prot_L-digitata_M_contig100427.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100427.1.1
Unique Nameprot_L-digitata_M_contig100427.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length313
Homology
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Match: A0A7V2Q9S5_9CHLR (Histidine kinase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7V2Q9S5_9CHLR)

HSP 1 Score: 121 bits (303), Expect = 8.120e-27
Identity = 84/267 (31.46%), Postives = 138/267 (51.69%), Query Frame = 0
Query:   45 SDGDTLWHGITTDITDRQLQQLAVEESKERLRLQMEYAPDAILTFDPGLNCFVDANPQAASMFEMPREQLLQLSWRDLSPRVQPGGSVPSEVGHEWVRRAHAGESVTFQWVFQLRSGSTFSGEVRLNQMPHHGVQLVRVSITDISARLEKEKLLRTSEERLMQAIRCTHAGIFDHDHIHGTVYWSPELYRIYDVEPSTPG-SLAILNQRLHPDD---REAVAAGLAKAGDPQNEGRFDGQHRIVWRNGEVRRLSARSQTLFTTVDGA 307
            S G+    G   DIT+R+  + A+ ES+ER R   ++AP+ ++  D     F D N +A  +F   R++LL++    +S  VQP G    EV  E ++ A AG S   + ++   SG+ F  +V++ ++P     LVRVS +DI+ R++ E++LR +EERL  A+  ++AG+++        ++    + + D EP     S A     LHPDD    EA+      AGD      F  + R+  + G+ R L +  +T+  T DGA
Sbjct:  870 SAGNVRTVGQLLDITERKQAEEAIRESEERFRTLFDFAPEGVMVIDVDKLAFDDVNERALELFGYTRKELLEIGPLAVSAEVQPDGRSAMEVMGEAIQGAMAGGSPRLEAMYVRSSGAEFPVDVQVVKLPEADRNLVRVSFSDITERVQAEQVLRENEERLDLAMEASNAGVWEFWPQDDKAFFDDRWFAMLDYEPGELAQSYATWRSLLHPDDVEPTEAIVFAAVGAGDD-----FGAEFRMKTKGGDWRWLYSIGKTIERTEDGA 1131          
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Match: A0A0G3BCW8_9BURK (Histidine kinase n=2 Tax=Schlegelella brevitalea TaxID=413882 RepID=A0A0G3BCW8_9BURK)

HSP 1 Score: 111 bits (278), Expect = 1.490e-23
Identity = 91/278 (32.73%), Postives = 132/278 (47.48%), Query Frame = 0
Query:   48 DTLWHGITTDITDRQLQQLAVEESKERLRLQMEYAPDAILTFDPGLNCFVDA-------NPQAASMFEMPREQLLQLSWRDLSPRVQPGGSVPSEVGHEWVRRAHAGESVTFQW-VFQLRSGSTFSGEVRLNQMPH----HGVQLVRVSITDISARLEKEKLLRTSEERLMQAIRCTHAGIFDHDHIHGTVYWSPELYRIYDVEPSTPGSLAILNQRLHPDDREAVAAGLAKAGDPQNEGRFDGQHRIVWRNGEVRRLSARSQTLFTTVDGARVPSRT 313
            D L H   T + + Q  Q      ++RL L  E  P  I+   P L  +VDA       N      F  PR  +     RD++      G    +    ++  A AG++V+ +  +   R+G  +   V +  +PH      V  V + + DI+A  E    LR +EERL QA+R    G+FDHDH+ G ++WSP +  I+D  P  P  L  +  R+HPDDREA  A L  A DP   G F   +R++  +G+ R +SAR+QT F     AR   RT
Sbjct:  342 DELEHRAATAVAEAQEAQEQAARLQQRL-LAEELLP-LIIDNLPVLISYVDAEGVYRLNNRAYERWFGEPRSNITGRHVRDVA------GEAAWQTLRPYMEAALAGQAVSCEHQIAYPRAGKRW---VAITYVPHLTAAGSVLGVAILVHDITAHREALDELRRAEERLTQAVRAAGVGVFDHDHVSGELHWSPVIRAIHDWPPDRPPQLDSVLARVHPDDREAHLAALRSAHDPNGNGVFASDYRVLRADGKTRWISARAQTFFKGEGAARRAIRT 608          
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Match: UPI001669E069 (PAS domain S-box protein n=1 Tax=Hymenobacter glacieicola TaxID=1562124 RepID=UPI001669E069)

HSP 1 Score: 110 bits (274), Expect = 4.500e-23
Identity = 75/251 (29.88%), Postives = 121/251 (48.21%), Query Frame = 0
Query:   47 GDTLWHGITTDITDRQLQQLAVEESKERLRLQMEYAPDAILTFDPGLNCFVDANPQAASMFEM-PREQLLQLSWRDLSPRVQPGGSVPSEVGHEWVRRAHAGESVTFQWVFQLRSGSTFSGEVRLNQMPHHGVQLVRVSITDISARLEKEKLLRTSEERLMQAIRCTHAGIFDHDHIHGTVYWSPELYRIY-DVEPSTPGSLAILNQRLHPDDREAVAAGLAKAGDPQNEGRFDGQHRIVWRNGEVRRLSA 295
            G+ L      DIT+++  +  +E S+ R R+  + + D +L      N FVD NP    +  +  + QL+       SP  QP G +   +  ++   A       F+W     +G  F  +V L  +P     +V  S  DI+A  E  +L+R SEE+L  A+  + AG++  +++   + W+     I    E  +P  L  L Q +HPDDREAVAA L +A     E   D +HR++W +G +R +SA
Sbjct:  176 GNQLCRLALIDITEQRQARRELELSERRFRILFDQSQDGMLLMRD--NRFVDCNPATLRLLGLIEKSQLIGQHAAAFSPERQPDGQLSFTLAQQYWEHALRWGHARFEWCRYRSNGEQFWEDVLLTAIPETDGHVVHASWRDITAEKESPRLMRESEEQLQMALTASEAGVWTIEYVTSEITWNERARSICGQPEAPSPAPLQFLQQAIHPDDREAVAAHLHRAA--TEEVPLDLEHRLIWPDGSIRYVSA 422          
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Match: A0A3C1FXM5_9BACT (Uncharacterized protein n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A3C1FXM5_9BACT)

HSP 1 Score: 107 bits (268), Expect = 2.580e-22
Identity = 59/129 (45.74%), Postives = 78/129 (60.47%), Query Frame = 0
Query:  185 ITDISARLEKEKLLRTSEERLMQAIRCTHAGIFDHDHIHGTVYWSPELYRIYDVEPSTPGSLAILNQRLHPDDREAVAAGLAKAGDPQNEGRFDGQHRIVWRNGEVRRLSARSQTLFTTVDGARVPSRT 313
            I DI+   + ++ LR SEERL QAIR + +GIFDHDH+ GT+YWSP    IY        +L      ++P+DRE +AA +  A DP  +G FD +HRI+ R G +R L+ RSQT F    GAR   RT
Sbjct:  124 IRDITETKKVDEALRESEERLRQAIRVSQSGIFDHDHLTGTIYWSPLQREIYGWGADETVTLQAFLDCVYPEDRERIAAAVRCAHDPAGDGLFDVEHRIIRRGGAIRWLTTRSQTFFDGEGGARQKVRT 252          
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Match: A0A350M545_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A350M545_9FLAO)

HSP 1 Score: 102 bits (253), Expect = 2.160e-21
Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 0
Query:  187 DISARLEKEKLLRTSEERLMQAIRCTHAGIFDHDHIHGTVYWSPELYRIYDVEPSTPGSLAILNQRLHPDDREAVAAGLAKAGDPQNEGRFDGQHRIVWRNGEVRRLSARSQTLFTTVDGARVP 310
            +I  R + E  LRTSE+R+ QA+R  + GIFDHDHI  T++WSPE  + Y +      +L +  +++ PDDRE +A  + +A DP  +G FD  HRI  R+G VR ++ RSQT F   DG  +P
Sbjct:  159 EIIERKKTEDALRTSEDRVQQAVRVANIGIFDHDHISDTIFWSPEQRKHYGLGIDETVTLELFLEQVFPDDREQIANAVRRAHDPAGDGLFDVTHRIFRRDGTVRWITTRSQTFFVG-DGXVLP 281          
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Match: A0A7C5R2Q7_9PLAN (PAS domain S-box protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C5R2Q7_9PLAN)

HSP 1 Score: 104 bits (260), Expect = 2.710e-21
Identity = 71/218 (32.57%), Postives = 114/218 (52.29%), Query Frame = 0
Query:   22 DYRVNLPQLGLRWLRSEARPESLSDGDTLW-HGITTDITDRQLQQLAVEESKERLRLQMEYAPDAILTFDPGLNCFVDANPQAASMFEMPREQLLQLSWRDLSPRVQPGGSVPSEVGHEWVRRAHAGESVTFQWVFQLRSGSTFSGEVRLNQMPHHGVQLVRVSITDISARLEKEKLLRTSEERLMQAIRCTHAGIFDHDHIHGTVYWSPELYRIYDV 238
            D   N+ Q   R+      P   ++G+ +    +  D+T R+  +LA +ES+E+LR  +E AP+AIL +D     FV AN  AA +F +  ++LLQ S   LSP  QP G    E+   +++RA  G++V+F+W  +   G     EV L ++P  G +L+R S+ DI+ R   E+ LR  E  L++++          D+I  +VY+  E  R   V
Sbjct:  152 DVEENIVQGKKRYFEVRKTPVHNAEGEVIGIQAVFWDVTARRKAELAAKESQEQLRALVESAPEAILIYDVDEQKFVRANKNAARLFHLGLDELLQTSPWQLSPPTQPDGQDSKELAKYYIQRALQGKTVSFEWTHRTAKGRDIPCEVMLTRLPSRGRRLLRASVFDITQRKTAERELRY-ERYLLRSLL---------DNIPDSVYFKDEHSRFLRV 359          
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Match: A0A7C2JTD4_9GAMM (Histidine kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C2JTD4_9GAMM)

HSP 1 Score: 103 bits (256), Expect = 9.690e-21
Identity = 59/137 (43.07%), Postives = 80/137 (58.39%), Query Frame = 0
Query:  177 GVQLVRVSITDISARLEKEKLLRTSEERLMQAIRCTHAGIFDHDHIHGTVYWSPELYRIYDVEPSTPGSLAILNQRLHPDDREAVAAGLAKAGDPQNEGRFDGQHRIVWRNGEVRRLSARSQTLFTTVDGARVPSRT 313
            G +LV V + DI+AR + E+ L   E +L  A R    G+FDHDH     YWS    +I+D+ P  P  L +L  +L+PDDRE +   +A A DP  +GRF  ++RI  R+GEVR + AR+QTLF      R P RT
Sbjct:  132 GTRLVGVCL-DITARKQAEERLARREVQLDLATRIVGVGVFDHDHTASCTYWSDHFRKIHDMPPDVPPDLGLLGAQLYPDDREPLQEAVAAAHDPAGDGRFSLEYRIRRRDGEVRWIVARAQTLFVGEGKDRHPVRT 267          
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Match: A0A7J3J9P5_9ARCH (Response regulator n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7J3J9P5_9ARCH)

HSP 1 Score: 100 bits (249), Expect = 8.360e-20
Identity = 68/212 (32.08%), Postives = 108/212 (50.94%), Query Frame = 0
Query:    6 LQSLQESAHPLSPWQCDYRVNLPQLGLRWLRSEARPESLSDGDTLWHGITTDITDRQLQQLAVEESKERLRLQMEYAPDAILTFDPGLNCFVDANPQAASMFEMPREQLLQLSWRDLSPRVQPGGSVPSEVGHEWVRRAHAGESVTFQWVFQLRSGSTFSGEVRLNQMPH-HGVQLVRVSITDISARLEKEKLLRTSEERLMQAIRCTHAGI 216
            ++S+++SA  L+PWQC+YRV LP  G+ W+  ++ PE L+DG  +W G  TDIT+R+  + A+ +S+ R R   E + D I+   P     + ANPQA  M  M  E++ +     +   VQ G    + +  +   R  A      +  F+ + G+TF GEV  N     +G ++  V I DI+     E  LR + E L +      AG+
Sbjct:  218 IKSIEDSAQHLTPWQCEYRVRLPD-GIHWMWGQSTPEKLADGRIVWSGFNTDITERKKAEEALAQSEARYRSLYENSFDGIMLSKPD-GTILAANPQACRMLGMTEEEIKKAGRDGIV--VQNGNQALALLESDRTGRVRA------ELTFKRKDGTTFIGEVSSNAFTDINGEKVKSVLIRDITESKNAEDRLRGTFEILEKVSEGIDAGL 419          
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Match: UPI00118516A4 (PAS domain S-box protein n=1 Tax=Ideonella sp. A 288 TaxID=1962181 RepID=UPI00118516A4)

HSP 1 Score: 99.0 bits (245), Expect = 3.230e-19
Identity = 88/333 (26.43%), Postives = 151/333 (45.35%), Query Frame = 0
Query:    1 DRGHFLQSLQESAHPLSPWQCD--YRVNLPQLGLRWLRSEARPESLSDGD----TLWHGITTDITDRQLQQLAVEESKERLRLQMEYAPDAILTFDPGLNCFVDANPQAASMFEMPREQ------LLQLSWRDLSPRV--------QPGGSVPSEVGHEWVRRAHAGESVTFQWVFQLRSGSTFSGEVRLNQMPHHGVQLVRVSITDISARLEKEKLLRTSEERLMQAIRCTHAGIFDHDHIHGTVYWSPELYRIYDVEPSTPGSLAILNQRLHPDDREAVAAGLAKAGDPQNEGRFDGQHRIVWRNGEVRRLSARSQTLFTTVDGARVPSRT 313
            DR     +++ +  P      D  +R+  P   +RWL + A+     +G         G   DIT+R+  + A+  S+ RL   ++ +   I   D      V  +P    M     +Q      ++ ++  +   R+         P G    +  H   RR         +W+  +R+ + F+GE        H V+ V   + DI+ R + E+ LR SE RL + ++ ++ GIFDHDH+ G +YWSPE   ++      P ++A + +    +DR+  AA + +A DP  +GR++ + RI  R+G +R L + +QTLF      R P RT
Sbjct:  968 DREELAAAIRRAHDPAGDGVLDIEHRIRRPDGAVRWLSARAQTFFAGEGADRRAVRTVGGAIDITERREAEEALRRSERRLTQAVQASNTGIFEHDHASGA-VYCSPHHRIMNGWSADQPISVADIVAVTLAEDRDRLGAAIMRSHDPAGDGALDAEHRIRRR-----DGVVRWL-SVRALTYFAGE----GAERHPVRTVG-GVIDITERRKAEEALRLSEGRLTRVVQASNTGIFDHDHVSGEIYWSPEYRAMHGRSADEPITIASVAEATLVEDRDRFAAAIKRAHDPAGDGRYEIEFRIRRRDGTLRCLRSSAQTLFAGEGTERHPVRT 1288          
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Match: A0A8J7J2Z7_9DELT (Histidine kinase n=1 Tax=Geomesophilobacter sediminis TaxID=2798584 RepID=A0A8J7J2Z7_9DELT)

HSP 1 Score: 98.6 bits (244), Expect = 3.900e-19
Identity = 54/121 (44.63%), Postives = 73/121 (60.33%), Query Frame = 0
Query:  193 EKEKLLRTSEERLMQAIRCTHAGIFDHDHIHGTVYWSPELYRIYDVEPSTPGSLAILNQRLHPDDREAVAAGLAKAGDPQNEGRFDGQHRIVWRNGEVRRLSARSQTLFTTVDGARVPSRT 313
            + E +LR SEER  QAI  ++ G+FDHDH   TVYWSP L  I          +A     LHPDDR+A+AA +A+A DP  +G +D +HRI+  +G VR L+A+++T F      R P RT
Sbjct:  365 QMEAILRLSEERTRQAISASNLGVFDHDHRSDTVYWSPRLREINGWNADQAMGVADFINILHPDDRDAIAASVARAHDPAGDGIWDVEHRIIRGDGAVRWLTAQARTFFEGDGTIRRPVRT 485          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100427.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V2Q9S5_9CHLR8.120e-2731.46Histidine kinase n=2 Tax=Chloroflexi TaxID=200795 ... [more]
A0A0G3BCW8_9BURK1.490e-2332.73Histidine kinase n=2 Tax=Schlegelella brevitalea T... [more]
UPI001669E0694.500e-2329.88PAS domain S-box protein n=1 Tax=Hymenobacter glac... [more]
A0A3C1FXM5_9BACT2.580e-2245.74Uncharacterized protein n=1 Tax=Nitrospiraceae bac... [more]
A0A350M545_9FLAO2.160e-2143.55Uncharacterized protein n=1 Tax=Flavobacteriales b... [more]
A0A7C5R2Q7_9PLAN2.710e-2132.57PAS domain S-box protein (Fragment) n=1 Tax=Planct... [more]
A0A7C2JTD4_9GAMM9.690e-2143.07Histidine kinase n=1 Tax=Gammaproteobacteria bacte... [more]
A0A7J3J9P5_9ARCH8.360e-2032.08Response regulator n=1 Tax=Candidatus Bathyarchaeo... [more]
UPI00118516A43.230e-1926.43PAS domain S-box protein n=1 Tax=Ideonella sp. A 2... [more]
A0A8J7J2Z7_9DELT3.900e-1944.63Histidine kinase n=1 Tax=Geomesophilobacter sedimi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainSMARTSM00091pas_2coord: 73..140
e-value: 1.5
score: 17.5
coord: 203..270
e-value: 0.031
score: 23.4
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 69..196
e-value: 7.8E-8
score: 30.5
IPR000014PAS domainCDDcd00130PAScoord: 82..188
e-value: 6.11179E-5
score: 39.5387
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 1..59
e-value: 2.4E-7
score: 32.9
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 196..311
e-value: 3.7E-20
score: 74.2
NoneNo IPR availableGENE3D3.30.450.20PAS domaincoord: 60..188
e-value: 7.2E-18
score: 66.7
IPR013655PAS fold-3PFAMPF08447PAS_3coord: 226..300
e-value: 3.2E-9
score: 37.0
IPR013656PAS fold-4PFAMPF08448PAS_4coord: 82..191
e-value: 2.8E-6
score: 27.6
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 188..301
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 58..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100427contigL-digitata_M_contig100427:1..939 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100427.1.1mRNA_L-digitata_M_contig100427.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100427 1..939 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100427.1.1 ID=prot_L-digitata_M_contig100427.1.1|Name=mRNA_L-digitata_M_contig100427.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=313bp
DRGHFLQSLQESAHPLSPWQCDYRVNLPQLGLRWLRSEARPESLSDGDTL
WHGITTDITDRQLQQLAVEESKERLRLQMEYAPDAILTFDPGLNCFVDAN
PQAASMFEMPREQLLQLSWRDLSPRVQPGGSVPSEVGHEWVRRAHAGESV
TFQWVFQLRSGSTFSGEVRLNQMPHHGVQLVRVSITDISARLEKEKLLRT
SEERLMQAIRCTHAGIFDHDHIHGTVYWSPELYRIYDVEPSTPGSLAILN
QRLHPDDREAVAAGLAKAGDPQNEGRFDGQHRIVWRNGEVRRLSARSQTL
FTTVDGARVPSRT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR013655PAS_fold_3
IPR013656PAS_4
IPR035965PAS-like_dom_sf