prot_L-digitata_M_contig10080.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10080.1.1
Unique Nameprot_L-digitata_M_contig10080.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length170
Homology
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BLAST of mRNA_L-digitata_M_contig10080.1.1 vs. uniprot
Match: D7FKI1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI1_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 7.440e-11
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 0 
Query:   76 LQQP-QQAQPTPTSTWFKLNPFHSTQVPPALMVRGGGGAATSNTAKTQRIYDRIAVLLNKRFFLLGAVAMVSAARLAPAPGATGGLLRPELTVNKA 170
            +Q+P QQ+ P   + W +L      +  PAL+ RGG  A  S T   +  YD++   LNKRFFLLGA AMV+AAR+ P+PG TGGLL   L+V+KA
Sbjct:    3 VQRPKQQSHPGQHNNWLRLG-SGCNKYNPALVTRGG--ADVSKTQPERSPYDQLKAFLNKRFFLLGAAAMVAAARVVPSPGTTGGLL--SLSVSKA 93
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10080.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKI1_ECTSI7.440e-1147.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10080contigL-digitata_M_contig10080:752..1261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10080.1.1mRNA_L-digitata_M_contig10080.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10080 752..1292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10080.1.1 ID=prot_L-digitata_M_contig10080.1.1|Name=mRNA_L-digitata_M_contig10080.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=170bp
MRVVLVFSGIAVATAFPAKIALSHRSTCHATASSSAFTSTAADDVPVSLK
AGQGLSAHNNVHHRRQHGGSTALGLLQQPQQAQPTPTSTWFKLNPFHSTQ
VPPALMVRGGGGAATSNTAKTQRIYDRIAVLLNKRFFLLGAVAMVSAARL
APAPGATGGLLRPELTVNKA
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