKSQLLQSDFV 188
            F AGFG DTI DFT   D I+  +    D  A+LAATAD   GN V+ L + NT+TL GV K+QL Q DFV
Sbjct:   87 FDAGFGQDTIVDFTPDEDLIEFASGLFVDQAAVLAATADDGLGNTVVALDANNTVTLEGVLKAQLDQDDFV 157          
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Match: A0A4Q0MC38_9HYPH (Plug domain-containing protein n=1 Tax=Hansschlegelia zhihuaiae TaxID=405005 RepID=A0A4Q0MC38_9HYPH)

HSP 1 Score: 58.5 bits (140), Expect = 5.180e-6
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 0
Query:  120 FSAGFGADTISDFTAGF---DSIDLQALDLADFNALLAATADVSGNAVITLSGNT-ITLTGVTKSQLLQSDFV 188
            FS  FG D I+DF AG    D I+  +   A+F A+LAAT DV GNAVIT+ G T +TL GVT++ L  +DF+
Sbjct:  359 FSGSFGNDQITDFQAGAAVGDVIEFSSSQFANFAAVLAATNDVGGNAVITVDGATSVTLIGVTEASLNANDFL 431          
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Match: UPI001AD994EB (hypothetical protein n=1 Tax=Thalassospira sp. A3_1 TaxID=2821088 RepID=UPI001AD994EB)

HSP 1 Score: 58.9 bits (141), Expect = 6.510e-6
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0
Query:  125 GADTISDFTAGFDSIDLQALDLADFNAL--LAATADVSGNAVITLSGNTITLTGVTKSQLLQSDFVGVNPVG-TSGNDVINGFD 205
            G D I+DF    D IDL A D+ ++ AL  L +T D +GNAVIT++GN++TLTG+  S L  S+F G+  +G T  +DVIN  D
Sbjct: 1912 GNDKIADFDVTSDQIDLGAFDIPNWEALKPLISTDD-NGNAVITINGNSLTLTGIPVSALDVSNFSGLETLGATENDDVINATD 1994          
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Match: A0A367UEE8_9PROT (Uncharacterized protein n=1 Tax=Thalassospira xianhensis MCCC 1A02616 TaxID=1177929 RepID=A0A367UEE8_9PROT)

HSP 1 Score: 58.2 bits (139), Expect = 1.160e-5
Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 0
Query:  125 GADTISDFTAGFDSIDLQALDLADFNAL--LAATADVSGNAVITLSGNTITLTGVTKSQLLQSDFVGVNPVG-TSGNDVIN 202
            G D I+DF    D IDL A D+ ++ AL  L +T D +GNAVIT++GN++TLTG+  S L  S+F G+  +G T  +DVIN
Sbjct: 1927 GNDKIADFDVTSDQIDLGAFDIPNWEALKPLISTDD-NGNAVITINGNSLTLTGIPVSALDVSNFSGLETLGATENDDVIN 2006          
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Match: UPI001F100CBF (hypothetical protein n=1 Tax=Roseomonas sp. HF4 TaxID=2562313 RepID=UPI001F100CBF)

HSP 1 Score: 57.0 bits (136), Expect = 2.320e-5
Identity = 34/69 (49.28%), Postives = 40/69 (57.97%), Query Frame = 0
Query:  120 FSAGFGADTISDFTAGFDSIDLQALDLADFNALLAATADVSGNAVITLS-GNTITLTGVTKSQLLQSDF 187
            F  G G D I DFT G D I LQ L  ADF A++AAT D  G A+I  S  + + LTGV K+ L   DF
Sbjct:  961 FGPGSGVDAIRDFTPGTDRILLQGLGFADFAAVMAATRDAGGGAIIDFSPSDAVQLTGVAKAALSAGDF 1029          
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Match: UPI001F39A476 (hypothetical protein n=1 Tax=Acuticoccus sp. M5D2P5 TaxID=2910977 RepID=UPI001F39A476)

HSP 1 Score: 55.5 bits (132), Expect = 3.550e-5
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0
Query:  120 FSAGFGADTISDFTAGFDSIDLQALDLADFNAL-LAATADVSGNAVITLSGNTITLTGVTKSQLLQSDFV 188
            F   FG D I  F +G D IDL+A  + DF+AL LAA  D  G+AV+T+ G+TITLTGV+ + L   DF+
Sbjct:  227 FGETFGNDRIVKFESGLDLIDLRAHGIDDFDALDLAANGD--GDAVVTIDGDTITLTGVSVTALTSDDFL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100822.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6N7F7E7_9PROT1.630e-1556.04ZnMc domain-containing protein n=1 Tax=Alphaproteo... [more]
A0A6N7F4Q4_9PROT3.960e-843.48Type I secretion C-terminal target domain-containi... [more]
A0A4Q4CKC0_9PROT1.970e-752.24Uncharacterized protein (Fragment) n=1 Tax=Acetoba... [more]
A0A0Q7YHS3_9SPHN7.380e-743.68Peptidase_S8 domain-containing protein n=3 Tax=unc... [more]
UPI001FCCF4CD3.190e-653.52hypothetical protein n=1 Tax=Methyloceanibacter ca... [more]
A0A4Q0MC38_9HYPH5.180e-650.68Plug domain-containing protein n=1 Tax=Hansschlege... [more]
UPI001AD994EB6.510e-647.62hypothetical protein n=1 Tax=Thalassospira sp. A3_... [more]
A0A367UEE8_9PROT1.160e-548.15Uncharacterized protein n=1 Tax=Thalassospira xian... [more]
UPI001F100CBF2.320e-549.28hypothetical protein n=1 Tax=Roseomonas sp. HF4 Ta... [more]
UPI001F39A4763.550e-550.00hypothetical protein n=1 Tax=Acuticoccus sp. M5D2P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00313CABNDNGRPTcoord: 239..247
score: 53.66
coord: 248..257
score: 49.27
coord: 99..110
score: 46.54
coord: 221..229
score: 66.94
NoneNo IPR availablePANTHERPTHR38340S-LAYER PROTEINcoord: 136..274
coord: 30..166
IPR011049Serralysin-like metalloprotease, C-terminalGENE3D2.150.10.10coord: 80..186
e-value: 3.5E-23
score: 84.4
IPR011049Serralysin-like metalloprotease, C-terminalGENE3D2.150.10.10coord: 1..79
e-value: 2.1E-9
score: 39.4
IPR011049Serralysin-like metalloprotease, C-terminalSUPERFAMILY51120beta-Rollcoord: 193..296
IPR011049Serralysin-like metalloprotease, C-terminalSUPERFAMILY51120beta-Rollcoord: 5..183
IPR001343RTX calcium-binding nonapeptide repeatPFAMPF00353HemolysinCabindcoord: 221..254
e-value: 1.1E-8
score: 34.9
coord: 84..117
e-value: 3.9E-10
score: 39.5
coord: 40..73
e-value: 4.2E-8
score: 33.0
coord: 193..219
e-value: 5.1E-5
score: 23.2
IPR018511Hemolysin-type calcium-binding conserved sitePROSITEPS00330HEMOLYSIN_CALCIUMcoord: 217..235
IPR018511Hemolysin-type calcium-binding conserved sitePROSITEPS00330HEMOLYSIN_CALCIUMcoord: 89..107
IPR018511Hemolysin-type calcium-binding conserved sitePROSITEPS00330HEMOLYSIN_CALCIUMcoord: 98..116
IPR018511Hemolysin-type calcium-binding conserved sitePROSITEPS00330HEMOLYSIN_CALCIUMcoord: 226..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100822contigL-digitata_M_contig100822:1..915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100822.3.1mRNA_L-digitata_M_contig100822.3.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100822 1..924 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100822.3.1 ID=prot_L-digitata_M_contig100822.3.1|Name=mRNA_L-digitata_M_contig100822.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=305bp
MADVSGNAVLTLGSDTITLTGVASSDLHVDDYFGVMAGPTSGDDTLLGTS
GNDTIDGLAGNDSIGGNGGNDFLRGGAGDDAVSGNAGDDTLYGDAGSDIL
NGGAGDDTLIGGAGRDTYTFSAGFGADTISDFTAGFDSIDLQALDLADFN
ALLAATADVSGNAVITLSGNTITLTGVTKSQLLQSDFVGVNPVGTSGNDV
INGFDTDDTINGLAGNDIINGGAGDDTLNGGDGDDRLVGGAGADVMTGGN
GDDTYLVDNVGDTVTEGSIASTDTVISSISFTLGDHVENLELSLSSNIDG
TGNNL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011049Serralysin-like_metalloprot_C
IPR001343Hemolysn_Ca-bd
IPR018511Hemolysin-typ_Ca-bd_CS