prot_L-digitata_M_contig10040.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10040.1.1
Unique Nameprot_L-digitata_M_contig10040.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length72
Homology
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Match: A0A6H5K685_9PHAE (BRAP2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K685_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.510e-32
Identity = 56/67 (83.58%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    2 LPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPSDPARTPAEYMVLLQMESQ 68
            LP+RR  LLC+LSVPAHMVPTD+L F APFKE VHS+RILRPCNPV PSDPA+TPAEYMVLLQMESQ
Sbjct:   83 LPQRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQ 149          
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Match: D7FPZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ1_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.430e-29
Identity = 56/67 (83.58%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    2 LPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPSDPARTPAEYMVLLQMESQ 68
            LP+RR  LLC+LSVPAHMVPTD+L F APFKE VHS+RILRPCNPV PSDPA+TPAEYMVLLQMESQ
Sbjct:   84 LPQRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQ 150          
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Match: A0A835YPP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP8_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.850e-13
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    1 QLPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPSDPARTPAEYMVLLQMESQ 68
            QLP+ R  LLC+ S+PAHMVPTD+LQ  APF++ +  VRILRPC   R SD  R   EYMV+LQM +Q
Sbjct:  213 QLPEGRGCLLCITSMPAHMVPTDMLQLFAPFRQSMSYVRILRPC---RGSDSERL--EYMVVLQMLNQ 275          
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Match: A0A833TQ33_PHYIN (Zn-finger in ubiquitin-hydrolases and other protein n=34 Tax=Phytophthora TaxID=4783 RepID=A0A833TQ33_PHYIN)

HSP 1 Score: 61.6 bits (148), Expect = 2.150e-9
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 QLPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPSDPARTPAEYMVLLQMESQVR 70
            QLPK RSTL+CV++VP+HM P ++L+F A F+E +  VRIL+        DP R+    MVL+Q  SQ R
Sbjct:   66 QLPKERSTLVCVVTVPSHMSPVEILEFLASFREDIALVRILK--------DPERS--NCMVLMQFNSQER 125          
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Match: W2PVR5_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PVR5_PHYPN)

HSP 1 Score: 59.7 bits (143), Expect = 9.920e-9
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    1 QLPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPSDPARTPAEYMVLLQMESQVR 70
            QLP  RSTL+CV++VP+HM P ++L+F A F+E +  VRIL+        DP R+    MVL+Q  SQ R
Sbjct:   69 QLPNERSTLVCVVTVPSHMSPVEILEFLASFREDIALVRILK--------DPERS--NCMVLMQFNSQER 128          
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Match: H3GNL2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNL2_PHYRM)

HSP 1 Score: 58.2 bits (139), Expect = 3.580e-8
Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    1 QLPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPSDPARTPAEYMVLLQMESQVR 70
            QLP  RSTL+CV++VP+HM P ++L+F A F++ +  VRIL+        DP R+    MVL+Q  SQ R
Sbjct:   69 QLPTERSTLVCVVTVPSHMSPVEILEFLASFRQDIALVRILK--------DPERS--NCMVLMQFNSQER 128          
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Match: A0A3F2RYB5_9STRA (UBP-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYB5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 4.970e-8
Identity = 32/70 (45.71%), Postives = 44/70 (62.86%), Query Frame = 0
Query:    1 QLPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPSDPARTPAEYMVLLQMESQVR 70
            QLP  RS L+CV++VP+HM P ++L+F A F+E +  VRIL+        DP R+    MVL+Q  SQ R
Sbjct:   74 QLPNERSALVCVVTVPSHMSPVEILEFLASFREDIALVRILK--------DPERS--NCMVLMQFNSQER 133          
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Match: A0A5D6XNV3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNV3_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 6.710e-8
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    2 LPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPSDPARTPAEYMVLLQMESQVR 70
            LP+ R+TLLC+++VP+HM P +LL+F A F+  V SVR+L+        DP R+    M LLQ  SQ R
Sbjct:  109 LPRERNTLLCIVTVPSHMAPVELLEFLAGFRADVASVRVLQ--------DPDRS--NCMALLQFASQER 167          
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Match: K3W6P2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6P2_GLOUD)

HSP 1 Score: 56.2 bits (134), Expect = 1.710e-7
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    1 QLPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPSDPARTPAEYMVLLQMESQVR 70
            QLP  R+TLLC+++VP+HM P +LL+F A F++ + SVR+L+        DP R+    M LLQ  +Q R
Sbjct:  113 QLPHERNTLLCIVTVPSHMSPVELLEFLAGFRDDIASVRVLQ--------DPDRS--NCMALLQFVTQDR 172          
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Match: A0A3M6VJ33_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJ33_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 4.370e-7
Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 0
Query:    2 LPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPSDPARTPAEYMVLLQMESQVR 70
            LP  RS L+CV++VP+HM P D+L F   F+E +  VRIL+        DP R     MVL+Q +SQ R
Sbjct:   62 LPSERSALVCVVTVPSHMSPVDILDFLTSFREDIALVRILK--------DPERN--NCMVLMQFKSQER 120          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10040.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5K685_9PHAE2.510e-3283.58BRAP2 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FPZ1_ECTSI1.430e-2983.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YPP8_9STRA1.850e-1358.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A833TQ33_PHYIN2.150e-948.57Zn-finger in ubiquitin-hydrolases and other protei... [more]
W2PVR5_PHYPN9.920e-947.14Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
H3GNL2_PHYRM3.580e-845.71Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3F2RYB5_9STRA4.970e-845.71UBP-type domain-containing protein n=3 Tax=Phytoph... [more]
A0A5D6XNV3_9STRA6.710e-846.38Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3W6P2_GLOUD1.710e-744.29Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3M6VJ33_9STRA4.370e-744.93Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011422BRCA1-associated 2PFAMPF07576BRAP2coord: 2..68
e-value: 1.0E-12
score: 48.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10040contigL-digitata_M_contig10040:717..932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10040.1.1mRNA_L-digitata_M_contig10040.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10040 717..932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10040.1.1 ID=prot_L-digitata_M_contig10040.1.1|Name=mRNA_L-digitata_M_contig10040.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=72bp
QLPKRRSTLLCVLSVPAHMVPTDLLQFTAPFKEHVHSVRILRPCNPVRPS
DPARTPAEYMVLLQMESQVRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011422BRAP2