prot_L-digitata_M_contig100441.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-digitata_M_contig100441.1.1
Unique Name	prot_L-digitata_M_contig100441.1.1
Type	polypeptide
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length	102

Homology

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BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Match: A0A6H5JX12_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX12_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.250e-55
Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 0

Query:    6 QIEGVTFGYDAANPLFSNVHFGVDLDSRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 101
            QIEGVTFGYDA NPLFSNVHFGVDLDSR+GIVGPNGAGKSTLLNLILDKLRPL GEVRRN NLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ
Sbjct:  286 QIEGVTFGYDARNPLFSNVHFGVDLDSRVGIVGPNGAGKSTLLNLILDKLRPLSGEVRRNPNLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 381

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BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Match: D8LTY8_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY8_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 1.830e-54
Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 0

Query:    6 QIEGVTFGYDAANPLFSNVHFGVDLDSRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 101
            QIEGVTFGYDA NPLFSNVHFGVDLDSR+GIVGPNGAGKSTLLNLILDKLRPL GEVRRN NLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ
Sbjct:  479 QIEGVTFGYDAGNPLFSNVHFGVDLDSRVGIVGPNGAGKSTLLNLILDKLRPLSGEVRRNPNLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 574

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BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Match: A0A836CKX3_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX3_9STRA)

HSP 1 Score: 138 bits (348), Expect = 5.660e-36
Identity = 66/96 (68.75%), Postives = 82/96 (85.42%), Query Frame = 0

Query:    7 IEGVTFGYDAANPL-FSNVHFGVDLDSRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 101
            +EGV+FGYDA + L F NVHFGVD++SRI IVGPNGAGKSTLLN+++DKL+P+ G V RN  L+IA FTQH AEQFDYRLN+VDNM++++P V EQ
Sbjct:  519 VEGVSFGYDAVHGLLFQNVHFGVDMESRIAIVGPNGAGKSTLLNVMMDKLKPVSGYVHRNPQLKIAAFTQHHAEQFDYRLNAVDNMLRMWPKVPEQ 614

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BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Match: A0A7S2XYX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYX4_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.050e-32
Identity = 61/99 (61.62%), Postives = 79/99 (79.80%), Query Frame = 0

Query:    6 QIEGVTFGY----DAANPLFSNVHFGVDLDSRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQE 100
            Q+E +TFGY    D  + LF NV+FG+DL SRIGIVGPNG+GKSTLLNLILDKL P+ G V ++ NLRIA FTQH AEQFDYR++++ N+++++P  QE
Sbjct:  140 QVEDITFGYGGEGDPDSFLFRNVNFGIDLKSRIGIVGPNGSGKSTLLNLILDKLEPVHGLVHQHNNLRIAAFTQHHAEQFDYRMSALLNLMRIYPKEQE 238

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BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Match: A0A7S3XXA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXA7_HETAK)

HSP 1 Score: 120 bits (302), Expect = 7.120e-31
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 0

Query:    6 QIEGVTFGYDAANP-LFSNVHFGVDLDSRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 101
            Q+EG+TFGY   +  LF +VHF +DL SRIGI+G NG+GKSTLLNLILD+L P  G V R+ NLR+A FTQH AEQF+YRL ++ N++ +FP   EQ
Sbjct:  138 QVEGITFGYGGEDSILFRDVHFSIDLKSRIGILGANGSGKSTLLNLILDQLHPKAGFVHRHGNLRVAAFTQHHAEQFNYRLTALQNLLNIFPSENEQ 234

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BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Match: A0A7S3Q841_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q841_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.130e-27
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = 0

Query:    7 IEGVTFGYDA----ANPLFSNVHFGVDLDSRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 101
            I+ V+F Y      A  +   V+FGVDLDSRIGI+G NGAGKSTLLNLI DKL+PL G V RN  LRI  FTQH+A++FD RL+SV+NM+ LFP   +Q
Sbjct:  575 IDDVSFDYHKSKKEAEYILQKVNFGVDLDSRIGILGANGAGKSTLLNLITDKLQPLSGSVSRNGRLRIGMFTQHSADKFDLRLSSVENMLALFPDATDQ 673

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BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Match: A0A7S2IBD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBD8_9STRA)

HSP 1 Score: 109 bits (273), Expect = 8.670e-26
Identity = 50/82 (60.98%), Postives = 67/82 (81.71%), Query Frame = 0

Query:   20 LFSNVHFGVDLDSRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 101
            L  +V+FG+DLDSRIGI+G NGAGKSTLLNLI+DKL+P RG + RN  LR+ HFTQH+A++FD +L++V+NM+  F G  +Q
Sbjct:  583 LLRDVNFGIDLDSRIGILGANGAGKSTLLNLIMDKLQPTRGSISRNGRLRVGHFTQHSADKFDLQLSAVENMMATFEGRGDQ 664

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BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Match: A0A7S1YRA7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YRA7_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.150e-25
Identity = 50/82 (60.98%), Postives = 65/82 (79.27%), Query Frame = 0

Query:   20 LFSNVHFGVDLDSRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 101
            L  +V+FG+DLDSRIGI+G NGAGKSTLLNLI+DKL P  G + RN  LRI HFTQH+A++FD +L++V+NM+  F G  +Q
Sbjct:  166 LLQDVNFGIDLDSRIGILGANGAGKSTLLNLIMDKLEPTSGSISRNGRLRIGHFTQHSADKFDLQLSAVENMMASFEGRGDQ 247

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BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Match: A0A7S4RCN1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RCN1_9STRA)

HSP 1 Score: 107 bits (268), Expect = 4.210e-25
Identity = 50/82 (60.98%), Postives = 65/82 (79.27%), Query Frame = 0

Query:   20 LFSNVHFGVDLDSRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 101
            L  +V+FG+DLDSRIGI+G NGAGKSTLLNLI+DKL P  G + RN  LRI HFTQH+A++FD +L++V+NM+  F G  +Q
Sbjct:  573 LLQDVNFGIDLDSRIGILGANGAGKSTLLNLIMDKLEPTSGSISRNGRLRIGHFTQHSADKFDLQLSAVENMMATFEGRGDQ 654

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BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Match: W7U344_9STRA (Abc transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U344_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.740e-25
Identity = 52/82 (63.41%), Postives = 63/82 (76.83%), Query Frame = 0

Query:   20 LFSNVHFGVDLDSRIGIVGPNGAGKSTLLNLILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQEQ 101
            LF NV FGVDL++RIG+VG NGAGKSTLLNLILDKLRP  G + R+ NLR+A FTQH  +QFD RL++V+N   +FP    Q
Sbjct:  572 LFENVDFGVDLETRIGVVGANGAGKSTLLNLILDKLRPTEGHIFRHHNLRLASFTQHHGDQFDLRLSAVENFESMFPKSDTQ 653

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig100441.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JX12_9PHAE	1.250e-55	95.83	ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D8LTY8_ECTSI	1.830e-54	95.83	ABC transporter domain-containing protein n=1 Tax=...	[more]
A0A836CKX3_9STRA	5.660e-36	68.75	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A7S2XYX4_9STRA	2.050e-32	61.62	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S3XXA7_HETAK	7.120e-31	59.79	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S3Q841_9STRA	2.130e-27	59.60	Hypothetical protein (Fragment) n=1 Tax=Chaetocero...	[more]
A0A7S2IBD8_9STRA	8.670e-26	60.98	Hypothetical protein (Fragment) n=1 Tax=Helicothec...	[more]
A0A7S1YRA7_9STRA	1.150e-25	60.98	Hypothetical protein (Fragment) n=2 Tax=Ditylum br...	[more]
A0A7S4RCN1_9STRA	4.210e-25	60.98	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
W7U344_9STRA	5.740e-25	63.41	Abc transporter n=2 Tax=Monodopsidaceae TaxID=4250...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 22..96 e-value: 3.8E-12 score: 46.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..87 e-value: 3.3E-20 score: 74.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..83
None	No IPR available	PANTHER	PTHR19211	ATP-BINDING TRANSPORT PROTEIN-RELATED	coord: 6..101
None	No IPR available	PANTHER	PTHR19211:SF45	ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 3	coord: 6..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig100441	contig	L-digitata_M_contig100441:161..466 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig100441.1.1	mRNA_L-digitata_M_contig100441.1.1	Laminaria digitata LdigPH10_18mv male	mRNA	L-digitata_M_contig100441 161..466 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-digitata_M_contig100441.1.1 ID=prot_L-digitata_M_contig100441.1.1|Name=mRNA_L-digitata_M_contig100441.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=102bp
QKCRFQIEGVTFGYDAANPLFSNVHFGVDLDSRIGIVGPNGAGKSTLLNL
ILDKLRPLRGEVRRNANLRIAHFTQHAAEQFDYRLNSVDNMIKLFPGVQE
QV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003439	ABC_transporter-like_ATP-bd
IPR027417	P-loop_NTPase