prot_L-digitata_M_contig100449.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100449.1.1
Unique Nameprot_L-digitata_M_contig100449.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length66
Homology
BLAST of mRNA_L-digitata_M_contig100449.1.1 vs. uniprot
Match: H6WB86_VAULI (Threonine--tRNA ligase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB86_VAULI)

HSP 1 Score: 68.2 bits (165), Expect = 8.380e-12
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    8 LLLTK-EALDVFHYNAFNLQETSLLYIATRIPDGGCTTVYRNGDFVFSLISPHLPSTTLI 66
            L+LTK EALD+F YN F +Q     YI T+IPDG CTTVY+NGDF+     PH+P +T+I
Sbjct:  266 LMLTKDEALDMFKYNPFKVQ-----YIQTKIPDGSCTTVYKNGDFIDLCRGPHVPQSTMI 320          
BLAST of mRNA_L-digitata_M_contig100449.1.1 vs. uniprot
Match: D8LFY0_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY0_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.560e-11
Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    8 LLLTKE-ALDVFHYNAFNLQETSLLYIATRIPDGGCTTVYRNGDFVFSLISPHLPSTTLI 66
            L+LTKE ALD+F YNAF  +     YI TRIPDGG TTVYRNGDFV     PH+P +T+I
Sbjct:  293 LVLTKEEALDMFDYNAFKKE-----YINTRIPDGGSTTVYRNGDFVDLCRGPHVPYSTMI 347          
BLAST of mRNA_L-digitata_M_contig100449.1.1 vs. uniprot
Match: A0A835YMV8_9STRA (Threonine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.610e-10
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   12 KEALDVFHYNAFNLQETSLLYIATRIPDGGCTTVYRNGDFVFSLISPHLPSTTLI 66
            +EAL++F YN F  Q     YI TRIP+GGCTTVY+NG+F+     PH+P +T+I
Sbjct:  269 EEALEMFKYNPFKAQ-----YIQTRIPEGGCTTVYKNGEFIDLCRGPHVPYSTMI 318          
BLAST of mRNA_L-digitata_M_contig100449.1.1 vs. uniprot
Match: A0A8J8P0U6_HALGN (Threonine--tRNA ligase n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P0U6_HALGN)

HSP 1 Score: 54.3 bits (129), Expect = 6.500e-7
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    7 VLLLTKEALDVFHYNAFNLQETSLLYIATRIPDGGCTTVYRNGDFVFSLISPHLPST 63
            ++L  +EAL +F YN F +Q      IAT+IPDGG  T YRNGD +     PH+P+T
Sbjct:  239 IILSKEEALRLFAYNPFKVQ-----LIATKIPDGGKVTAYRNGDLIDLCTGPHVPNT 290          
BLAST of mRNA_L-digitata_M_contig100449.1.1 vs. uniprot
Match: W7TCM5_9STRA (Threonine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCM5_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.270e-6
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    8 LLLTK-EALDVFHYNAFNLQETSLLYIATRIPDGGCTTVYRNGDFVFSLISPHLPST 63
            L++TK EAL +F YNAF   +TS+  I+++IP+GG TTVYRNGD +     PH+P T
Sbjct:  267 LVVTKAEALALFKYNAF---KTSI--ISSKIPEGGYTTVYRNGDLIDLCRGPHVPHT 318          
BLAST of mRNA_L-digitata_M_contig100449.1.1 vs. uniprot
Match: A0A1E3P1A3_WICAA (Threonine--tRNA ligase n=1 Tax=Wickerhamomyces anomalus (strain ATCC 58044 / CBS 1984 / NCYC 433 / NRRL Y-366-8) TaxID=683960 RepID=A0A1E3P1A3_WICAA)

HSP 1 Score: 48.1 bits (113), Expect = 9.740e-5
Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    8 LLLTKE-ALDVFHYNAFNLQETSLLYIATRIPDGGCTTVYRNGDFVFSLISPHLPST 63
            L+++KE  L +FHY+ +   +T L  + T++PDGG TT+YRNG  +   + PH+P T
Sbjct:  215 LVVSKENLLKMFHYSKY---KTYL--VQTKVPDGGSTTIYRNGPLIDLCVGPHIPHT 266          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100449.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
H6WB86_VAULI8.380e-1256.67Threonine--tRNA ligase n=1 Tax=Vaucheria litorea T... [more]
D8LFY0_ECTSI1.560e-1161.67Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
A0A835YMV8_9STRA2.610e-1052.73Threonine--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
A0A8J8P0U6_HALGN6.500e-747.37Threonine--tRNA ligase n=1 Tax=Halteria grandinell... [more]
W7TCM5_9STRA2.270e-652.63Threonine--tRNA ligase n=2 Tax=Monodopsidaceae Tax... [more]
A0A1E3P1A3_WICAA9.740e-542.11Threonine--tRNA ligase n=1 Tax=Wickerhamomyces ano... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100449contigL-digitata_M_contig100449:265..897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100449.1.1mRNA_L-digitata_M_contig100449.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100449 265..897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100449.1.1 ID=prot_L-digitata_M_contig100449.1.1|Name=mRNA_L-digitata_M_contig100449.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=66bp
MLLVLVVLLLTKEALDVFHYNAFNLQETSLLYIATRIPDGGCTTVYRNGD
FVFSLISPHLPSTTLI
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