prot_L-digitata_M_contig100310.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig100310.1.1
Unique Nameprot_L-digitata_M_contig100310.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length116
Homology
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Match: D7FP69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP69_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 5.770e-40
Identity = 104/116 (89.66%), Postives = 107/116 (92.24%), Query Frame = 0
Query:    1 MQVPWHPRVSEVESTLARKVYERVTRERERELRGDRWRSVKIGAAMIGGGTLLAVTGGLAAPXXXXXXXXXXXXXXXXXXXXXXXFATTAWMATVFGAGGAGLVGYKMDRRTQGVK 116
            MQV WHPRVSEVESTLARKVYERV R+RERELR DRWR  KIGAAMIGGGTLLAVTGGLA  XXXXXXXXXXXXXXXXXXXXX  FATTAWMAT+FGAGGAGLVGYKMDRRT+GVK
Sbjct:  132 MQVRWHPRVSEVESTLARKVYERVARDRERELRTDRWRGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVK 247          
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Match: W7TZH7_9STRA (Uncharacterized protein n=5 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZH7_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.380e-8
Identity = 45/111 (40.54%), Postives = 58/111 (52.25%), Query Frame = 0
Query:    2 QVPWHPRVSEVESTLARKVYERVTRERERELRGDRWRSVKIGAAMIGGGTLLAVTGGLAAPXXXXXXXXXXXXXXXXXXXXXXXFATTAWMATVFGAGGAGLVGYKMDRRT 112
            ++ W   ++ VE+  A  +YE     +E+E      R  KI AA +GGG LLA+TGGLAAP                         +TA +AT+FGA GAGLVGYKM RRT
Sbjct:  172 EISWR-NIACVEAFTASYLYEIWEARQEKEKINKGLRYAKITAAAVGGGALLALTGGLAAPAIGIGLSAMSATGAVVAG-----LTSTASVATLFGASGAGLVGYKMRRRT 276          
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Match: T0QKH0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QKH0_SAPDV)

HSP 1 Score: 58.9 bits (141), Expect = 9.740e-8
Identity = 50/121 (41.32%), Postives = 62/121 (51.24%), Query Frame = 0
Query:    2 QVPWHPRVSEVESTLARKVYERVTRERERELR-----GDRWRSVKIGAAMIGGGTLLAVTGGLAAPXXXXXXXXXXXXXXXXXXXXXXXFATTAWMATV-FGAGGAGLVGYKMDRRTQGVK 116
            ++PW    SE ES L   ++      + R++      GD  R++KIG A + GGTLLA+TGGL AP                 XXX      TA  ATV FG  GAGL GYK DRRT G+K
Sbjct:  184 ELPWTVIASE-ESALGMALFLEANELKSRKVESPRRWGDWKRNLKIGTAAVAGGTLLALTGGLVAPALAAGFTALGGVGAVVGXXXASAGGVTA--ATVLFGTAGAGLAGYKTDRRTSGIK 301          
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Match: A0A1V9YBI8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YBI8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.320e-7
Identity = 46/119 (38.66%), Postives = 61/119 (51.26%), Query Frame = 0
Query:    3 VPWHPRVSEVESTLARKVYERVTRERERELR-----GDRWRSVKIGAAMIGGGTLLAVTGGLAAPXXXXXXXXXXXXXXXXXXXXXXXFATTAWMATVFGAGGAGLVGYKMDRRTQGVK 116
            +PW    SE E+ L   ++   T  + R++      GD  R++KIG A + GGTLLA+TGGL AP                  XX      TA  + +FG  GAGLVG+K DRRT G+K
Sbjct:  168 LPWAVIASE-EAALGMALFLEATELKSRKVASPRRWGDWKRNLKIGTAAVAGGTLLALTGGLVAPALAAGFTALGGVGAVVGTXXGSAGGITA-ASVLFGTAGAGLVGFKTDRRTSGIK 284          
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Match: A0A024G2C1_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G2C1_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.170e-6
Identity = 41/122 (33.61%), Postives = 64/122 (52.46%), Query Frame = 0
Query:    1 MQVPWHPRVSEVESTLARKVYERVTRERERELRGDR-----W-RSVKIGAAMIGGGTLLAVTGGLAAPXXXXXXXXXXXXXXXXXXXXXXXFATTAWMATVFGAGGAGLVGYKMDRRTQGVK 116
            M++ W  +V E E+ + R++Y    +  +++  G +     W R++ IGAA + GGTLLAVTGGLAAP                          TA  + +FG  GA ++G+K D+RT+GV+
Sbjct:  135 MEISWS-KVIEEETIIGRELYAEAMKISKKKFGGQKKGIWNWKRNMAIGAAAVTGGTLLAVTGGLAAPAISASLAVFGTTGAAIGTAIGSTAGVTA-TSILFGTTGASVIGFKTDKRTRGVQ 254          
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Match: A0A7S4T9W3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T9W3_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.020e-6
Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   26 RERERELRGDRWRSVKIGAAMIGGGTLLAVTGGLAAPXXXXXXXXXXXXXXXXXXXXXXXFATTAWMATVFGAGGAGLVGYKMDRRTQGV 115
            R+RE+  R    R +KIG A +  GTLLAVTGGLAAP      XXXXXX            A+TA ++TVFG GG  LV  KMD+RT+G+
Sbjct:  373 RKREKTNRQKVIRGLKIGTAGVVAGTLLAVTGGLAAPAVAAGIXXXXXXTVIATVATIA-LASTAAVSTVFGVGGGALVAAKMDKRTRGL 461          
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Match: A0A1W0AA63_9STRA (B2-adapt-app_C domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AA63_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.320e-6
Identity = 47/120 (39.17%), Postives = 64/120 (53.33%), Query Frame = 0
Query:    2 QVPWHPRVSEVESTLARKVYERVTRERERELRGDR----W-RSVKIGAAMIGGGTLLAVTGGLAAPXXXXXXXXXXXXXXXXXXXXXXXFATTAWMATVFGAGGAGLVGYKMDRRTQGVK 116
            ++PW   +++ ES +   ++  V   + R++   R    W R++KIG A + GGTLLA+TGGL AP                XXXXXXX         +FG  GAGL GYK DRRT G+K
Sbjct:  178 ELPWSV-ITKEESAIGMALFLEVNELKSRKVESPRKWNDWKRNLKIGTAAVAGGTLLALTGGLVAPALAAGFTALGGVGAVVXXXXXXXXXXXX-XTVLFGTAGAGLAGYKTDRRTSGIK 295          
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Match: A0A485KQD1_9STRA (Aste57867_10253 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQD1_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 7.570e-6
Identity = 48/121 (39.67%), Postives = 60/121 (49.59%), Query Frame = 0
Query:    3 VPWHPRVSEVESTLAR----KVYERVTRERERELR--GDRWRSVKIGAAMIGGGTLLAVTGGLAAPXXXXXXXXXXXXXXXXXXXXXXXFATTAWMATV-FGAGGAGLVGYKMDRRTQGVK 116
            +PW    +E E  LAR    + +E  TR++    R  GD  R++ IG A + GGTLLA+TGGLA P                          TA  ATV FG  GAGL G+K DRRT G+K
Sbjct:  197 IPWSAIAAE-EVELARALLLEAHELQTRKKVASPRKWGDWRRNLAIGGAAVAGGTLLALTGGLALPVLASGFSLLGTAGAAVGGALMTSGGITA--ATVLFGTAGAGLAGFKADRRTVGIK 314          
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Match: A0A6P3VUL9_CLUHA (transmembrane and coiled-coil domain-containing protein 4 n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3VUL9_CLUHA)

HSP 1 Score: 52.8 bits (125), Expect = 1.420e-5
Identity = 54/90 (60.00%), Postives = 68/90 (75.56%), Query Frame = 0
Query:   28 RERELRGDRWRS-VKIGAAMIGGGTLLAVTGGLAAPXXXXXXXXXXXXXXXXXXXXXXXFATTAWMATVFGAGGAGLVGYKMDRRTQGVK 116
            R+++ RG +WR  + IG A +GGGT++ VTGGLAAP   XXXXXXXXXXXXXXXXXXXX      MA++FGA GAGL GYKM++R   ++
Sbjct:  173 RQKKERGRKWRRYLLIGLATVGGGTVIGVTGGLAAPLVAXXXXXXXXXXXXXXXXXXXXXXI---MASLFGAAGAGLTGYKMNKRVGAIE 259          
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Match: U6H6D0_9EIME (Uncharacterized protein n=1 Tax=Eimeria praecox TaxID=51316 RepID=U6H6D0_9EIME)

HSP 1 Score: 52.4 bits (124), Expect = 2.000e-5
Identity = 39/80 (48.75%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   37 WRSVKIGAAMIGGGTLLAVTGGLAAPXXXXXXXXXXXXXXXXXXXXXXXFATTAWMATVFGAGGAGLVGYKMDRRTQGVK 116
            WR +KI  A +GGG LLA+T GLAAP               XXXXXXXX A    + ++FGAGGAGL G+K  RR   +K
Sbjct:  938 WRRLKIAGAAVGGGVLLALTAGLAAPGIAAAVASLGSLPLSXXXXXXXXMAA---LVSIFGAGGAGLTGWKYSRRIANIK 1014          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100310.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP69_ECTSI5.770e-4089.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TZH7_9STRA5.380e-840.54Uncharacterized protein n=5 Tax=Nannochloropsis ga... [more]
T0QKH0_SAPDV9.740e-841.32Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YBI8_9STRA1.320e-738.66Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A024G2C1_9STRA1.170e-633.61Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
A0A7S4T9W3_9STRA3.020e-650.00Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A1W0AA63_9STRA4.320e-639.17B2-adapt-app_C domain-containing protein n=1 Tax=T... [more]
A0A485KQD1_9STRA7.570e-639.67Aste57867_10253 protein n=1 Tax=Aphanomyces stella... [more]
A0A6P3VUL9_CLUHA1.420e-560.00transmembrane and coiled-coil domain-containing pr... [more]
U6H6D0_9EIME2.000e-548.75Uncharacterized protein n=1 Tax=Eimeria praecox Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007941Protein of unknown function DUF726PFAMPF05277DUF726coord: 36..116
e-value: 1.4E-15
score: 57.1
IPR007941Protein of unknown function DUF726PANTHERPTHR17920TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4coord: 12..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100310contigL-digitata_M_contig100310:459..806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100310.1.1mRNA_L-digitata_M_contig100310.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig100310 459..836 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig100310.1.1 ID=prot_L-digitata_M_contig100310.1.1|Name=mRNA_L-digitata_M_contig100310.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=116bp
MQVPWHPRVSEVESTLARKVYERVTRERERELRGDRWRSVKIGAAMIGGG
TLLAVTGGLAAPAFAAGLAATSSVIGASAAATLSGFATTAWMATVFGAGG
AGLVGYKMDRRTQGVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007941DUF726