prot_L-digitata_M_contig10028.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10028.1.1
Unique Nameprot_L-digitata_M_contig10028.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length126
Homology
BLAST of mRNA_L-digitata_M_contig10028.1.1 vs. uniprot
Match: D7FZ23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ23_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 2.520e-56
Identity = 98/125 (78.40%), Postives = 109/125 (87.20%), Query Frame = 0
Query:    1 LHVRSCSRLAWSAALATTGAFIAVSPNNAPRDEYLALFRRNMGLLGASLVGPAVYSFLLYDGSKANINTYVRVITFGFTWGYLITFALELIVATGFQLLVLAAMEPAAFKLTPRVPAIFLPWVLR 125
            L +RS SR+  +A +AT GAF+AVSPNNAPRD YLALFRRN+GL+ ASLVGPAVYSFLLYDGSKANINTYVRV+TF FTWGYLI+FALE++ AT FQL VLA MEP AF LTP VPAIFLPWVLR
Sbjct:  444 LTLRSWSRIMGAAGIATAGAFLAVSPNNAPRDLYLALFRRNLGLIAASLVGPAVYSFLLYDGSKANINTYVRVVTFAFTWGYLISFALEIVAATSFQLCVLAVMEPKAFDLTPHVPAIFLPWVLR 568          
BLAST of mRNA_L-digitata_M_contig10028.1.1 vs. uniprot
Match: A0A6H5L6A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A5_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 5.140e-53
Identity = 96/125 (76.80%), Postives = 107/125 (85.60%), Query Frame = 0
Query:    1 LHVRSCSRLAWSAALATTGAFIAVSPNNAPRDEYLALFRRNMGLLGASLVGPAVYSFLLYDGSKANINTYVRVITFGFTWGYLITFALELIVATGFQLLVLAAMEPAAFKLTPRVPAIFLPWVLR 125
            L +RS SR+  +A +AT GAF+AVSPNNA RD YLALFRRN+GL+ ASLVGPAVYS LLYDGSKANINTYVRV+TF FTWGYLI+FALE++ AT FQL VLA MEP AF LTP VPAIFLPWVLR
Sbjct:  599 LTLRSWSRITGAAGIATAGAFLAVSPNNAARDLYLALFRRNLGLIAASLVGPAVYSCLLYDGSKANINTYVRVVTFAFTWGYLISFALEIVAATFFQLCVLAVMEPKAFDLTPHVPAIFLPWVLR 723          
BLAST of mRNA_L-digitata_M_contig10028.1.1 vs. uniprot
Match: A0A835YXW0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXW0_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.200e-27
Identity = 54/102 (52.94%), Postives = 71/102 (69.61%), Query Frame = 0
Query:   24 VSPNNAPRDEYLALFRRNMGLLGASLVGPAVYSFLLYDGSKANINTYVRVITFGFTWGYLITFALELIVATGFQLLVLAAMEPAAFKLTPRVPAIFLPWVLR 125
            VSP NAPR+ Y+ LF+RN+ LLG SLVGP ++   L+D SKA+ N  +      FTWGYL+T  LEL++ T +++ VL  MEP A+   P VPAI+LPWVLR
Sbjct:   88 VSPRNAPREVYMQLFQRNLLLLGTSLVGPGLFMLTLHDSSKASANAVISAFFHAFTWGYLLTVLLELVLTTVYRMAVLQVMEPQAYSACPDVPAIWLPWVLR 189          
BLAST of mRNA_L-digitata_M_contig10028.1.1 vs. uniprot
Match: B5YMS3_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMS3_THAPS)

HSP 1 Score: 90.1 bits (222), Expect = 1.770e-18
Identity = 50/121 (41.32%), Postives = 66/121 (54.55%), Query Frame = 0
Query:    5 SCSRLAWSAALATTGAFIAVSPNNAPRDEYLALFRRNMGLLGASLVGPAVYSFLLYDGSKANINTYVRVITFGFTWGYLITFALELIVATGFQLLVLAAMEPAAFKLTPRVPAIFLPWVLR 125
            S  ++A+S       ++ AVSP   P  EY  LF + +  +G S + P      +YDG   NINT +      FT GY + F LE+IV T  +L V    EPA F LTP+VP+I LPWVLR
Sbjct:  588 SLQKIAFSTIGVALLSYCAVSPRTLPFPEYNRLFLQTLSTVGLSAIIPLAMLMCVYDGKYNNINTIIGTFHVSFTLGYTLAFVLEIIVTTALRLGVFMIWEPAIFSLTPKVPSIILPWVLR 708          
BLAST of mRNA_L-digitata_M_contig10028.1.1 vs. uniprot
Match: A0A7S3Y3H7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3H7_HETAK)

HSP 1 Score: 81.6 bits (200), Expect = 1.490e-15
Identity = 51/123 (41.46%), Postives = 68/123 (55.28%), Query Frame = 0
Query:    1 LHVRSCSRLAWSAALATTGAFIAVSPNNAPRDEYLALFRRNMGLLGASLVGPAVYSFLLYDGSKANINTYVRVITFGFTWGYLITFALELIVATGFQLLVLAAMEPAAFKLTPRVPAIFLPWV 123
            L V S  RLA    L    +++AV P +AP+  Y    R N  LL  SL+GP     LLY     N N +++V   GF + Y + F  E I+AT F+L +   +E   FKL+P+VPAIFLPWV
Sbjct:  159 LSVGSAIRLALMTTLGIVLSYVAVVPYSAPQALYNIKVRENFTLLFLSLIGPLGIIGLLYSTKAVNFNMFIKVFHLGF-FSYFLVFISEYIMATFFRLGIFYWLEKDIFKLSPKVPAIFLPWV 280          
BLAST of mRNA_L-digitata_M_contig10028.1.1 vs. uniprot
Match: A0A7S1BAJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAJ9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 6.330e-14
Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 0
Query:    5 SCSRLAWSAALATTGAFIAVSPNNAPRDEYLALFRRNMGLLGASLVGPAVYSFLLYDGSKANINTYVRVITFGFTWGYLITFALELIVATGFQLLVLAAMEPAAFKLTPRVPAIFLPWVLR 125
            S  +L++  A     ++ AVSP + P  +Y   F+RN  L+  S +   +Y F ++D ++ +INT V      FT GY  +F  E+++AT  +L V    EP+ F LTP +P + LPWVLR
Sbjct:  150 SIQKLSFVLATTLLLSYCAVSPRSLPIIDYNDHFKRNCRLVAISALPSLLYCFCVFDHAENDINTIVGTFYTAFTVGYAGSFVSEIVLATLLRLGVFRIWEPSIFDLTPEIPVVVLPWVLR 270          
BLAST of mRNA_L-digitata_M_contig10028.1.1 vs. uniprot
Match: A0A7S2A2U6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2U6_TRICV)

HSP 1 Score: 76.6 bits (187), Expect = 8.370e-14
Identity = 45/114 (39.47%), Postives = 65/114 (57.02%), Query Frame = 0
Query:   15 LATTGAFI---AVSPNNAPRDEYLALFRRNMGLLGASLVGPAVYSFLLYDGSKANINTYVRVITFGFTWGYLITFALELIVATGFQLLVLAAMEPAAFKLTPRVPAIFLPWVLR 125
            LA   AF+   AVSP + P + Y A F RN+ +    LV P     L++D  + +IN+ +       T GY+ TF LE+++ T  +L V A  EP+ F +TP+VP + LPWVLR
Sbjct:  169 LALGSAFLCYSAVSPLSLPDEPYNAEFLRNLRVSSLVLVTPLFLFSLVFDPKQNDINSVIGTFYTSCTVGYVSTFLLEILLTTALRLAVFAMWEPSIFSMTPKVPTVVLPWVLR 282          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10028.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FZ23_ECTSI2.520e-5678.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6A5_9PHAE5.140e-5376.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YXW0_9STRA3.200e-2752.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B5YMS3_THAPS1.770e-1841.32Predicted protein (Fragment) n=1 Tax=Thalassiosira... [more]
A0A7S3Y3H7_HETAK1.490e-1541.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1BAJ9_9STRA6.330e-1436.36Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2A2U6_TRICV8.370e-1439.47Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10028contigL-digitata_M_contig10028:820..5730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10028.1.1mRNA_L-digitata_M_contig10028.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10028 820..5730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10028.1.1 ID=prot_L-digitata_M_contig10028.1.1|Name=mRNA_L-digitata_M_contig10028.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=126bp
LHVRSCSRLAWSAALATTGAFIAVSPNNAPRDEYLALFRRNMGLLGASLV
GPAVYSFLLYDGSKANINTYVRVITFGFTWGYLITFALELIVATGFQLLV
LAAMEPAAFKLTPRVPAIFLPWVLR*
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