prot_L-digitata_M_contig100672.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100672.2.1
Unique Nameprot_L-digitata_M_contig100672.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length107
Homology
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BLAST of mRNA_L-digitata_M_contig100672.2.1 vs. uniprot
Match: A0A6M4H5D7_9PROT (Uncharacterized protein n=1 Tax=Usitatibacter palustris TaxID=2732487 RepID=A0A6M4H5D7_9PROT)

HSP 1 Score: 52.4 bits (124), Expect = 3.720e-6
Identity = 29/66 (43.94%), Postives = 37/66 (56.06%), Query Frame = 0 
Query:   24 ANAFCVYNAKNSDRTVIIAQLQKGGDDFRGSSPNLSAFSHGGSTWFVATLAPGGKSCCNWKNRDCN 89
            A+AFCVYN   SD++V  +Q    G  F+G               F  T+ PGGK+CCN+KNRDCN
Sbjct:   18 ASAFCVYNY--SDKSVKFSQDSASGIPFKG---------------FSKTVDPGGKACCNYKNRDCN 66
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100672.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6M4H5D7_9PROT3.720e-643.94Uncharacterized protein n=1 Tax=Usitatibacter palu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100672contigL-digitata_M_contig100672:569..889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100672.2.1mRNA_L-digitata_M_contig100672.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100672 569..889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100672.2.1 ID=prot_L-digitata_M_contig100672.2.1|Name=mRNA_L-digitata_M_contig100672.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=107bp
MTRISKFVLISAILLMTLVVPRLANAFCVYNAKNSDRTVIIAQLQKGGDD
FRGSSPNLSAFSHGGSTWFVATLAPGGKSCCNWKNRDCNNGARGTSLIFS
AIDQAKN
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