prot_L-digitata_M_contig100717.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100717.1.1
Unique Nameprot_L-digitata_M_contig100717.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length197
Homology
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BLAST of mRNA_L-digitata_M_contig100717.1.1 vs. uniprot
Match: A0A2E8DAA1_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8DAA1_9PLAN)

HSP 1 Score: 119 bits (299), Expect = 3.970e-28
Identity = 83/221 (37.56%), Postives = 119/221 (53.85%), Query Frame = 0 
Query:    1 EFRLIVTGGSGAAGWRATQPSRFMSSILEQNFSRSASCSDTRQLRVINLAMGGSQSYQNYIALNRWGQKLAPDMILSYSGFNDMNVPWFSGG--DGFRDFEVLIAFNRVARYSESPDWLKFLGRWYPGLVRETGLGPAIRSMEIKSQA-ARAKADYLSRFPTVP-------KTADRVVQELS-------------IPQF-THAVQSMKRDFNGIPIAVAFQ 197
            E+R+I+ GGSGA GW A    + +   LE+  +R    S  R ++VIN+AMG S +YQNYIALNRWG +L PD+ILSYSG ND  VP       D    F  L A    +R SE    L+++ R +P ++ +T +G +++ +   S   ARA   Y       P       + A   V+E+S             + +F  HA++S+KRDF GIPI +A+Q
Sbjct:  200 EYRIILIGGSGAQGWGAQSNDKMLYRQLERRLNRITKESGPR-VQVINMAMGASITYQNYIALNRWGHRLEPDLILSYSGRNDFVVPLHHEHLPDTHYFFTGLNALVYASRGSEYGAKLQWMARLFPNIMNKTNVGLSLKILAEHSHFYARAHRGYRGSRGLPPAEIVWSGRGAGYSVKEVSSKGGELRRMLDEEVSEFYAHALKSIKRDFEGIPIMLAWQ 419
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100717.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E8DAA1_9PLAN3.970e-2837.56Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036514SGNH hydrolase superfamilyGENE3D3.40.50.1110SGNH hydrolasecoord: 3..189
e-value: 1.0E-6
score: 30.7
NoneNo IPR availableSUPERFAMILY52266SGNH hydrolasecoord: 2..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100717contigL-digitata_M_contig100717:2..592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100717.1.1mRNA_L-digitata_M_contig100717.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100717 2..592 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100717.1.1 ID=prot_L-digitata_M_contig100717.1.1|Name=mRNA_L-digitata_M_contig100717.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=197bp
EFRLIVTGGSGAAGWRATQPSRFMSSILEQNFSRSASCSDTRQLRVINLA
MGGSQSYQNYIALNRWGQKLAPDMILSYSGFNDMNVPWFSGGDGFRDFEV
LIAFNRVARYSESPDWLKFLGRWYPGLVRETGLGPAIRSMEIKSQAARAK
ADYLSRFPTVPKTADRVVQELSIPQFTHAVQSMKRDFNGIPIAVAFQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036514SGNH_hydro_sf