prot_L-digitata_M_contig100713.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100713.1.1
Unique Nameprot_L-digitata_M_contig100713.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length48
Homology
BLAST of mRNA_L-digitata_M_contig100713.1.1 vs. uniprot
Match: D7G4Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z8_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 4.860e-14
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    4 EMYHVTTREFNTEMQKVIRNAVIPIVHFNVDLWTSRVSGLKFIG 47
            +MYHVTTREFN  MQK +RNA IPI++ N DLWTS VSGLK+IG
Sbjct:  122 KMYHVTTREFNASMQKTLRNATIPILYVNCDLWTSHVSGLKYIG 165          
BLAST of mRNA_L-digitata_M_contig100713.1.1 vs. uniprot
Match: D7G3L2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L2_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.690e-13
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    4 EMYHVTTREFNTEMQKVIRNAVIPIVHFNVDLWTSRVSGLKFIG 47
            EMYH TT+EFN  MQK +RNA IPI++ N DLWTS VSGLK+IG
Sbjct:  122 EMYHATTQEFNASMQKTLRNATIPILYVNCDLWTSHVSGLKYIG 165          
BLAST of mRNA_L-digitata_M_contig100713.1.1 vs. uniprot
Match: A0A6H5L6Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z1_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 3.430e-11
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MMIEMYHVTTREFNTEMQKVIRNAVIPIVHFNVDLWTSRVSGLKFIG 47
            M++EMY  TTR FN+E+ K +R A+IPI++ N DLWTSRVSG K+IG
Sbjct:  259 MIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYIG 305          
BLAST of mRNA_L-digitata_M_contig100713.1.1 vs. uniprot
Match: A0A6H5KX27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX27_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 3.430e-11
Identity = 29/47 (61.70%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MMIEMYHVTTREFNTEMQKVIRNAVIPIVHFNVDLWTSRVSGLKFIG 47
            M++EMY  TTR FN+E+ K +R A+IPI++ N DLWTSRVSG K+IG
Sbjct:  180 MIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYIG 226          
BLAST of mRNA_L-digitata_M_contig100713.1.1 vs. uniprot
Match: A0A6H5JP19_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP19_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 1.950e-6
Identity = 21/46 (45.65%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 MMIEMYHVTTREFNTEMQKVIRNAVIPIVHFNVDLWTSRVSGLKFI 46
            M++EMY+ T +  N ++Q+ +  A+IPI++ N D+WT++VSG KFI
Sbjct:    1 MIVEMYNATLKVVNKDLQRQLALAIIPILYANCDIWTTKVSGEKFI 46          
BLAST of mRNA_L-digitata_M_contig100713.1.1 vs. uniprot
Match: A0A6H5JXM2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM2_9PHAE)

HSP 1 Score: 47.8 bits (112), Expect = 7.200e-6
Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = 0
Query:    1 MMIEMYHVTTREFNTEMQKVIRNAVIPIVHFNVDLWTSRVSGLKFI 46
            +++EM+  T       M + I+ A +PIVH+ VDLWT + SG+KFI
Sbjct:   22 LLVEMFVATKTAVMGNMSEEIKKAPLPIVHYGVDLWTCKTSGMKFI 67          
BLAST of mRNA_L-digitata_M_contig100713.1.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE)

HSP 1 Score: 48.1 bits (113), Expect = 3.570e-5
Identity = 20/46 (43.48%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 MMIEMYHVTTREFNTEMQKVIRNAVIPIVHFNVDLWTSRVSGLKFI 46
            +++EM+  T +     M + I+ A +PIVH+ VDLWT + SG+KFI
Sbjct:   42 LLVEMFVATKKAVMGNMLEEIKKAPLPIVHYGVDLWTCKTSGMKFI 87          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100713.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G4Z8_ECTSI4.860e-1472.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3L2_ECTSI1.690e-1370.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6Z1_9PHAE3.430e-1161.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX27_9PHAE3.430e-1161.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP19_9PHAE1.950e-645.65Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXM2_9PHAE7.200e-643.48Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVT2_9PHAE3.570e-543.48Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100713contigL-digitata_M_contig100713:759..902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100713.1.1mRNA_L-digitata_M_contig100713.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100713 759..902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100713.1.1 ID=prot_L-digitata_M_contig100713.1.1|Name=mRNA_L-digitata_M_contig100713.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=48bp
MMIEMYHVTTREFNTEMQKVIRNAVIPIVHFNVDLWTSRVSGLKFIG*
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